Summary of Study ST000160
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000139. The data can be accessed directly via it's Project DOI: 10.21228/M80P49 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
| Study ID | ST000160 |
| Study Title | Basic Metabolism Studies (wt and TPA null) |
| Study Summary | compare basic metabolism between wildtype and tPA null mice in brain tissue |
| Institute | University of Michigan |
| Department | Biomedical Research Core Facilities |
| Laboratory | Metabolomics core |
| Last Name | Kachman |
| First Name | Maureen |
| Address | 6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714 |
| mkachman@umich.edu | |
| Submit Date | 2014-11-11 |
| Num Groups | 1 |
| Total Subjects | 10 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | d |
| Uploaded File Size | 114 M |
| Analysis Type Detail | LC-MS |
| Release Date | 2015-04-28 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Project:
| Project ID: | PR000139 |
| Project DOI: | doi: 10.21228/M80P49 |
| Project Title: | Basic Metabolism Studies |
| Project Summary: | Comparing basic metabolism |
| Institute: | University of Michigan |
| Department: | Internal Medicine/Cardiology |
| Laboratory: | Lawrence Lab |
| Last Name: | Lawrence |
| First Name: | Daniel |
| Address: | Ann Arbor, MI |
| Email: | dlawrenc@umich.edu |
| Phone: | 734-763-7838 |
Subject:
| Subject ID: | SU000179 |
| Subject Type: | Animal |
| Subject Species: | Mus musculus |
| Taxonomy ID: | 10090 |
| Species Group: | Mammal |
Factors:
Subject type: Animal; Subject species: Mus musculus (Factor headings shown in green)
| mb_sample_id | local_sample_id | Tissue type |
|---|---|---|
| SA008577 | S00016759 | brain |
| SA008578 | S00016760 | brain |
| SA008579 | S00016761 | brain |
| SA008580 | S00016762 | brain |
| SA008581 | S00016758 | brain |
| SA008582 | S00016757 | brain |
| SA008583 | S00016754 | brain |
| SA008584 | S00016755 | brain |
| SA008585 | S00016756 | brain |
| SA008586 | S00016753 | brain |
| Showing results 1 to 10 of 10 |
Collection:
| Collection ID: | CO000165 |
| Collection Summary: | - |
| Sample Type: | Brain |
Treatment:
| Treatment ID: | TR000185 |
Sample Preparation:
| Sampleprep ID: | SP000179 |
| Sampleprep Summary: | - |
| Sampleprep Protocol Filename: | Acyl-carnitines_analysis_protocol-2015-03-11.docx |
Combined analysis:
| Analysis ID | AN000252 |
|---|---|
| Analysis type | MS |
| Chromatography type | Reversed phase |
| Chromatography system | Agilent 1260 |
| Column | Waters XBridge C18 (50 x 2.1mm,3um) |
| MS Type | ESI |
| MS instrument type | QTOF |
| MS instrument name | Agilent 6530 QTOF |
| Ion Mode | POSITIVE |
| Units | Std. response ratio |
Chromatography:
| Chromatography ID: | CH000177 |
| Methods ID: | AQM040 |
| Methods Filename: | QM-004-Xbridg2mm_ACar+_MRM-Insert.m |
| Instrument Name: | Agilent 1260 |
| Column Name: | Waters XBridge C18 (50 x 2.1mm,3um) |
| Chromatography Type: | Reversed phase |
MS:
| MS ID: | MS000202 |
| Analysis ID: | AN000252 |
| Instrument Name: | Agilent 6530 QTOF |
| Instrument Type: | QTOF |
| MS Type: | ESI |
| Ion Mode: | POSITIVE |
| Acquisition Parameters File: | QM-004-Xbridg2mm_ACar+_MRM-Insert.m |
| Processing Parameters File: | EX00374-AcylCarnitines-Quant.m |
