Summary of study ST000119

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000106. The data can be accessed directly via it's Project DOI: 10.21228/M8RC75 This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

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Study IDST000119
Study TitleMetabolomics analysis of multiple metabolic functions in the YjgF/YER057c/UK114 (Rid) protein family LCMS
Study Typewildtype vs knock-out
Study SummaryMetabolomics analysis of wild-type S. enterica, single RidA knock-out and triple Rid (ridA Rid2 Rid7) knock-out S.enterica cells
Institute
University of California, Davis
DepartmentGenome and Biomedical Sciences Facility
LaboratoryFiehn Laboratory
Last NameElBadawi-Sidhu
First NameMona
Address451 Health Sciences Drive, Davis, California 95616, USA
Emailmmelbadawi@ucdavis.edu
Submit Date2014-11-06
Num Groups4
Total Subjects6
Study CommentsSamples were measured in poitive and negative ionization mode. MS/MS files contain product ion scans (MS/MS) spectra for compound identification.
Raw Data AvailableNo
Analysis Type DetailLC-MS
Release Date2014-11-06
Release Version1
Mona ElBadawi-Sidhu Mona ElBadawi-Sidhu
https://dx.doi.org/10.21228/M8RC75
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

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Factors:

Subject type: Bacterial cells; Subject species: Salmonella enterica;Escherichia coli (Factor headings shown in green)

mb_sample_id local_sample_id Strain Genotype
SA006213041113_EcoliCells_WT_R1_0005E.coli Wild-type
SA006214041113_EcoliCells_WT_R2_0060E.coli Wild-type
SA006215041113_EcoliCells_WT_Pool_MSMS_0064E.coli Wild-type
SA006216041113_EcoliCells_WT_R3_0044E.coli Wild-type
SA006217041113_EcoliCells_WT_R4_0034E.coli Wild-type
SA006218041113_EcoliCells_WT_R6_0023E.coli Wild-type
SA006219041113_EcoliCells_WT_R5_0037E.coli Wild-type
SA006206041113_EcoliCells_Yjef_R4_0038E.coli Δyjef Knock-out
SA006207041113_EcoliCells_Yjef_R5_0042E.coli Δyjef Knock-out
SA006208041113_EcoliCells_Yjef_R6_0025E.coli Δyjef Knock-out
SA006209041113_EcoliCells_Yjef_R2_0059E.coli Δyjef Knock-out
SA006210041113_EcoliCells_Yjef_Pool_MSMS_0066E.coli Δyjef Knock-out
SA006211041113_EcoliCells_Yjef_R3_0011E.coli Δyjef Knock-out
SA006212041113_EcoliCells_Yjef_R1_0049E.coli Δyjef Knock-out
SA006220041213_SentericaCells_RidAKO_R6_0055S.enterica RidA Knock-out
SA006221041113_SentericaCells_RidAKO_Pool_MSMS_0070S.enterica RidA Knock-out
SA006222041213_SentericaCells_RidAKO_R3_0029S.enterica RidA Knock-out
SA006223041213_SentericaCells_RidAKO_R4_0057S.enterica RidA Knock-out
SA006224041213_SentericaCells_RidAKO_R5_0035S.enterica RidA Knock-out
SA006225041213_SentericaCells_RidAKO_R2_0047S.enterica RidA Knock-out
SA006226041213_SentericaCells_RidAKO_R1_0022S.enterica RidA Knock-out
SA006227041113_SentericaCells_WT_Pool_MSMS_0068S.enterica Wild-type
SA006228041213_SentericaCells_WT_R6_0050S.enterica Wild-type
SA006229041213_SentericaCells_WT_R2_0058S.enterica Wild-type
SA006230041213_SentericaCells_WT_R3_0043S.enterica Wild-type
SA006231041213_SentericaCells_WT_R4_0021S.enterica Wild-type
SA006232041213_SentericaCells_WT_R5_0019S.enterica Wild-type
SA006233041213_SentericaCells_WT_R1_0048S.enterica Wild-type
Showing results 1 to 28 of 28
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