Summary of Study ST000561

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000412. The data can be accessed directly via it's Project DOI: 10.21228/M8SS33 This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

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Study IDST000561
Study TitleExploring the link between genotype, phenotype and metabolome for tomato seed quality attributes
Study TypeTomato Seed Metabolites Profiling (dry seed and 6 hour imbibed seeds comparision)
Study SummaryIn this study the F8 population of 100 Recombinant Inbred Lines (RILs) obtained from a cross between Solanum lycopersicum X Solanum pimpinellifolium were intelligently allocated to two sub-populations optimized for the distribution of parental alleles using the R-procedure DesignGG (Li et al., 2009; Joosen et al., 2013); hence 50 RIL lines were used for dry seeds and 50 lines for 6h imbibed seeds
Institute
Wageningen University & Research
DepartmentPlant Physiology
LaboratoryWageningen Seed Lab, Lab
Last NameLigterink
First NameWilco
AddressDroevendaalsesteeg 1, NL-6708 PB Wageningen, The Netherlands
Emailwilco.ligterink@wur.nl
Phone31 317 48 28 09
Submit Date2017-02-07
Num Groups1
Total Subjects100
PublicationsMetabolomic analysis of tomato seed germination, Metabolomics DOI: 10.1007/s11306-017-1284-x
Analysis Type DetailGC-MS
Release Date2017-10-25
Release Version1
Wilco Ligterink Wilco Ligterink
https://dx.doi.org/10.21228/M8SS33
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

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Factors:

Subject type: Plant; Subject species: Solanum lycopersicum (Factor headings shown in green)

mb_sample_id local_sample_id Treatment
SA0289272396hImbibedSeeds
SA0289282416hImbibedSeeds
SA0289292366hImbibedSeeds
SA0289302356hImbibedSeeds
SA0289312336hImbibedSeeds
SA0289322426hImbibedSeeds
SA0289332446hImbibedSeeds
SA0289342556hImbibedSeeds
SA0289352546hImbibedSeeds
SA0289362506hImbibedSeeds
SA0289372476hImbibedSeeds
SA0289382326hImbibedSeeds
SA0289392316hImbibedSeeds
SA0289402156hImbibedSeeds
SA0289412146hImbibedSeeds
SA0289422136hImbibedSeeds
SA0289432116hImbibedSeeds
SA0289442216hImbibedSeeds
SA0289452236hImbibedSeeds
SA0289462296hImbibedSeeds
SA0289472286hImbibedSeeds
SA0289482256hImbibedSeeds
SA0289492246hImbibedSeeds
SA0289502566hImbibedSeeds
SA0289512646hImbibedSeeds
SA0289522926hImbibedSeeds
SA0289532936hImbibedSeeds
SA0289542916hImbibedSeeds
SA0289552906hImbibedSeeds
SA0289562886hImbibedSeeds
SA0289572946hImbibedSeeds
SA0289582976hImbibedSeeds
SA0289593076hImbibedSeeds
SA0289603056hImbibedSeeds
SA0289613036hImbibedSeeds
SA0289623016hImbibedSeeds
SA0289632866hImbibedSeeds
SA0289642856hImbibedSeeds
SA0289652716hImbibedSeeds
SA0289662706hImbibedSeeds
SA0289672686hImbibedSeeds
SA0289682096hImbibedSeeds
SA0289692726hImbibedSeeds
SA0289702786hImbibedSeeds
SA0289712846hImbibedSeeds
SA0289722836hImbibedSeeds
SA0289732826hImbibedSeeds
SA0289742816hImbibedSeeds
SA0289752636hImbibedSeeds
SA0289762066hImbibedSeeds
SA028977243DrySeeds
SA028978245DrySeeds
SA028979240DrySeeds
SA028980238DrySeeds
SA028981237DrySeeds
SA028982246DrySeeds
SA028983248DrySeeds
SA028984257DrySeeds
SA028985253DrySeeds
SA028986252DrySeeds
SA028987249DrySeeds
SA028988234DrySeeds
SA028989230DrySeeds
SA028990212DrySeeds
SA028991216DrySeeds
SA028992210DrySeeds
SA028993208DrySeeds
SA028994207DrySeeds
SA028995217DrySeeds
SA028996218DrySeeds
SA028997227DrySeeds
SA028998226DrySeeds
SA028999222DrySeeds
SA029000219DrySeeds
SA029001258DrySeeds
SA029002259DrySeeds
SA029003289DrySeeds
SA029004295DrySeeds
SA029005287DrySeeds
SA029006280DrySeeds
SA029007279DrySeeds
SA029008298DrySeeds
SA029009299DrySeeds
SA029010306DrySeeds
SA029011304DrySeeds
SA029012302DrySeeds
SA029013300DrySeeds
SA029014277DrySeeds
SA029015276DrySeeds
SA029016265DrySeeds
SA029017262DrySeeds
SA029018261DrySeeds
SA029019260DrySeeds
SA029020266DrySeeds
SA029021267DrySeeds
SA029022275DrySeeds
SA029023274DrySeeds
SA029024273DrySeeds
SA029025269DrySeeds
SA029026205DrySeeds
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