Summary of Study ST000711
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000508. The data can be accessed directly via it's Project DOI: 10.21228/M80M4M This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST000711 |
| Study Title | Microbial ecology of nontuberculous mycobacteria (NTM) in cystic fibrosis (CF) sputum |
| Study Type | MS analysis |
| Study Summary | These are sputum samples collected from 8 individuals with cystic fibrosis during the course of routine clinical care. They were initially stored at 4C for up to 24 hours then stored at -80C. No processing has been done to the sputum prior to freezing. For each individual there are sputum samples collected both before and after the individual had his or her first positive sputum culture for nontuberculous mycobacteria (NTM). The individuals experienced different clinical courses after their infection. |
| Institute | University of Michigan |
| Department | Biomedical Research Core Facilities |
| Laboratory | Metabolomics core |
| Last Name | Kachman |
| First Name | Maureen |
| Address | 6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714 |
| mkachman@med.umich.edu | |
| Phone | (734) 232-8175 |
| Submit Date | 2017-06-19 |
| Num Groups | 2 |
| Total Subjects | 8 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | d |
| Analysis Type Detail | LC-MS |
| Release Date | 2017-12-06 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Human; Subject species: Homo sapiens (Factor headings shown in green)
| mb_sample_id | local_sample_id | M. abscessus | NTM pulmonary disease | pre-infection sample |
|---|---|---|---|---|
| SA040056 | S00022364 | no | no | no |
| SA040057 | S00022366 | no | no | no |
| SA040058 | S00022363 | no | no | yes |
| SA040059 | S00022365 | no | no | yes |
| SA040060 | S00022356 | no | yes | no |
| SA040061 | S00022368 | no | yes | no |
| SA040062 | S00022353 | no | yes | no |
| SA040063 | S00022357 | no | yes | no |
| SA040064 | S00022348 | no | yes | no |
| SA040065 | S00022350 | no | yes | no |
| SA040066 | S00022354 | no | yes | yes |
| SA040067 | S00022351 | no | yes | yes |
| SA040068 | S00022367 | no | yes | yes |
| SA040069 | S00022347 | no | yes | yes |
| SA040070 | S00022355 | no | yes | yes |
| SA040071 | S00022352 | no | yes | yes |
| SA040072 | S00022345 | no | yes | yes |
| SA040073 | S00022346 | no | yes | yes |
| SA040074 | S00022349 | no | yes | yes |
| SA040075 | S00022361 | yes | yes | no |
| SA040076 | S00022362 | yes | yes | no |
| SA040077 | S00022358 | yes | yes | yes |
| SA040078 | S00022360 | yes | yes | yes |
| SA040079 | S00022359 | yes | yes | yes |
| Showing results 1 to 24 of 24 |
