Summary of study ST001381

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000945. The data can be accessed directly via it's Project DOI: 10.21228/M8J967 This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

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Study IDST001381
Study TitleLipid profile Dataset of optogenetics induced optic nerve regeneration
Study SummaryUsing the transgenic Chr2 mouse (Thy1-ChR2-EYFP) as a model of regeneration, we present the profile the lipid changes that occur after optic nerve crush, light stimulation and RGC growth. Thy1-ChR2-EYFP mice and controls (C57BL/6) were divided in four groups each, no crush and no stimulation, no crush and stimulation, crush and no stimulation, crush and stimulation.
Institute
University of Miami
Last NameBhattacharya
First NameSanjoy
Address1638 NW 10th Avenue, Room 706-A, Miami, FL 33136
Emailsbhattacharya@med.miami.edu
Phone305-482-4103
Submit Date2020-03-27
Raw Data AvailableYes
Raw Data File Type(s).raw
Analysis Type DetailLC-MS
Release Date2020-05-22
Release Version1
Sanjoy Bhattacharya Sanjoy Bhattacharya
https://dx.doi.org/10.21228/M8J967
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

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Factors:

Subject type: Mammal; Subject species: Mus musculus (Factor headings shown in green)

mb_sample_id local_sample_id Genotype Treatment
SA100908p_NR_PC_PS_OS_519_A003, p_NR_PC_PS_OS_519_A004, p_NR_PC_PS_OS_519_A005, p_NR_PC_PS_OS_519_A006"Crush, light stimulation -
SA100915PR_PC_PS_OS_581Thy1-ChR2-EYFP Crush, light stimulation
SA100916PR_PC_PS_OS_903Thy1-ChR2-EYFP Crush, light stimulation
SA100917PR_PC_PS_OS_905Thy1-ChR2-EYFP Crush, light stimulation
SA100918PR_PC_PS_OS_889Thy1-ChR2-EYFP Crush, light stimulation
SA100919PR_PC_PS_OS_777Thy1-ChR2-EYFP Crush, light stimulation
SA100920PR_PC_PS_OS_901Thy1-ChR2-EYFP Crush, light stimulation
SA100909PR_PC_NS_OS_796Thy1-ChR2-EYFP Crush, No light stimulation
SA100910PR_PC_NS_OS_791Thy1-ChR2-EYFP Crush, No light stimulation
SA100911PR_PC_NS_OS_744Thy1-ChR2-EYFP Crush, No light stimulation
SA100912PR_PC_NS_OS_607Thy1-ChR2-EYFP Crush, No light stimulation
SA100913PR_PC_NS_OS_608Thy1-ChR2-EYFP Crush, No light stimulation
SA100914PR_PC_NS_OS_806Thy1-ChR2-EYFP Crush, No light stimulation
SA100921PR_NC_PS_OD_901Thy1-ChR2-EYFP No Crush, light stimulation
SA100922PR_NC_PS_OD_889Thy1-ChR2-EYFP No Crush, light stimulation
SA100923PR_NC_PS_OD_905Thy1-ChR2-EYFP No Crush, light stimulation
SA100924PR_NC_PS_OD_581Thy1-ChR2-EYFP No Crush, light stimulation
SA100925PR_NC_PS_OD_613Thy1-ChR2-EYFP No Crush, light stimulation
SA100926PR_NC_PS_OD_777Thy1-ChR2-EYFP No Crush, light stimulation
SA100927PR_NC_NS_OD_607Thy1-ChR2-EYFP No Crush, No light stimulation
SA100928PR_NC_NS_OD_608Thy1-ChR2-EYFP No Crush, No light stimulation
SA100929PR_NC_NS_OD_796Thy1-ChR2-EYFP No Crush, No light stimulation
SA100930PR_NC_NS_OD_793Thy1-ChR2-EYFP No Crush, No light stimulation
SA100931PR_NC_NS_OD_791Thy1-ChR2-EYFP No Crush, No light stimulation
SA100932PR_NC_NS_OD_744Thy1-ChR2-EYFP No Crush, No light stimulation
SA100907NR_PC_PS_OS_519- -
SA100939NR_PC_PS_OS_616Wild-type Crush, light stimulation
SA100940NR_PC_PS_OS_518Wild-type Crush, light stimulation
SA100941NR_PC_PS_OS_549Wild-type Crush, light stimulation
SA100942NR_PC_PS_OS_539Wild-type Crush, light stimulation
SA100943NR_PC_PS_OS_579Wild-type Crush, light stimulation
SA100933NR_PC_NS_OS_766Wild-type Crush, No light stimulation
SA100934NR_PC_NS_OS_540Wild-type Crush, No light stimulation
SA100935NR_PC_NS_OS_601Wild-type Crush, No light stimulation
SA100936NR_PC_NS_OS_603Wild-type Crush, No light stimulation
SA100937NR_PC_NS_OS_604Wild-type Crush, No light stimulation
SA100938NR_PC_NS_OS_782Wild-type Crush, No light stimulation
SA100944NR_NC_PS_OD_519Wild-type No Crush, light stimulation
SA100945NR_NC_PS_OD_518Wild-type No Crush, light stimulation
SA100946NR_NC_PS_OD_549Wild-type No Crush, light stimulation
SA100947NR_NC_PS_OD_552Wild-type No Crush, light stimulation
SA100948NR_NC_PS_OD_579Wild-type No Crush, light stimulation
SA100949NR_NC_PS_OD_616Wild-type No Crush, light stimulation
SA100950NR_NC_NS_OD_603Wild-type No Crush, No light stimulation
SA100951NR_NC_NS_OD_602Wild-type No Crush, No light stimulation
SA100952NR_NC_NS_OD_614Wild-type No Crush, No light stimulation
SA100953NR_NC_NS_OD_766Wild-type No Crush, No light stimulation
SA100954NR_NC_NS_OD_540Wild-type No Crush, No light stimulation
SA100955NR_NC_NS_OD_742Wild-type No Crush, No light stimulation
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