Summary of Study ST001514
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001021. The data can be accessed directly via it's Project DOI: 10.21228/M8QM5H This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
Study ID | ST001514 |
Study Title | Community metabolomes reflect taxon-specific fingerprints of phytoplankton in the ocean |
Study Type | Metabolomic survey of 21 phytoplankton species |
Study Summary | Phytoplankton transform inorganic carbon into thousands of biomolecules, including polar metabolites that represent an important pool of labile fixed carbon, nitrogen, and sulfur. Metabolite production is not identical among phytoplankton, and the flux of these molecules through the microbial loop depends on compound-specific bioavailability to a wider microbial community. Yet relatively little is known about the diversity or concentration of polar metabolites within marine plankton. Here we evaluate 313 metabolites in 21 phytoplankton species and in natural marine particles across environmental gradients to show that bulk community metabolomes reflect the phytoplankton community on a chemical level. |
Institute | University of Washington |
Department | Oceanography |
Laboratory | Ingalls Lab |
Last Name | Heal |
First Name | Katherine |
Address | 1501 NE Boat Street, Marine Science Building, Room G, Seattle, WA, 98195, USA |
kheal@uw.edu | |
Phone | 612-616-4840 |
Submit Date | 2020-10-22 |
Raw Data Available | Yes |
Raw Data File Type(s) | mzXML |
Analysis Type Detail | LC-MS |
Release Date | 2021-01-25 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Other; Subject species: Marine Plankton (Factor headings shown in green)
mb_sample_id | local_sample_id | Species | Strain | Broad taxon |
---|---|---|---|---|
SA127134 | 1771_A | Alexandrium tamarense | 1771 | Dinoflagellate |
SA127135 | 1771_B | Alexandrium tamarense | 1771 | Dinoflagellate |
SA127136 | 1771_C | Alexandrium tamarense | 1771 | Dinoflagellate |
SA127137 | 1314_B | Amphidinium carterae | 1314 | Dinoflagellate |
SA127138 | 1314_C | Amphidinium carterae | 1314 | Dinoflagellate |
SA127139 | 1314_A | Amphidinium carterae | 1314 | Dinoflagellate |
SA127140 | 8501_C | Crocosphaera watsonii | 8501 | Cyanobacteria |
SA127141 | 8501_D | Crocosphaera watsonii | 8501 | Cyanobacteria |
SA127142 | 8501_B | Crocosphaera watsonii | 8501 | Cyanobacteria |
SA127143 | Cy_C | Cyclotella meneghiniana | 338 | Diatom |
SA127144 | Cy_A | Cyclotella meneghiniana | 338 | Diatom |
SA127145 | Cy_B | Cyclotella meneghiniana | 338 | Diatom |
SA127146 | 2090_A | Emiliania huxleyi | 2090 | Haptophyte |
SA127147 | 2090_C | Emiliania huxleyi | 2090 | Haptophyte |
SA127148 | 2090_B | Emiliania huxleyi | 2090 | Haptophyte |
SA127149 | 371_B | Emiliania huxleyi | 371 | Haptophyte |
SA127150 | 371_C | Emiliania huxleyi | 371 | Haptophyte |
SA127151 | 371_A | Emiliania huxleyi | 371 | Haptophyte |
SA127152 | 449_B | Heterocapsa triquetra | 449 | Dinoflagellate |
SA127153 | 449_A | Heterocapsa triquetra | 449 | Dinoflagellate |
SA127154 | 449_C | Heterocapsa triquetra | 449 | Dinoflagellate |
SA127155 | 2021_B | Lingulodinium polyedra | 2021 | Dinoflagellate |
SA127156 | 2021_C | Lingulodinium polyedra | 2021 | Dinoflagellate |
SA127157 | 2021_A | Lingulodinium polyedra | 2021 | Dinoflagellate |
SA127158 | 1545_B | Micromonas pusilla | 1545 | Prasinophyte |
SA127159 | 1545_A | Micromonas pusilla | 1545 | Prasinophyte |
SA127160 | 1545_C | Micromonas pusilla | 1545 | Prasinophyte |
SA127161 | Np_A | Navicula pelliculosa | 543 | Diatom |
SA127162 | Np_F | Navicula pelliculosa | 543 | Diatom |
SA127163 | Np_C | Navicula pelliculosa | 543 | Diatom |
SA127164 | Nmar_2 | Nitrosopumilus maritimus | SCM1 | Archaea |
SA127165 | Nmar_3 | Nitrosopumilus maritimus | SCM1 | Archaea |
SA127166 | Nmar_1 | Nitrosopumilus maritimus | SCM1 | Archaea |
SA127167 | 3430_B | Ostreococcus lucimarinus | 3430 | Prasinophyte |
SA127168 | 3430_C | Ostreococcus lucimarinus | 3430 | Prasinophyte |
SA127169 | 3430_A | Ostreococcus lucimarinus | 3430 | Prasinophyte |
SA127170 | Pt_C | Phaeodactylum tricornutum | 2561 | Diatom |
SA127171 | Pt_F | Phaeodactylum tricornutum | 2561 | Diatom |
SA127172 | 1314P_C | Prochlorococcus marinus | 1314 | Cyanobacteria |
SA127173 | 1314P_B | Prochlorococcus marinus | 1314 | Cyanobacteria |
SA127174 | 1314P_A | Prochlorococcus marinus | 1314 | Cyanobacteria |
SA127175 | As9601_B | Prochlorococcus marinus | AS9601 | Cyanobacteria |
SA127176 | As9601_C | Prochlorococcus marinus | AS9601 | Cyanobacteria |
SA127177 | As9601_A | Prochlorococcus marinus | AS9601 | Cyanobacteria |
SA127178 | MED4_F | Prochlorococcus marinus | MED4 | Cyanobacteria |
SA127179 | MED4_E | Prochlorococcus marinus | MED4 | Cyanobacteria |
SA127180 | MED4_D | Prochlorococcus marinus | MED4 | Cyanobacteria |
SA127181 | Nat_A | Prochlorococcus marinus | NATL2A | Cyanobacteria |
SA127182 | Nat_C | Prochlorococcus marinus | NATL2A | Cyanobacteria |
SA127183 | Nat_B | Prochlorococcus marinus | NATL2A | Cyanobacteria |
SA127184 | Pc55x_B | Pseudo-nitzschia pungens | Pc55x | Diatom |
SA127185 | Pc55x_A | Pseudo-nitzschia pungens | Pc55x | Diatom |
SA127186 | Pc55x_C | Pseudo-nitzschia pungens | Pc55x | Diatom |
SA127187 | 7803_F | Synechococcus sp. | 7803 | Cyanobacteria |
SA127188 | 7803_B | Synechococcus sp. | 7803 | Cyanobacteria |
SA127189 | 8102_F | Synechococcus sp. | 8102 | Cyanobacteria |
SA127190 | 8102_A | Synechococcus sp. | 8102 | Cyanobacteria |
SA127191 | To_A | Thalassiosira oceanica | 1005 | Diatom |
SA127192 | To_B | Thalassiosira oceanica | 1005 | Diatom |
SA127193 | To_C | Thalassiosira oceanica | 1005 | Diatom |
SA127194 | Tp_E | Thalassiosira pseudonana | 1335 | Diatom |
SA127195 | Tp_A | Thalassiosira pseudonana | 1335 | Diatom |
SA127196 | Tp_F | Thalassiosira pseudonana | 1335 | Diatom |
Showing results 1 to 63 of 63 |