Summary of Study ST001514

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001021. The data can be accessed directly via it's Project DOI: 10.21228/M8QM5H This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

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Study IDST001514
Study TitleCommunity metabolomes reflect taxon-specific fingerprints of phytoplankton in the ocean
Study TypeMetabolomic survey of 21 phytoplankton species
Study SummaryPhytoplankton transform inorganic carbon into thousands of biomolecules, including polar metabolites that represent an important pool of labile fixed carbon, nitrogen, and sulfur. Metabolite production is not identical among phytoplankton, and the flux of these molecules through the microbial loop depends on compound-specific bioavailability to a wider microbial community. Yet relatively little is known about the diversity or concentration of polar metabolites within marine plankton. Here we evaluate 313 metabolites in 21 phytoplankton species and in natural marine particles across environmental gradients to show that bulk community metabolomes reflect the phytoplankton community on a chemical level.
Institute
University of Washington
DepartmentOceanography
LaboratoryIngalls Lab
Last NameHeal
First NameKatherine
Address1501 NE Boat Street, Marine Science Building, Room G, Seattle, WA, 98195, USA
Emailkheal@uw.edu
Phone612-616-4840
Submit Date2020-10-22
Raw Data AvailableYes
Raw Data File Type(s)mzXML
Analysis Type DetailLC-MS
Release Date2021-01-25
Release Version1
Katherine Heal Katherine Heal
https://dx.doi.org/10.21228/M8QM5H
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

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Factors:

Subject type: Other; Subject species: Marine Plankton (Factor headings shown in green)

mb_sample_id local_sample_id Species Strain Broad taxon
SA1271341771_AAlexandrium tamarense 1771 Dinoflagellate
SA1271351771_BAlexandrium tamarense 1771 Dinoflagellate
SA1271361771_CAlexandrium tamarense 1771 Dinoflagellate
SA1271371314_BAmphidinium carterae 1314 Dinoflagellate
SA1271381314_CAmphidinium carterae 1314 Dinoflagellate
SA1271391314_AAmphidinium carterae 1314 Dinoflagellate
SA1271408501_CCrocosphaera watsonii 8501 Cyanobacteria
SA1271418501_DCrocosphaera watsonii 8501 Cyanobacteria
SA1271428501_BCrocosphaera watsonii 8501 Cyanobacteria
SA127143Cy_CCyclotella meneghiniana 338 Diatom
SA127144Cy_ACyclotella meneghiniana 338 Diatom
SA127145Cy_BCyclotella meneghiniana 338 Diatom
SA1271462090_AEmiliania huxleyi 2090 Haptophyte
SA1271472090_CEmiliania huxleyi 2090 Haptophyte
SA1271482090_BEmiliania huxleyi 2090 Haptophyte
SA127149371_BEmiliania huxleyi 371 Haptophyte
SA127150371_CEmiliania huxleyi 371 Haptophyte
SA127151371_AEmiliania huxleyi 371 Haptophyte
SA127152449_BHeterocapsa triquetra 449 Dinoflagellate
SA127153449_AHeterocapsa triquetra 449 Dinoflagellate
SA127154449_CHeterocapsa triquetra 449 Dinoflagellate
SA1271552021_BLingulodinium polyedra 2021 Dinoflagellate
SA1271562021_CLingulodinium polyedra 2021 Dinoflagellate
SA1271572021_ALingulodinium polyedra 2021 Dinoflagellate
SA1271581545_BMicromonas pusilla 1545 Prasinophyte
SA1271591545_AMicromonas pusilla 1545 Prasinophyte
SA1271601545_CMicromonas pusilla 1545 Prasinophyte
SA127161Np_ANavicula pelliculosa 543 Diatom
SA127162Np_FNavicula pelliculosa 543 Diatom
SA127163Np_CNavicula pelliculosa 543 Diatom
SA127164Nmar_2Nitrosopumilus maritimus SCM1 Archaea
SA127165Nmar_3Nitrosopumilus maritimus SCM1 Archaea
SA127166Nmar_1Nitrosopumilus maritimus SCM1 Archaea
SA1271673430_BOstreococcus lucimarinus 3430 Prasinophyte
SA1271683430_COstreococcus lucimarinus 3430 Prasinophyte
SA1271693430_AOstreococcus lucimarinus 3430 Prasinophyte
SA127170Pt_CPhaeodactylum tricornutum 2561 Diatom
SA127171Pt_FPhaeodactylum tricornutum 2561 Diatom
SA1271721314P_CProchlorococcus marinus 1314 Cyanobacteria
SA1271731314P_BProchlorococcus marinus 1314 Cyanobacteria
SA1271741314P_AProchlorococcus marinus 1314 Cyanobacteria
SA127175As9601_BProchlorococcus marinus AS9601 Cyanobacteria
SA127176As9601_CProchlorococcus marinus AS9601 Cyanobacteria
SA127177As9601_AProchlorococcus marinus AS9601 Cyanobacteria
SA127178MED4_FProchlorococcus marinus MED4 Cyanobacteria
SA127179MED4_EProchlorococcus marinus MED4 Cyanobacteria
SA127180MED4_DProchlorococcus marinus MED4 Cyanobacteria
SA127181Nat_AProchlorococcus marinus NATL2A Cyanobacteria
SA127182Nat_CProchlorococcus marinus NATL2A Cyanobacteria
SA127183Nat_BProchlorococcus marinus NATL2A Cyanobacteria
SA127184Pc55x_BPseudo-nitzschia pungens Pc55x Diatom
SA127185Pc55x_APseudo-nitzschia pungens Pc55x Diatom
SA127186Pc55x_CPseudo-nitzschia pungens Pc55x Diatom
SA1271877803_FSynechococcus sp. 7803 Cyanobacteria
SA1271887803_BSynechococcus sp. 7803 Cyanobacteria
SA1271898102_FSynechococcus sp. 8102 Cyanobacteria
SA1271908102_ASynechococcus sp. 8102 Cyanobacteria
SA127191To_AThalassiosira oceanica 1005 Diatom
SA127192To_BThalassiosira oceanica 1005 Diatom
SA127193To_CThalassiosira oceanica 1005 Diatom
SA127194Tp_EThalassiosira pseudonana 1335 Diatom
SA127195Tp_AThalassiosira pseudonana 1335 Diatom
SA127196Tp_FThalassiosira pseudonana 1335 Diatom
Showing results 1 to 63 of 63
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