Summary of Study ST001606
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001031. The data can be accessed directly via it's Project DOI: 10.21228/M8F39C This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST001606 |
| Study Title | Aromatic amino acid metabolism by the anaerobic gut bacterium Clostridium sporogenes |
| Study Summary | Germ-free mice were mono-colonized with wild-type Clostridium sporogenes or its isogenic phenyllactate dehydratase (fldC) mutant. Feces, cecal contents, serum, and urine were collected for untargeted GC-TOF analysis. |
| Institute | Stanford University |
| Laboratory | Dodd |
| Last Name | Pruss |
| First Name | Kali |
| Address | 300 Pasteur Drive, Lane 235 |
| kmpruss@stanford.edu | |
| Phone | 6507212961 |
| Submit Date | 2020-11-20 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | cdf |
| Analysis Type Detail | GC-MS |
| Release Date | 2020-12-01 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Mammal; Subject species: Mus musculus (Factor headings shown in green)
| mb_sample_id | local_sample_id | host_compartment | bacterial_genotype |
|---|---|---|---|
| SA136014 | 1 - Cecal Contents_fldC-5_038 | Cecal Contents | fldC |
| SA136015 | 1 - Cecal Contents_fldC-4_037 | Cecal Contents | fldC |
| SA136016 | 1 - Cecal Contents_fldC-2_035 | Cecal Contents | fldC |
| SA136017 | 1 - Cecal Contents_fldC-1_034 | Cecal Contents | fldC |
| SA136018 | 1 - Cecal Contents_fldC-3_036 | Cecal Contents | fldC |
| SA136009 | 1 - Cecal Contents_WT-1_014 | Cecal Contents | WT |
| SA136010 | 1 - Cecal Contents_WT-5_018 | Cecal Contents | WT |
| SA136011 | 1 - Cecal Contents_WT-4_017 | Cecal Contents | WT |
| SA136012 | 1 - Cecal Contents_WT-2_015 | Cecal Contents | WT |
| SA136013 | 1 - Cecal Contents_WT-3_016 | Cecal Contents | WT |
| SA136024 | 2 - Feces_fldC-4_032 | Feces | fldC |
| SA136025 | 2 - Feces_fldC-5_033 | Feces | fldC |
| SA136026 | 2 - Feces_fldC-3_031 | Feces | fldC |
| SA136027 | 2 - Feces_fldC-1_029 | Feces | fldC |
| SA136028 | 2 - Feces_fldC-2_030 | Feces | fldC |
| SA136019 | 2 - Feces_WT-5_013 | Feces | WT |
| SA136020 | 2 - Feces_WT-4_012 | Feces | WT |
| SA136021 | 2 - Feces_WT-3_011 | Feces | WT |
| SA136022 | 2 - Feces_WT-1_009 | Feces | WT |
| SA136023 | 2 - Feces_WT-2_010 | Feces | WT |
| SA136034 | 3 - Serum_fldC-5_023 | Serum | fldC |
| SA136035 | 3 - Serum_fldC-4_022 | Serum | fldC |
| SA136036 | 3 - Serum_fldC-3_021 | Serum | fldC |
| SA136037 | 3 - Serum_fldC-1_019 | Serum | fldC |
| SA136038 | 3 - Serum_fldC-2_020 | Serum | fldC |
| SA136029 | 3 - Serum_WT-5_005 | Serum | WT |
| SA136030 | 3 - Serum_WT-4_004 | Serum | WT |
| SA136031 | 3 - Serum_WT-3_003 | Serum | WT |
| SA136032 | 3 - Serum_WT-2_002 | Serum | WT |
| SA136033 | 3 - Serum_WT-1_001 | Serum | WT |
| SA136042 | 4 - Urine_fldC-5_028 | Urine | fldC |
| SA136043 | 4 - Urine_fldC-4_027 | Urine | fldC |
| SA136044 | 4 - Urine_fldC-1_024 | Urine | fldC |
| SA136045 | 4 - Urine_fldC-2_025 | Urine | fldC |
| SA136046 | 4 - Urine_fldC-3_026 | Urine | fldC |
| SA136039 | 4 - Urine_WT-5_008 | Urine | WT |
| SA136040 | 4 - Urine_WT-4_007 | Urine | WT |
| SA136041 | 4 - Urine_WT-1_006 | Urine | WT |
| Showing results 1 to 38 of 38 |
