Summary of Study ST001996
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001268. The data can be accessed directly via it's Project DOI: 10.21228/M8T39S This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST001996 |
| Study Title | Polyamine import and accumulation causes immunomodulation in macrophages engulfing apoptotic cells (Part 1) |
| Study Summary | Phagocytosis of apoptotic cells, termed efferocytosis, is critical for tissue homeostasis and drives anti-inflammatory programming in engulfing macrophages. Here, we assess metabolites in naïve and inflammatory macrophages following engulfment of multiple cellular and non-cellular targets. Efferocytosis leads to unique increases in the arginine-derived polyamines, spermidine and spermine, in vitro and in vivo. Surprisingly, polyamine accumulation after efferocytosis does not arise from retention of apoptotic cell metabolites or de novo synthesis, but from enhanced polyamine import that is dependent on Rac1, actin, and PI3 kinase. Blocking polyamine import prevents efferocytosis from suppressing macrophage IL-1or IL-6. This identifies efferocytosis as a trigger for polyamine import and accumulation, and imported polyamines as mediators of efferocytosis-induced immune reprogramming. |
| Institute | University of Colorado Denver |
| Last Name | Haines |
| First Name | Julie |
| Address | 12801 E 17th Ave, Room 1303, Aurora, Colorado, 80045, USA |
| julie.haines@cuanschutz.edu | |
| Phone | 3037243339 |
| Submit Date | 2021-11-22 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | raw(Thermo) |
| Analysis Type Detail | LC-MS |
| Release Date | 2021-12-08 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Cultured cells; Subject species: Mus musculus (Factor headings shown in green)
| mb_sample_id | local_sample_id | category |
|---|---|---|
| SA186774 | NecJ 4h 3+ | 4h engulfing |
| SA186775 | NecJ 4h 1+ | 4h engulfing |
| SA186776 | NecJ 4h 2+ | 4h engulfing |
| SA186777 | NecJ 4h 1- | 4h non-engulfing |
| SA186778 | NecJ 4h 3- | 4h non-engulfing |
| SA186779 | NecJ 4h 2- | 4h non-engulfing |
| SA186780 | NecJ 4h 2 | 4h unexposed |
| SA186781 | NecJ 4h 1 | 4h unexposed |
| SA186782 | NecJ 4h 3 | 4h unexposed |
| SA186783 | NecJ 8h 1+ | 8h engulfing |
| SA186784 | NecJ 8h 3+ | 8h engulfing |
| SA186785 | NecJ 8h 2+ | 8h engulfing |
| SA186786 | NecJ 8h 3- | 8h non-engulfing |
| SA186787 | NecJ 8h 1- | 8h non-engulfing |
| SA186788 | NecJ 8h 2- | 8h non-engulfing |
| SA186789 | NecJ 8h 1 | 8h unexposed |
| SA186790 | NecJ 8h 2 | 8h unexposed |
| SA186791 | NecJ 8h 3 | 8h unexposed |
| Showing results 1 to 18 of 18 |
