Summary of Study ST002051
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001297. The data can be accessed directly via it's Project DOI: 10.21228/M82H7B This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
Study ID | ST002051 |
Study Title | The apicomplexan parasite Toxoplasma gondii forms bradyzoite-containing tissue cysts that cause chronic and drug-tolerant infections. |
Study Summary | The apicomplexan parasite Toxoplasma gondii forms bradyzoite-containing tissue cysts that cause chronic and drug-tolerant infections. Here, we developed a human myotube-based in vitro culture model of functionally mature tissue cysts. Metabolomic characterization of purified cysts reveals global changes that comprise increased levels of amino acids and decreased abundance of nucleobase- and tricarboxylic acid cycle-associated metabolites. In contrast to fast replicating tachyzoite forms of T. gondii these tissue cysts tolerate exposure to the aconitase inhibitor sodium fluoroacetate. |
Institute | Robert Koch-Institute |
Department | NG2 |
Laboratory | NG2 |
Last Name | Blume |
First Name | Martin |
Address | Seestraße 10 |
blumem@rki.de | |
Phone | +49 30 18754 2572 |
Submit Date | 2022-01-04 |
Raw Data Available | Yes |
Raw Data File Type(s) | mzML |
Analysis Type Detail | LC-MS |
Release Date | 2022-02-28 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Other organism; Subject species: Toxoplasma gondii (Factor headings shown in green)
mb_sample_id | local_sample_id | Factor |
---|---|---|
SA193510 | 0424_Blank_4 | Blank |
SA193511 | 0424_Blank_1 | Blank |
SA193512 | 0424_Blank_2 | Blank |
SA193513 | 0427_Blank_1 | Blank |
SA193514 | 0427_Blank_2 | Blank |
SA193515 | 0427_Blank_4 | Blank |
SA193516 | 0427_Blank_3 | Blank |
SA193517 | 0424_Blank_3 | Blank |
SA193558 | 0424_NP_T1 | NP_bead |
SA193559 | 0427_NP_T1 | NP_bead |
SA193518 | 0427_NP_Cysten_T1_2 | NP_Cysten_bead |
SA193519 | 0427_NP_Cysten_T1_4 | NP_Cysten_bead |
SA193520 | 0424_NP_Cysten_T1_1 | NP_Cysten_bead |
SA193521 | 0427_NP_Cysten_T1_3 | NP_Cysten_bead |
SA193522 | 0427_NP_Cysten_T1_1 | NP_Cysten_bead |
SA193523 | 0424_NP_Cysten_T1_4 | NP_Cysten_bead |
SA193524 | 0424_NP_Cysten_T1_3 | NP_Cysten_bead |
SA193525 | 0424_NP_Cysten_T1_2 | NP_Cysten_bead |
SA193526 | 0427_NP_Tachy_HFF_2 | NP_Tachy_HFF |
SA193527 | 0427_NP_Tachy_HFF_4 | NP_Tachy_HFF |
SA193528 | 0427_NP_Tachy_HFF_3 | NP_Tachy_HFF |
SA193529 | 0424_NP_Tachy_HFF_1 | NP_Tachy_HFF |
SA193530 | 0427_NP_Tachy_HFF_1 | NP_Tachy_HFF |
SA193531 | 0424_NP_Tachy_HFF_3 | NP_Tachy_HFF |
SA193532 | 0424_NP_Tachy_HFF_2 | NP_Tachy_HFF |
SA193533 | 0424_NP_Tachy_HFF_4 | NP_Tachy_HFF |
SA193534 | 0427_NP_Tachy_HFF_T1_2 | NP_Tachy_HFF_bead |
SA193535 | 0427_NP_Tachy_HFF_T1_4 | NP_Tachy_HFF_bead |
SA193536 | 0427_NP_Tachy_HFF_T1_3 | NP_Tachy_HFF_bead |
SA193537 | 0427_NP_Tachy_HFF_T1_1 | NP_Tachy_HFF_bead |
SA193538 | 0424_NP_Tachy_HFF_T1_3 | NP_Tachy_HFF_bead |
SA193539 | 0424_NP_Tachy_HFF_T1_1 | NP_Tachy_HFF_bead |
SA193540 | 0424_NP_Tachy_HFF_T1_4 | NP_Tachy_HFF_bead |
SA193541 | 0424_NP_Tachy_HFF_T1_2 | NP_Tachy_HFF_bead |
SA193542 | 0427_NP_Tachy_Tubes_3 | NP_Tachy_Tubes |
SA193543 | 0427_NP_Tachy_Tubes_1 | NP_Tachy_Tubes |
SA193544 | 0427_NP_Tachy_Tubes_2 | NP_Tachy_Tubes |
SA193545 | 0424_NP_Tachy_Tubes_3 | NP_Tachy_Tubes |
SA193546 | 0424_NP_Tachy_Tubes_1 | NP_Tachy_Tubes |
SA193547 | 0427_NP_Tachy_Tubes_4 | NP_Tachy_Tubes |
SA193548 | 0424_NP_Tachy_Tubes_4 | NP_Tachy_Tubes |
SA193549 | 0424_NP_Tachy_Tubes_2 | NP_Tachy_Tubes |
SA193550 | 0424_NP_Tachy_Tubes_T1_4 | NP_Tachy_Tubes_bead |
SA193551 | 0427_NP_Tachy_Tubes_T1_1 | NP_Tachy_Tubes_bead |
SA193552 | 0427_NP_Tachy_Tubes_T1_2 | NP_Tachy_Tubes_bead |
SA193553 | 0427_NP_Tachy_Tubes_T1_4 | NP_Tachy_Tubes_bead |
SA193554 | 0424_NP_Tachy_Tubes_T1_1 | NP_Tachy_Tubes_bead |
SA193555 | 0424_NP_Tachy_Tubes_T1_3 | NP_Tachy_Tubes_bead |
SA193556 | 0427_NP_Tachy_Tubes_T1_3 | NP_Tachy_Tubes_bead |
SA193557 | 0424_NP_Tachy_Tubes_T1_2 | NP_Tachy_Tubes_bead |
SA193560 | 0427_NP_uninf_T1_3 | NP_uninf_bead |
SA193561 | 0427_NP_uninf_T1_2 | NP_uninf_bead |
SA193562 | 0427_NP_uninf_T1_4 | NP_uninf_bead |
SA193563 | 0424_NP_uninf_T1_3 | NP_uninf_bead |
SA193564 | 0424_NP_uninf_T1_1 | NP_uninf_bead |
SA193565 | 0427_NP_uninf_T1_1 | NP_uninf_bead |
SA193566 | 0424_NP_uninf_T1_2 | NP_uninf_bead |
SA193567 | 0424_NP_uninf_T1_4 | NP_uninf_bead |
SA193608 | 0424_PP_T1 | PP_bead |
SA193609 | 0427_PP_T1 | PP_bead |
SA193568 | 0424_PP_Cysten_T1_2 | PP_Cysten_bead |
SA193569 | 0424_PP_Cysten_T1_1 | PP_Cysten_bead |
SA193570 | 0427_PP_Cysten_T1_4 | PP_Cysten_bead |
SA193571 | 0427_PP_Cysten_T1_3 | PP_Cysten_bead |
SA193572 | 0424_PP_Cysten_T1_4 | PP_Cysten_bead |
SA193573 | 0424_PP_Cysten_T1_3 | PP_Cysten_bead |
SA193574 | 0427_PP_Cysten_T1_1 | PP_Cysten_bead |
SA193575 | 0427_PP_Cysten_T1_2 | PP_Cysten_bead |
SA193576 | 0427_PP_Tachy_HFF_2 | PP_Tachy_HFF |
SA193577 | 0427_PP_Tachy_HFF_4 | PP_Tachy_HFF |
SA193578 | 0427_PP_Tachy_HFF_1 | PP_Tachy_HFF |
SA193579 | 0427_PP_Tachy_HFF_3 | PP_Tachy_HFF |
SA193580 | 0424_PP_Tachy_HFF_2 | PP_Tachy_HFF |
SA193581 | 0424_PP_Tachy_HFF_1 | PP_Tachy_HFF |
SA193582 | 0424_PP_Tachy_HFF_3 | PP_Tachy_HFF |
SA193583 | 0424_PP_Tachy_HFF_4 | PP_Tachy_HFF |
SA193584 | 0427_PP_Tachy_HFF_T1_2 | PP_Tachy_HFF_bead |
SA193585 | 0427_PP_Tachy_HFF_T1_4 | PP_Tachy_HFF_bead |
SA193586 | 0427_PP_Tachy_HFF_T1_1 | PP_Tachy_HFF_bead |
SA193587 | 0427_PP_Tachy_HFF_T1_3 | PP_Tachy_HFF_bead |
SA193588 | 0424_PP_Tachy_HFF_T1_3 | PP_Tachy_HFF_bead |
SA193589 | 0424_PP_Tachy_HFF_T1_1 | PP_Tachy_HFF_bead |
SA193590 | 0424_PP_Tachy_HFF_T1_2 | PP_Tachy_HFF_bead |
SA193591 | 0424_PP_Tachy_HFF_T1_4 | PP_Tachy_HFF_bead |
SA193592 | 0427_PP_Tachy_Tubes_3 | PP_Tachy_Tubes |
SA193593 | 0427_PP_Tachy_Tubes_2 | PP_Tachy_Tubes |
SA193594 | 0424_PP_Tachy_Tubes_1 | PP_Tachy_Tubes |
SA193595 | 0427_PP_Tachy_Tubes_1 | PP_Tachy_Tubes |
SA193596 | 0427_PP_Tachy_Tubes_4 | PP_Tachy_Tubes |
SA193597 | 0424_PP_Tachy_Tubes_4 | PP_Tachy_Tubes |
SA193598 | 0424_PP_Tachy_Tubes_2 | PP_Tachy_Tubes |
SA193599 | 0424_PP_Tachy_Tubes_3 | PP_Tachy_Tubes |
SA193600 | 0427_PP_Tachy_Tubes_T1_2 | PP_Tachy_Tubes_bead |
SA193601 | 0427_PP_Tachy_Tubes_T1_4 | PP_Tachy_Tubes_bead |
SA193602 | 0427_PP_Tachy_Tubes_T1_1 | PP_Tachy_Tubes_bead |
SA193603 | 0427_PP_Tachy_Tubes_T1_3 | PP_Tachy_Tubes_bead |
SA193604 | 0424_PP_Tachy_Tubes_T1_2 | PP_Tachy_Tubes_bead |
SA193605 | 0424_PP_Tachy_Tubes_T1_3 | PP_Tachy_Tubes_bead |
SA193606 | 0424_PP_Tachy_Tubes_T1_1 | PP_Tachy_Tubes_bead |
SA193607 | 0424_PP_Tachy_Tubes_T1_4 | PP_Tachy_Tubes_bead |