Summary of Study ST002465
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001468. The data can be accessed directly via it's Project DOI: 10.21228/M8ZT5R This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST002465 |
| Study Title | Map of microbially induced metabolic changes across diverse body sites in mice - Mouse Data |
| Study Summary | Tissue samples from contents along the intestinal tract and systemic sites in mice that did not have any bacteria (germ free) or colonized with a simplified microbiota or more complex microbiota. |
| Institute | University of Calgary |
| Department | Physiology and Pharmacology |
| Laboratory | McCoy |
| Last Name | Brown |
| First Name | Kirsty |
| Address | 3330 Hospital Dr NW |
| kirsty.brown12@gmail.com; kathy.mccoy@ucalgary.ca | |
| Phone | 2508692232 |
| Submit Date | 2023-02-04 |
| Total Subjects | 72 |
| Num Males | 36 |
| Num Females | 36 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | mzXML |
| Analysis Type Detail | LC-MS |
| Release Date | 2023-02-05 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Mammal; Subject species: Mus musculus (Factor headings shown in green)
| mb_sample_id | local_sample_id | Site | Microbiota | Age(weeks) | Sex |
|---|---|---|---|---|---|
| SA246529 | cec_gf_12_F_1 | Cecum_content | gf | 12 | F |
| SA246530 | cec_gf_12_F_4 | Cecum_content | gf | 12 | F |
| SA246531 | cec_gf_12_F_3 | Cecum_content | gf | 12 | F |
| SA246532 | cec_gf_12_F_2 | Cecum_content | gf | 12 | F |
| SA246533 | cec_gf_12_M_4 | Cecum_content | gf | 12 | M |
| SA246534 | cec_gf_12_M_1 | Cecum_content | gf | 12 | M |
| SA246535 | cec_gf_12_M_3 | Cecum_content | gf | 12 | M |
| SA246536 | cec_gf_12_M_2 | Cecum_content | gf | 12 | M |
| SA246537 | cec_gf_3_F_4 | Cecum_content | gf | 3 | F |
| SA246538 | cec_gf_3_F_1 | Cecum_content | gf | 3 | F |
| SA246539 | cec_gf_3_F_3 | Cecum_content | gf | 3 | F |
| SA246540 | cec_gf_3_F_2 | Cecum_content | gf | 3 | F |
| SA246541 | cec_gf_3_M_4 | Cecum_content | gf | 3 | M |
| SA246542 | cec_gf_3_M_3 | Cecum_content | gf | 3 | M |
| SA246543 | cec_gf_3_M_2 | Cecum_content | gf | 3 | M |
| SA246544 | cec_gf_3_M_1 | Cecum_content | gf | 3 | M |
| SA246545 | cec_gf_8_F_4 | Cecum_content | gf | 8 | F |
| SA246546 | cec_gf_8_F_3 | Cecum_content | gf | 8 | F |
| SA246547 | cec_gf_8_F_2 | Cecum_content | gf | 8 | F |
| SA246548 | cec_gf_8_F_1 | Cecum_content | gf | 8 | F |
| SA246549 | cec_gf_8_M_4 | Cecum_content | gf | 8 | M |
| SA246550 | cec_gf_8_M_3 | Cecum_content | gf | 8 | M |
| SA246551 | cec_gf_8_M_1 | Cecum_content | gf | 8 | M |
| SA246552 | cec_gf_8_M_2 | Cecum_content | gf | 8 | M |
| SA246553 | cec_sdm_12_F_4 | Cecum_content | sdm | 12 | F |
| SA246554 | cec_sdm_12_F_1 | Cecum_content | sdm | 12 | F |
| SA246555 | cec_sdm_12_F_3 | Cecum_content | sdm | 12 | F |
| SA246556 | cec_sdm_12_F_2 | Cecum_content | sdm | 12 | F |
| SA246557 | cec_sdm_12_M_4 | Cecum_content | sdm | 12 | M |
| SA246558 | cec_sdm_12_M_1 | Cecum_content | sdm | 12 | M |
| SA246559 | cec_sdm_12_M_3 | Cecum_content | sdm | 12 | M |
| SA246560 | cec_sdm_12_M_2 | Cecum_content | sdm | 12 | M |
| SA246561 | cec_sdm_3_F_4 | Cecum_content | sdm | 3 | F |
| SA246562 | cec_sdm_3_F_3 | Cecum_content | sdm | 3 | F |
| SA246563 | cec_sdm_3_F_2 | Cecum_content | sdm | 3 | F |
| SA246564 | cec_sdm_3_F_1 | Cecum_content | sdm | 3 | F |
| SA246565 | cec_sdm_3_M_4 | Cecum_content | sdm | 3 | M |
| SA246566 | cec_sdm_3_M_3 | Cecum_content | sdm | 3 | M |
| SA246567 | cec_sdm_3_M_2 | Cecum_content | sdm | 3 | M |
| SA246568 | cec_sdm_3_M_1 | Cecum_content | sdm | 3 | M |
| SA246569 | cec_sdm_8_F_4 | Cecum_content | sdm | 8 | F |
| SA246570 | cec_sdm_8_F_3 | Cecum_content | sdm | 8 | F |
| SA246571 | cec_sdm_8_F_1 | Cecum_content | sdm | 8 | F |
| SA246572 | cec_sdm_8_F_2 | Cecum_content | sdm | 8 | F |
| SA246573 | cec_sdm_8_M_3 | Cecum_content | sdm | 8 | M |
| SA246574 | cec_sdm_8_M_4 | Cecum_content | sdm | 8 | M |
| SA246575 | cec_sdm_8_M_2 | Cecum_content | sdm | 8 | M |
| SA246576 | cec_sdm_8_M_1 | Cecum_content | sdm | 8 | M |
| SA246577 | cec_spf_12_F_3 | Cecum_content | spf | 12 | F |
| SA246578 | cec_spf_12_F_4 | Cecum_content | spf | 12 | F |
| SA246579 | cec_spf_12_F_2 | Cecum_content | spf | 12 | F |
| SA246580 | cec_spf_12_F_1 | Cecum_content | spf | 12 | F |
| SA246581 | cec_spf_12_M_4 | Cecum_content | spf | 12 | M |
| SA246582 | cec_spf_12_M_3 | Cecum_content | spf | 12 | M |
| SA246583 | cec_spf_12_M_2 | Cecum_content | spf | 12 | M |
| SA246584 | cec_spf_3_F_4 | Cecum_content | spf | 3 | F |
| SA246585 | cec_spf_3_F_3 | Cecum_content | spf | 3 | F |
| SA246586 | cec_spf_3_F_2 | Cecum_content | spf | 3 | F |
| SA246587 | cec_spf_3_F_1 | Cecum_content | spf | 3 | F |
| SA246588 | cec_spf_3_M_4 | Cecum_content | spf | 3 | M |
| SA246589 | cec_spf_3_M_3 | Cecum_content | spf | 3 | M |
| SA246590 | cec_spf_3_M_1 | Cecum_content | spf | 3 | M |
| SA246591 | cec_spf_3_M_2 | Cecum_content | spf | 3 | M |
| SA246592 | cec_spf_8_F_4 | Cecum_content | spf | 8 | F |
| SA246593 | cec_spf_8_F_1 | Cecum_content | spf | 8 | F |
| SA246594 | cec_spf_8_F_3 | Cecum_content | spf | 8 | F |
| SA246595 | cec_spf_8_F_2 | Cecum_content | spf | 8 | F |
| SA246596 | cec_spf_8_M_4 | Cecum_content | spf | 8 | M |
| SA246597 | cec_spf_8_M_1 | Cecum_content | spf | 8 | M |
| SA246598 | cec_spf_8_M_3 | Cecum_content | spf | 8 | M |
| SA246599 | cec_spf_8_M_2 | Cecum_content | spf | 8 | M |
| SA246600 | col_gf_12_F_4 | Colon_content | gf | 12 | F |
| SA246601 | col_gf_12_F_3 | Colon_content | gf | 12 | F |
| SA246602 | col_gf_12_F_2 | Colon_content | gf | 12 | F |
| SA246603 | col_gf_12_F_1 | Colon_content | gf | 12 | F |
| SA246604 | col_gf_12_M_4 | Colon_content | gf | 12 | M |
| SA246605 | col_gf_12_M_2 | Colon_content | gf | 12 | M |
| SA246606 | col_gf_12_M_3 | Colon_content | gf | 12 | M |
| SA246607 | col_gf_12_M_1 | Colon_content | gf | 12 | M |
| SA246608 | col_gf_3_F_4 | Colon_content | gf | 3 | F |
| SA246609 | col_gf_3_F_3 | Colon_content | gf | 3 | F |
| SA246610 | col_gf_3_F_1 | Colon_content | gf | 3 | F |
| SA246611 | col_gf_3_F_2 | Colon_content | gf | 3 | F |
| SA246612 | col_gf_3_M_4 | Colon_content | gf | 3 | M |
| SA246613 | col_gf_3_M_1 | Colon_content | gf | 3 | M |
| SA246614 | col_gf_3_M_3 | Colon_content | gf | 3 | M |
| SA246615 | col_gf_3_M_2 | Colon_content | gf | 3 | M |
| SA246616 | col_gf_8_F_4 | Colon_content | gf | 8 | F |
| SA246617 | col_gf_8_F_1 | Colon_content | gf | 8 | F |
| SA246618 | col_gf_8_F_3 | Colon_content | gf | 8 | F |
| SA246619 | col_gf_8_F_2 | Colon_content | gf | 8 | F |
| SA246620 | col_gf_8_M_4 | Colon_content | gf | 8 | M |
| SA246621 | col_gf_8_M_3 | Colon_content | gf | 8 | M |
| SA246622 | col_gf_8_M_2 | Colon_content | gf | 8 | M |
| SA246623 | col_gf_8_M_1 | Colon_content | gf | 8 | M |
| SA246624 | col_sdm_12_F_3 | Colon_content | sdm | 12 | F |
| SA246625 | col_sdm_12_F_1 | Colon_content | sdm | 12 | F |
| SA246626 | col_sdm_12_F_2 | Colon_content | sdm | 12 | F |
| SA246627 | col_sdm_12_M_1 | Colon_content | sdm | 12 | M |
| SA246628 | col_sdm_12_M_4 | Colon_content | sdm | 12 | M |
