Summary of Study ST003604

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR002231. The data can be accessed directly via it's Project DOI: 10.21228/M87R79 This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

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Study IDST003604
Study TitleInvestigation of global metabolites and E coli-derived metabolites following engulfment of dead bacteria by wild type or RagAGTP-expressing bone marrow derived macrophages.
Study SummaryGlobal metabolomics and 13C-tracing analysis of wild type or RagAGTP-expressing bone marrow derived macrophages exposed to heat-killed uniformly 13C-labelled E. coli in a trans-well system for 6h or 18h.
Institute
University of Colorado Anschutz Medical Campus
Last NameHaines
First NameJulie
Address12801 E 17th Ave, Room 1303, Aurora, Colorado, 80045, USA
Emailjulie.haines@cuanschutz.edu
Phone3037243339
Submit Date2024-11-25
Raw Data AvailableYes
Raw Data File Type(s)raw(Thermo)
Analysis Type DetailLC-MS
Release Date2024-12-27
Release Version1
Julie Haines Julie Haines
https://dx.doi.org/10.21228/M87R79
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

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Factors:

Subject type: Cultured cells; Subject species: Mus musculus (Factor headings shown in green)

mb_sample_id local_sample_id time (h) Dead E coli treatment inhibitor Sample source genotype
SA392583CT RagA GTP 10 no none murine bone marrow derived macrophages RagA GTP mutant
SA392584CT RagA GTP 40 no none murine bone marrow derived macrophages RagA GTP mutant
SA392585CT RagA GTP 30 no none murine bone marrow derived macrophages RagA GTP mutant
SA392586CT RagA GTP 20 no none murine bone marrow derived macrophages RagA GTP mutant
SA392587CT WT 4 + Conca0 no none murine bone marrow derived macrophages WT
SA392588CT WT 3 + Conca0 no none murine bone marrow derived macrophages WT
SA392589CT WT 2 + Conca0 no none murine bone marrow derived macrophages WT
SA392590CT WT 1 + Conca0 no none murine bone marrow derived macrophages WT
SA392591CT WT 20 no none murine bone marrow derived macrophages WT
SA392592CT WT 10 no none murine bone marrow derived macrophages WT
SA392593CT WT 30 no none murine bone marrow derived macrophages WT
SA392594CT WT 40 no none murine bone marrow derived macrophages WT
SA392595WT 4 18h + Conca18 yes 150 nM concanamycin A murine bone marrow derived macrophages WT
SA392596WT3 18h + Conca18 yes 150 nM concanamycin A murine bone marrow derived macrophages WT
SA392597WT 2 18h + Conca18 yes 150 nM concanamycin A murine bone marrow derived macrophages WT
SA392598WT 1 18h + Conca18 yes 150 nM concanamycin A murine bone marrow derived macrophages WT
SA392599WT 4 18h + Bafilo18 yes 50 nM bafilomycin A1 murine bone marrow derived macrophages WT
SA392600WT3 18h + Bafilo18 yes 50 nM bafilomycin A1 murine bone marrow derived macrophages WT
SA392601WT 2 18h + Bafilo18 yes 50 nM bafilomycin A1 murine bone marrow derived macrophages WT
SA392602WT 1 18h + Bafilo18 yes 50 nM bafilomycin A1 murine bone marrow derived macrophages WT
SA392603RagA GTP 3 18h18 yes none murine bone marrow derived macrophages RagA GTP mutant
SA392604RagA GTP 1 18h18 yes none murine bone marrow derived macrophages RagA GTP mutant
SA392605RagA GTP 2 18h18 yes none murine bone marrow derived macrophages RagA GTP mutant
SA392606RagA GTP 4 18h18 yes none murine bone marrow derived macrophages RagA GTP mutant
SA392607WT3 18h18 yes none murine bone marrow derived macrophages WT
SA392608WT 4 18h18 yes none murine bone marrow derived macrophages WT
SA392609WT 1 18h18 yes none murine bone marrow derived macrophages WT
SA392610WT 2 18h18 yes none murine bone marrow derived macrophages WT
SA392611WT 1 6h + Conca6 yes 150 nM concanamycin A murine bone marrow derived macrophages WT
SA392612WT 2 6h + Conca6 yes 150 nM concanamycin A murine bone marrow derived macrophages WT
SA392613WT 3 6h + Conca6 yes 150 nM concanamycin A murine bone marrow derived macrophages WT
SA392614WT 4 6h + Conca6 yes 150 nM concanamycin A murine bone marrow derived macrophages WT
SA392615WT 2 6h + Bafilo6 yes 50 nM bafilomycin A1 murine bone marrow derived macrophages WT
SA392616WT 4 6h + Bafilo6 yes 50 nM bafilomycin A1 murine bone marrow derived macrophages WT
SA392617WT 3 6h + Bafilo6 yes 50 nM bafilomycin A1 murine bone marrow derived macrophages WT
SA392618WT 1 6h + Bafilo6 yes 50 nM bafilomycin A1 murine bone marrow derived macrophages WT
SA392619RagA GTP 2 6h6 yes none murine bone marrow derived macrophages RagA GTP mutant
SA392620RagA GTP 3 6h6 yes none murine bone marrow derived macrophages RagA GTP mutant
SA392621RagA GTP 1 6h6 yes none murine bone marrow derived macrophages RagA GTP mutant
SA392622RagA GTP 4 6h6 yes none murine bone marrow derived macrophages RagA GTP mutant
SA392623WT 2 6h6 yes none murine bone marrow derived macrophages WT
SA392624WT 4 6h6 yes none murine bone marrow derived macrophages WT
SA392625WT 3 6h6 yes none murine bone marrow derived macrophages WT
SA392626WT 1 6h6 yes none murine bone marrow derived macrophages WT
Showing results 1 to 44 of 44
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