Summary of Study ST000918

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000634. The data can be accessed directly via it's Project DOI: 10.21228/M8QM3R This work is supported by NIH grant, U2C- DK119886.

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This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

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Study IDST000918
Study TitlePlasma metabolic fingerprint for breast cancer (MS) - part I
Study Typecontrol - case
Study SummaryBreast cancer is a highly heterogeneous disease associated with metabolic reprogramming. The shifts in the metabolome caused by breast cancer still lack data from Latin populations of Hispanic origin. In this pilot study, metabolomic and lipidomic approaches were performed to establish a plasma metabolic fingerprint of Colombian Hispanic women with breast cancer. NMR, GC-MS and LC-MS datasets were combined and compared. Statistics showed discrimination between breast cancer and healthy subjects on all analytical platforms.
Institute
Universidad de los Andes, Colombia
DepartmentChemistry
Last NameCala
First NameMonica
AddressCra. 1 #18a-12
Emailmp.cala10@uniandes.edu.co
Phone+571 3394949
Submit Date2017-12-29
Num Groups2
Total Subjects58
Analysis Type DetailGC-MS/LC-MS
Release Date2018-02-07
Release Version1
Monica Cala Monica Cala
https://dx.doi.org/10.21228/M8QM3R
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:


Combined analysis:

Analysis ID AN001503 AN001504 AN001505
Analysis type MS MS MS
Chromatography type GC Reversed phase Reversed phase
Chromatography system Agilent Agilent 1200 Agilent 1200
Column Zebron ZB-5MSi capillary GC Phenomenex Kinetex C18 (150 x 2.1mm,2.6um) Phenomenex Kinetex C18 (150 x 2.1mm,2.6um)
MS Type EI ESI ESI
MS instrument type Single quadrupole QTOF QTOF
MS instrument name Agilent 5973 Agilent 6530 QTOF Agilent 6530 QTOF
Ion Mode POSITIVE POSITIVE NEGATIVE
Units peak area peak area peak area

MS:

MS ID:MS001386
Analysis ID:AN001503
Instrument Name:Agilent 5973
Instrument Type:Single quadrupole
MS Type:EI
Ion Mode:POSITIVE
Helium Flow:1.0 mL/min
Ion Source Temperature:150 C
Ionization:Electron ionization
Ionization Energy:70 eV
Source Temperature:230 ÂșC
Scan Range Moverz:50 - 600
Scanning:1.38 scan/s
  
MS ID:MS001387
Analysis ID:AN001504
Instrument Name:Agilent 6530 QTOF
Instrument Type:QTOF
MS Type:ESI
Ion Mode:POSITIVE
Capillary Voltage:3500 V
Scan Range Moverz:100 / 1200 m/z
Scanning:1.38 scan/s
  
MS ID:MS001388
Analysis ID:AN001505
Instrument Name:Agilent 6530 QTOF
Instrument Type:QTOF
MS Type:ESI
Ion Mode:NEGATIVE
Capillary Voltage:4000 V
Scan Range Moverz:100 / 1200 m/z
Scanning:1.38 scan/s
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