Summary of Study ST001231
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000824. The data can be accessed directly via it's Project DOI: 10.21228/M85Q5K This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST001231 |
| Study Title | Plasma untargeted metabolomics study of pulmonary tuberculosis |
| Study Summary | In this study, differentially abundant plasma metabolites were screened by using the ultra-high performance liquid chromatography coupled with Q Exactive mass spectrometry in pulmonary tuberculosis(TB) patients and normal controls(NC) or patients with other pulmonary diseases such as, community-acquired pneumonia(CAP) and lung cancer(LC). |
| Institute | Zhengjiang University |
| Department | School of Medicine |
| Laboratory | Institute of Cell Biology |
| Last Name | Li |
| First Name | Ji-Cheng |
| Address | 866 Yuhangtang Road, West Lake District, Hangzhou, Zhejiang Province, 310058, PR China |
| lijichen@zju.edu.cn | |
| Phone | +86-571-88208088 |
| Submit Date | 2019-08-05 |
| Raw Data File Type(s) | raw(Thermo) |
| Analysis Type Detail | LC-MS |
| Release Date | 2020-12-01 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Combined analysis:
| Analysis ID | AN002048 | AN002049 |
|---|---|---|
| Analysis type | MS | MS |
| Chromatography type | Reversed phase | Reversed phase |
| Chromatography system | Waters Acquity | Waters Acquity |
| Column | Waters Acquity BEH HSS T3 (100 x 2.1mm,1.8um) | Waters Acquity BEH HSS T3 (100 x 2.1mm,1.8um) |
| MS Type | ESI | ESI |
| MS instrument type | Orbitrap | Orbitrap |
| MS instrument name | Thermo Q Exactive Orbitrap | Thermo Q Exactive Orbitrap |
| Ion Mode | NEGATIVE | POSITIVE |
| Units | peak area | peak area |
MS:
| MS ID: | MS001900 |
| Analysis ID: | AN002048 |
| Instrument Name: | Thermo Q Exactive Orbitrap |
| Instrument Type: | Orbitrap |
| MS Type: | ESI |
| MS Comments: | mass range(m/z):70-1000 Convert the mass spectrometry raw data to the mzML format. Then do retention time correction, peak identification, peak extraction, peak integration, peak alignment, etc., and finally compare the database for material identification. ProteoWizard,XCMS,OSI-SMMS,in-house MS/MS database |
| Ion Mode: | NEGATIVE |
| MS ID: | MS001901 |
| Analysis ID: | AN002049 |
| Instrument Name: | Thermo Q Exactive Orbitrap |
| Instrument Type: | Orbitrap |
| MS Type: | ESI |
| MS Comments: | mass range(m/z):70-1000 Convert the mass spectrometry raw data to the mzML format. Then do retention time correction, peak identification, peak extraction, peak integration, peak alignment, etc., and finally compare the database for material identification. ProteoWizard,XCMS,OSI-SMMS,in-house MS/MS database |
| Ion Mode: | POSITIVE |
