Summary of Study ST001794

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001138. The data can be accessed directly via it's Project DOI: 10.21228/M8M68K This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

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Study IDST001794
Study TitleMetabolomics Analysis of Time-Series Gastrointestinal Lumen Samples
Study SummarySamples were retrieved from a human small intestine samples over 8 hours. Metabolomics analysis followed resulting in many annotated metabolites. Intensity profiles gives insight into gastrointestinal functions.
Institute
University of California, Davis
Last NameFolz
First NameJacob
Address451 Health Science Drive
Emailjfolz@ucdavis.edu
Phone7155636311
Submit Date2021-05-17
Total Subjects1
Num Males1
Raw Data AvailableYes
Raw Data File Type(s)mzML
Analysis Type DetailLC-MS
Release Date2021-06-01
Release Version1
Jacob Folz Jacob Folz
https://dx.doi.org/10.21228/M8M68K
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:

Combined analysis:

Analysis ID AN002911 AN002912 AN002913 AN002914
Analysis type MS MS MS MS
Chromatography type HILIC HILIC Reversed phase Reversed phase
Chromatography system Thermo Vanquish Thermo Vanquish Thermo Vanquish Thermo Vanquish
Column Waters Acquity BEH Amide (150 x 2.1mm,1.7um) Waters Acquity BEH Amide (150 x 2.1mm,1.7um) Waters Acquity CSH C18 (100 x 2.1mm,1.7um) Waters Acquity CSH C18 (100 x 2.1mm,1.7um)
MS Type ESI ESI ESI ESI
MS instrument type Orbitrap Orbitrap Orbitrap Orbitrap
MS instrument name Thermo Q Exactive Plus Orbitrap Thermo Q Exactive Plus Orbitrap Thermo Q Exactive Plus Orbitrap Thermo Q Exactive Plus Orbitrap
Ion Mode POSITIVE NEGATIVE POSITIVE NEGATIVE
Units Peak Height Intensity Peak Height Intensity Peak Height Intensity Peak Height Intensity

MS:

MS ID:MS002703
Analysis ID:AN002911
Instrument Name:Thermo Q Exactive Plus Orbitrap
Instrument Type:Orbitrap
MS Type:ESI
MS Comments:LC-MS/MS data was processed using open source software MS-DIAL (version 4.24) which performed peak picking, deisotoping, automated peak annotation, alignment and gap filling.
Ion Mode:POSITIVE
  
MS ID:MS002704
Analysis ID:AN002912
Instrument Name:Thermo Q Exactive Plus Orbitrap
Instrument Type:Orbitrap
MS Type:ESI
MS Comments:LC-MS/MS data was processed using open source software MS-DIAL (version 4.24) which performed peak picking, deisotoping, automated peak annotation, alignment and gap filling.
Ion Mode:NEGATIVE
  
MS ID:MS002705
Analysis ID:AN002913
Instrument Name:Thermo Q Exactive Plus Orbitrap
Instrument Type:Orbitrap
MS Type:ESI
MS Comments:LC-MS/MS data was processed using open source software MS-DIAL (version 4.24) which performed peak picking, deisotoping, automated peak annotation, alignment and gap filling.
Ion Mode:POSITIVE
  
MS ID:MS002706
Analysis ID:AN002914
Instrument Name:Thermo Q Exactive Plus Orbitrap
Instrument Type:Orbitrap
MS Type:ESI
MS Comments:LC-MS/MS data was processed using open source software MS-DIAL (version 4.24) which performed peak picking, deisotoping, automated peak annotation, alignment and gap filling.
Ion Mode:NEGATIVE
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