Summary of Study ST003253

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR002019. The data can be accessed directly via it's Project DOI: 10.21228/M8N23M This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

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Study IDST003253
Study TitleMetabolomics studies on mouse liver samples on a Western diet
Study SummaryTargeted metabolomics was performed using liquid chromatography-tandem mass spectrometry (LC-MS/MS).to measure polar metabolites in both positive and negative ionization mode on cardiac mice tissue acquired after a 30 week dietary intervention.
Institute
University of Sydney
DepartmentSchool of Medical Sciences
LaboratoryCardiometabolic Disease
Last NameLiu
First NameRenping
AddressCharles Perkins Centre
Emailrenping.liu@sydney.edu.au
Phone+61432953638
Submit Date2024-05-03
Num Groups4
Total Subjects35
Num Males35
Raw Data AvailableYes
Raw Data File Type(s)mzML
Analysis Type DetailAPI-MS
Release Date2024-08-26
Release Version1
Renping Liu Renping Liu
https://dx.doi.org/10.21228/M8N23M
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:

Combined analysis:

Analysis ID AN005330 AN005331 AN005332
Chromatography ID CH004032 CH004033 CH004034
MS ID MS005060 MS005061 MS005062
Analysis type MS MS MS
Chromatography type Reversed phase HILIC HILIC
Chromatography system Agilent 1260 Agilent 1260 Agilent 1260
Column Waters Atlantis T3 (150 x 4.6mm,5um) Waters XBridge BEH Amide (100 x 2.1mm,2.5um) Waters XBridge BEH Amide (100 x 2.1mm,2.5um)
MS Type API API API
MS instrument type Triple quadrupole Triple quadrupole Triple quadrupole
MS instrument name ABI Sciex 6500 QTrap ABI Sciex 6500 QTrap ABI Sciex 6500 QTrap
Ion Mode POSITIVE NEGATIVE NEGATIVE
Units abundance abundance abundance

MS:

MS ID:MS005060
Analysis ID:AN005330
Instrument Name:ABI Sciex 6500 QTrap
Instrument Type:Triple quadrupole
MS Type:API
MS Comments:Targeted metabolite profiling was performed using MS multiple reaction-monitoring transitions. Multiple Reaction Monitoring (MRM) Q1/Q3 peak integration of the raw data files (Analyst software, v.1.6.2; ABSciex) was performed using software MultiQuant 3.0 (ABSciex).
Ion Mode:POSITIVE
  
MS ID:MS005061
Analysis ID:AN005331
Instrument Name:ABI Sciex 6500 QTrap
Instrument Type:Triple quadrupole
MS Type:API
MS Comments:Targeted metabolite profiling was performed using MS multiple reaction-monitoring transitions. Multiple Reaction Monitoring (MRM) Q1/Q3 peak integration of the raw data files (Analyst software, v.1.6.2; ABSciex) was performed using software MultiQuant 3.0 (ABSciex).
Ion Mode:NEGATIVE
  
MS ID:MS005062
Analysis ID:AN005332
Instrument Name:ABI Sciex 6500 QTrap
Instrument Type:Triple quadrupole
MS Type:API
MS Comments:Targeted metabolite profiling was performed using MS multiple reaction-monitoring transitions. Multiple Reaction Monitoring (MRM) Q1/Q3 peak integration of the raw data files (Analyst software, v.1.6.2; ABSciex) was performed using software MultiQuant 3.0 (ABSciex).
Ion Mode:NEGATIVE
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