Summary of Study ST001071
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000717. The data can be accessed directly via it's Project DOI: 10.21228/M80M50 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST001071 |
| Study Title | Guinea Grass Untargeted Metabolomic Profiling |
| Study Type | Treatment comparison |
| Study Summary | Treatment comparison of Guinea grass planted at University of Sao Paulo Brazil 4 Ambient temp and CO2 plots, 4 elevated CO2 (600 ppm) plots, 4 elevated Temp plots (+2C),4 elevated CO2 and Temp plots. Untargeted metabolomics(GC-MS),de novo transcriptomics, and RNAseq taken at 30(A)(2014-05-22) and 50(B)(2014-07-14)days post treatment exposure. Dried leaf material sent to Uni Illinois-UC. GC-MS protocol followed as stated in Ulanov et al. (2010) J of Plant Phys. |
| Institute | University of Illinois Urbana-Champaign |
| Department | Plant Biology |
| Laboratory | Ainsworth USDA ARS Global Change and Photosynthesis Research Unit |
| Last Name | Ainsworth |
| First Name | Elizabeth |
| Address | 1201 W Gregory Dr, Urbana, IL 61801 |
| lisa.ainsworth@ars.usda.gov | |
| Phone | 217-265-9887 |
| Submit Date | 2018-10-09 |
| Num Groups | 4 |
| Total Subjects | 32 (+ 4 techincal replicates) |
| Raw Data File Type(s) | d |
| Analysis Type Detail | GC-MS |
| Release Date | 2018-11-08 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Treatment:
| Treatment ID: | TR001129 |
| Treatment Summary: | Ambient(Amb) : Control plots with ambient [CO2] and ambient temperature elvTemp(T): elevated temperature plots (+2C) and ambient [CO2] elvCO2(eC): elevated [CO2] plots (600ppm) and ambient temperature elvTemp+elvCO2(eCeT): elevated temperature (+2C) and elevated [CO2] (600ppm). Time Point A(2014-05-22) and Time Point B(2014-07-14) |
| Treatment Protocol Comments: | Time Point A(2014-05-22) and Time Point B(2014-07-14) |
| Treatment: | elevated [CO2] and/or elevated temperature |
| Treatment Doseduration: | 30 days and 50days |
| Plant Growth Location: | MiniFACE facility at University of São Paul in Ribeirão Preto, São Paulo Brazil |
| Plant Plot Design: | Complete replicated design (n=4) |
| Plant Light Period: | ambient |
| Plant Harvest Date: | 2014-05-22 |
| Plant Metab Quench Method: | Immersion in liquid N2 within 1 min of harvest |
| Plant Harvest Method: | Youngest fully expanded leaves was cut (PO:0001053), placed in foil, quenched in LN2 |
| Plant Storage: | -80 C, then lyophilized and ground, shipped on dry ice to University of Illinois at Urbana-Champagin were stored in 20 C in falcon tubes |
