Summary of Study ST001067

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench,, where it has been assigned Project ID PR000713. The data can be accessed directly via it's Project DOI: 10.21228/M8HM48 This work is supported by NIH grant, U2C- DK119886.


This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

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Study IDST001067
Study TitleLipidomics analysis for aged mice femoral muscle (part - IV)
Study TypeMS lipidomics analysis
Study SummaryLipidomics studies on samples from aged and young mice.
Takeda Pharmaceutical Company Limited
Last NameAndo
First NameAyumi
Address26-1, Muraoka-Higashi 2-chome, Fujisawa-shi, Kanagawa 251-8555, Japan
Submit Date2018-10-01
Raw Data AvailableYes
Analysis Type DetailLC-MS
Release Date2019-10-11
Release Version1
Ayumi Ando Ayumi Ando application/zip

Select appropriate tab below to view additional metadata details:


Project ID:PR000713
Project DOI:doi: 10.21228/M8HM48
Project Title:Lipidomics analysis for aged mice organs
Project Type:MS lipidomics analysis
Project Summary:Lipidomics analysis for aged mice organs
Institute:Takeda Pharmaceutical Company Limited
Last Name:Ando
First Name:Ayumi
Address:26-1, Muraoka-Higashi 2-chome, Fujisawa-shi, Kanagawa, 251-8555, Japan


Subject ID:SU001111
Subject Type:Mammal
Subject Species:Mus musculus
Taxonomy ID:10090
Genotype Strain:C57BL/6J mice
Age Or Age Range:8 week (“young”) and 112 week (“old”).
Weight Or Weight Range:young: 20.2g (mean), aged: 34.3g (mean)
Animal Animal Supplier:CLEA (Tokyo, Japan)
Animal Light Cycle:a 12-hour light/12-hour dark schedule
Animal Feed:CE-2, CLEA
Animal Water:tap water


Subject type: Mammal; Subject species: Mus musculus (Factor headings shown in green)

mb_sample_id local_sample_id Age Tissue
SA072022Cortex_60_agedAged 112 weeks Cerebral Cortex
SA072023Cortex_58_agedAged 112 weeks Cerebral Cortex
SA072024Cortex_56_agedAged 112 weeks Cerebral Cortex
SA072025Cortex_54_agedAged 112 weeks Cerebral Cortex
SA072026Cortex_52_agedAged 112 weeks Cerebral Cortex
SA072027Adipose_60_agedAged 112 weeks Epididymal adipose tissue
SA072028Adipose_58_agedAged 112 weeks Epididymal adipose tissue
SA072029Adipose_52_agedAged 112 weeks Epididymal adipose tissue
SA072030Adipose_54_agedAged 112 weeks Epididymal adipose tissue
SA072031Adipose_56_agedAged 112 weeks Epididymal adipose tissue
SA072032Femoral_52_agedAged 112 weeks Femoral muscle
SA072033Femoral_58_agedAged 112 weeks Femoral muscle
SA072034Femoral_60_agedAged 112 weeks Femoral muscle
SA072035Femoral_56_agedAged 112 weeks Femoral muscle
SA072036Femoral_54_agedAged 112 weeks Femoral muscle
SA072037Liver_60_agedAged 112 weeks Liver
SA072038Liver_58_agedAged 112 weeks Liver
SA072039Liver_56_agedAged 112 weeks Liver
SA072040Liver_52_agedAged 112 weeks Liver
SA072041Liver_54_agedAged 112 weeks Liver
SA072042Cortex_59_youngYoung 8 weeks Cerebral Cortex
SA072043Cortex_57_youngYoung 8 weeks Cerebral Cortex
SA072044Cortex_51_youngYoung 8 weeks Cerebral Cortex
SA072045Cortex_55_youngYoung 8 weeks Cerebral Cortex
SA072046Cortex_53_youngYoung 8 weeks Cerebral Cortex
SA072047Adipose_59_youngYoung 8 weeks Epididymal adipose tissue
SA072048Adipose_57_youngYoung 8 weeks Epididymal adipose tissue
SA072049Adipose_55_youngYoung 8 weeks Epididymal adipose tissue
SA072050Adipose_51_youngYoung 8 weeks Epididymal adipose tissue
SA072051Adipose_53_youngYoung 8 weeks Epididymal adipose tissue
SA072052Femoral_57_youngYoung 8 weeks Femoral muscle
SA072053Femoral_59_youngYoung 8 weeks Femoral muscle
SA072054Femoral_55_youngYoung 8 weeks Femoral muscle
SA072055Femoral_53_youngYoung 8 weeks Femoral muscle
SA072056Femoral_51_youngYoung 8 weeks Femoral muscle
SA072057Liver_59_youngYoung 8 weeks Liver
SA072058Liver_57_youngYoung 8 weeks Liver
SA072059Liver_55_youngYoung 8 weeks Liver
SA072060Liver_53_youngYoung 8 weeks Liver
SA072061Liver_51_youngYoung 8 weeks Liver
Showing results 1 to 40 of 40


Collection ID:CO001105
Collection Summary:All mice were killed by decapitation for sample collection. Collected tissues were immediately frozen by liquid nitrogen then stored -80 C until use. (Femoral, Cortex, Liver, Adipose) tissues.
Sample Type:Muscle
Storage Conditions:-80℃


Treatment ID:TR001125
Treatment Summary:Tissues were homogenised in isopropanol (100 mg/mL) for lipidomics.

Sample Preparation:

Sampleprep ID:SP001118
Sampleprep Summary:Tissues were homogenised in isopropanol (100 mg/mL) for lipidomics.

Combined analysis:

Analysis ID AN001746 AN001747
Analysis type MS MS
Chromatography type Reversed phase Reversed phase
Chromatography system Orbitrap XL Orbitrap XL
Column Waters XBridge C18 (50 x 2.1mm,3um) Waters XBridge C18 (50 x 2.1mm,3um)
MS instrument type Single quadrupole Single quadrupole
MS instrument name Thermo LTQ XL Thermo LTQ XL
Units peak area peak area


Chromatography ID:CH001233
Chromatography Summary:The liquid chromatography/mass spectrometry system consisted of an Ultimate3000 RSLC system (Thermo Fisher Scientific inc., Sunnyvale, CA, USA) using a gradient elution consisting of mobile phase A (0.01% acetic acid and 1 mM ammonia in MilliQ water) and mobile phase B (0.001% acetic acid and 0.2 mM ammonia in ethanol/isopropanol [3:1])
Instrument Name:Orbitrap XL
Column Name:Waters XBridge C18 (50 x 2.1mm,3um)
Solvent A:100% water; 0.01% acetic acid; 1 mM ammonia
Solvent B:75% ethanol/25% isopropanol; 0.001% acetic acid; 0.2 mM ammonia
Chromatography Type:Reversed phase


MS ID:MS001614
Analysis ID:AN001746
Instrument Name:Thermo LTQ XL
Instrument Type:Single quadrupole
MS ID:MS001615
Analysis ID:AN001747
Instrument Name:Thermo LTQ XL
Instrument Type:Single quadrupole