Summary of Study ST002027

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001287. The data can be accessed directly via it's Project DOI: 10.21228/M8BX22 This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

Perform statistical analysis  |  Show all samples  |  Show named metabolites  |  Download named metabolite data  
Download mwTab file (text)   |  Download mwTab file(JSON)   |  Download data files (Contains raw data)
Study IDST002027
Study TitleMetabolomics Analysis of Blood Plasma and Stool from Six Week Flaxseed Dietary Intervention in Postmenopausal Women (Serum/HILIC)
Study Summary: Samples were taken before and after 6 weeks of flaxseed dietary intervention. Serum and fecal metabolomics were performed to characterize the metabolomic profiles of serum and stool metabolites pre- and post-intervention.
Institute
University of California, Davis
Last Namefolz
First Namejake
Address451 Health Science Drive
Emailjfolz@ucdavis.edu
Phone7155636311
Submit Date2021-12-21
Raw Data AvailableYes
Raw Data File Type(s)raw(Thermo)
Analysis Type DetailLC-MS
Release Date2023-01-02
Release Version1
jake folz jake folz
https://dx.doi.org/10.21228/M8BX22
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:

Project:

Project ID:PR001287
Project DOI:doi: 10.21228/M8BX22
Project Title:Metabolomics Analysis of Blood Plasma and Stool from Six Week Flaxseed Dietary Intervention in Postmenopausal Women
Project Summary:Samples were taken before and after 6 weeks of flaxseed dietary intervention. Serum and fecal metabolomics were performed to characterize the metabolomic profiles of serum and stool metabolites pre- and post-intervention.
Institute:University of California, Davis
Last Name:Folz
First Name:jake
Address:451 Health Science Drive
Email:jfolz@ucdavis.edu
Phone:7155636311

Subject:

Subject ID:SU002109
Subject Type:Human
Subject Species:Homo sapiens
Taxonomy ID:9606

Factors:

Subject type: Human; Subject species: Homo sapiens (Factor headings shown in green)

mb_sample_id local_sample_id Treatment (pre-post)
SA190246RS-02152009Pre-intervention
SA190247RS-02146133Pre-intervention
SA190248RS-02142009Pre-intervention
SA190249RS-02152490Pre-intervention
SA190250RS-02145607Pre-intervention
SA190251RS-02155235Pre-intervention
SA190252RS-02162522Pre-intervention
SA190253RS-02159492Pre-intervention
SA190254RS-02156423Pre-intervention
SA190255RS-02139721Pre-intervention
SA190256RS-02153108Pre-intervention
SA190257RS-02138650Pre-intervention
SA190258RS-02128352Pre-intervention
SA190259RS-02127671Pre-intervention
SA190260RS-02126796Pre-intervention
SA190261RS-02124349Pre-intervention
SA190262RS-02129862Pre-intervention
SA190263RS-02135566Pre-intervention
SA190264RS-02137274Pre-intervention
SA190265RS-02136527Pre-intervention
SA190266RS-02136451Pre-intervention
SA190267RS-02163042Pre-intervention
SA190268RS-02165754Pre-intervention
SA190269RS-02184819Pre-intervention
SA190270RS-02180401Pre-intervention
SA190271RS-02179400Pre-intervention
SA190272RS-02177759Pre-intervention
SA190273RS-02185095Pre-intervention
SA190274RS-02186113Pre-intervention
SA190275RS-02193435Pre-intervention
SA190276RS-02189574Pre-intervention
SA190277RS-02186657Pre-intervention
SA190278RS-02176958Pre-intervention
SA190279RS-02174862Pre-intervention
SA190280RS-02169817Pre-intervention
SA190281RS-02168982Pre-intervention
SA190282RS-02167382Pre-intervention
SA190283RS-02166761Pre-intervention
SA190284RS-02171890Pre-intervention
SA190285RS-02173280Pre-intervention
SA190286RS-02174609Pre-intervention
SA190287RS-02173913Pre-intervention
SA190288RS-02173508Pre-intervention
SA190289RS-02119140Pre-intervention
SA190290RS-02118840Pre-intervention
SA190291RS-02046599Pre-intervention
SA190292RS-02045370Pre-intervention
SA190293RS-02041308Pre-intervention
SA190294RS-02040155Pre-intervention
SA190295RS-02047137Pre-intervention
SA190296RS-02049971Pre-intervention
SA190297RS-02055157Pre-intervention
SA190298RS-02052504Pre-intervention
SA190299RS-02051836Pre-intervention
SA190300RS-02037571Pre-intervention
SA190301RS-02037282Pre-intervention
SA190302RS-02020293Pre-intervention
SA190303RS-02019510Pre-intervention
SA190304RS-02017643Pre-intervention
SA190305RS-01975659Pre-intervention
SA190306RS-02022737Pre-intervention
SA190307RS-02023824Pre-intervention
SA190308RS-02029507Pre-intervention
SA190309RS-02027065Pre-intervention
SA190310RS-02024202Pre-intervention
SA190311RS-02055215Pre-intervention
SA190312RS-02057574Pre-intervention
SA190313RS-02099922Pre-intervention
SA190314RS-02099604Pre-intervention
SA190315RS-02096868Pre-intervention
SA190316RS-02096722Pre-intervention
SA190317RS-02101117Pre-intervention
SA190318RS-02107455Pre-intervention
SA190319RS-02116664Pre-intervention
SA190320RS-02108921Pre-intervention
SA190321RS-02108617Pre-intervention
SA190322RS-02095379Pre-intervention
SA190323RS-02091843Pre-intervention
SA190324RS-02062802Pre-intervention
SA190325RS-02061579Pre-intervention
SA190326RS-02061501Pre-intervention
SA190327RS-02060161Pre-intervention
SA190328RS-02080484Pre-intervention
SA190329RS-02080521Pre-intervention
SA190330RS-02089132Pre-intervention
SA190331RS-02088574Pre-intervention
SA190332RS-02082111Pre-intervention
SA190333RS-02198195Pre-intervention
SA190334RS-02203857Pre-intervention
SA190335RS-02353557Pre-intervention
SA190336RS-02349825Pre-intervention
SA190337RS-02349202Pre-intervention
SA190338RS-02348475Pre-intervention
SA190339RS-02353973Pre-intervention
SA190340RS-02505087Pre-intervention
SA190341RS-02621406Pre-intervention
SA190342RS-02620835Pre-intervention
SA190343RS-02613837Pre-intervention
SA190344RS-02583622Pre-intervention
SA190345RS-02348427Pre-intervention
Showing page 1 of 4     Results:    1  2  3  4  Next     Showing results 1 to 100 of 356

Collection:

Collection ID:CO002102
Collection Summary:: Samples were taken before and after 6 weeks of flaxseed dietary intervention. Serum and fecal metabolomics were performed to characterize the metabolomic profiles of serum and stool metabolites pre- and post-intervention.
Sample Type:Blood (serum)

Treatment:

Treatment ID:TR002121
Treatment Summary:: Samples were taken before and after 6 weeks of flaxseed dietary intervention. Serum and fecal metabolomics were performed to characterize the metabolomic profiles of serum and stool metabolites pre- and post-intervention.

Sample Preparation:

Sampleprep ID:SP002115
Sampleprep Summary:: Samples were taken before and after 6 weeks of flaxseed dietary intervention. Serum and fecal metabolomics were performed to characterize the metabolomic profiles of serum and stool metabolites pre- and post-intervention.

Combined analysis:

Analysis ID AN003297
Analysis type MS
Chromatography type HILIC
Chromatography system Vanquish
Column Waters Acquity UPLC BEH amide,(150 x 2.1mm,1.7um)
MS Type ESI
MS instrument type Orbitrap
MS instrument name Thermo Q Exactive HF hybrid Orbitrap
Ion Mode POSITIVE
Units normalized peak height

Chromatography:

Chromatography ID:CH002436
Instrument Name:Vanquish
Column Name:Waters Acquity UPLC BEH amide,(150 x 2.1mm,1.7um)
Chromatography Type:HILIC

MS:

MS ID:MS003067
Analysis ID:AN003297
Instrument Name:Thermo Q Exactive HF hybrid Orbitrap
Instrument Type:Orbitrap
MS Type:ESI
MS Comments:A Thermo Q-Exactive HF Orbitrap MS instrument was operated in positive and negative ESI mdoes respectively with the following parameters: mass range 60−900 m/z; spray voltage 3.6kV (ESI+) and −3kV (ESI−), sheath gas (nitrogen) flow rate 60 units; auxiliary gas (nitrogen) flow rate 25 units, capillary temperature 320 ◦C, full scan MS1 mass resolving power 60,000, data-dependent MSMS (dd-MSMS) 4 scans per cycle, normalized collision energy at 20%, 30%, and 40%, dd-MSMS mass resolving power 15,000. Thermo Xcalibur 4.0.27.19 was used for data acquisition and analysis. Instruments was tuned and calibrated by manufacturer’s recommendations.
Ion Mode:POSITIVE
  logo