Clustering data with hclust algorithm for (Study ST002086)

(Analysis AN003404)
MetaboliteStructureF1F2F3F4F5F6F7F8F9F10F11F12
FreeChol,VLDL-5ME4839160.811.071.171.031.140.991.260.940.821.020.900.79
FreeChol,HDL-4ME4839630.980.910.830.920.830.940.991.231.001.161.141.10
FreeChol,LDL-5ME4839381.200.980.930.970.961.020.921.001.010.980.921.09
Apo-B,LDL-5ME4839501.271.010.960.990.991.030.910.970.970.950.871.06
LDL-5ParticleNumberME4838791.271.010.960.990.991.030.910.970.970.950.871.06
Chol,LDL-5ME4839321.280.990.930.980.961.030.920.980.980.960.881.09
Phos,LDL-5ME4839441.270.990.950.990.961.020.930.980.980.950.891.07
FreeChol,LDL-6ME4839391.180.950.880.980.941.000.981.040.991.060.911.09
Chol,LDL-6ME4839331.200.980.901.001.021.030.961.000.961.040.851.05
Phos,LDL-6ME4839451.170.980.911.001.011.020.981.000.951.030.871.04
Apo-B,LDL-6ME4839511.180.980.931.001.021.010.981.010.961.040.851.02
LDL-6ParticleNumberME4838801.180.980.921.001.021.010.981.010.961.040.851.02
TG,LDL-4ME4839251.161.051.100.981.071.050.840.920.980.930.960.94
TG,LDL-5ME4839261.261.031.061.011.091.030.870.920.920.950.860.96
TG,LDL-6ME4839271.231.031.001.011.061.040.930.980.921.000.810.96
Phos,LDL-2ME4839410.990.980.960.890.861.091.060.891.141.021.021.12
Apo-B,LDL-2ME4839471.000.990.980.890.871.101.050.871.151.011.011.10
LDL-2ParticleNumberME4838761.000.990.980.890.871.101.050.871.151.011.011.10
Chol,LDL-2ME4839290.990.970.950.880.831.111.070.871.161.021.011.15
FreeChol,LDL-2ME4839350.990.960.930.890.861.091.070.881.131.041.021.14
Phos,LDL-3ME4839421.010.950.870.900.861.081.040.991.081.071.051.14
Apo-B,LDL-3ME4839481.020.950.880.900.881.091.030.971.071.061.031.13
LDL-3ParticleNumberME4838771.020.950.880.900.881.091.030.971.071.061.031.13
Chol,LDL-3ME4839301.010.930.830.880.831.091.050.991.081.091.051.18
FreeChol,LDL-3ME4839360.980.920.850.910.871.061.040.991.101.101.061.15
Apo-B100/Apo-A1ME4838701.071.001.050.951.031.030.980.961.040.940.921.01
LDL-Chol/HDL-CholME4838691.100.961.020.930.981.030.980.991.060.960.941.05
TG,LDLME4838831.081.021.060.961.041.040.970.921.001.000.960.94
TG,LDL-2ME4839231.011.021.050.921.041.091.000.851.021.011.000.96
TG,LDL-3ME4839241.011.051.060.941.051.070.990.881.040.960.990.95
TG,LDL-1ME4839220.921.041.090.881.061.031.040.931.021.061.040.86
Chol,LDL-1ME4839280.961.000.950.880.971.111.030.961.001.081.051.02
FreeChol,LDL-1ME4839340.980.990.940.880.961.091.030.960.991.091.051.04
Phos,LDL-1ME4839400.961.010.970.890.991.091.030.961.001.071.051.00
Apo-B,LDL-1ME4839460.961.020.990.891.021.101.020.941.001.061.040.98
LDL-1ParticleNumberME4838750.961.020.990.891.021.101.020.941.001.061.040.98
Apo-B,LDL-4ME4839491.160.980.870.920.941.050.941.040.971.031.011.09
LDL-4ParticleNumberME4838781.160.980.870.920.941.050.941.040.971.031.011.09
FreeChol,LDL-4ME4839371.110.960.850.930.901.050.961.041.031.051.031.12
Chol,LDL-4ME4839311.160.960.840.920.881.050.951.070.991.041.021.13
Phos,LDL-4ME4839431.140.970.870.930.911.040.941.060.991.041.031.11
Apo-B100ME4838681.100.990.960.940.971.051.000.981.001.030.961.03
TotalApoBParticleNumberME4838711.100.990.960.940.971.051.000.981.001.030.961.03
Apo-B,LDLME4839011.100.990.940.930.971.060.990.971.011.030.961.05
LDLParticleNumberME4838741.100.990.940.930.971.060.990.971.011.030.961.05
CholME4838631.080.980.910.940.941.051.021.000.961.070.991.06
Chol,LDLME4838871.090.970.910.920.921.071.000.981.031.040.981.10
LDL-CholME4838641.090.970.910.920.921.071.000.981.031.040.981.10
FreeChol,LDLME4838911.070.970.920.920.931.061.010.991.031.050.991.09
Phos,LDLME4838951.080.980.920.930.931.061.000.981.021.040.991.07
Chol,HDL-3ME4839580.990.990.830.970.971.001.031.040.951.091.121.05
Apo-A1,HDL-3ME4839701.011.000.870.980.981.001.051.020.931.071.101.00
Phos,HDL-3ME4839661.011.010.850.981.001.001.021.030.911.071.131.00
Apo-A2,HDL-3ME4839741.051.010.830.971.021.011.001.010.901.071.091.03
FreeChol,HDL-2ME4839611.041.010.800.980.981.041.001.000.901.091.091.09
Chol,HDL-2ME4839571.021.010.871.010.981.041.030.940.941.051.061.05
Apo-A1,HDL-2ME4839691.011.030.911.001.011.021.030.960.941.061.040.98
Phos,HDL-2ME4839651.031.030.891.021.011.041.030.930.901.031.071.00
FreeChol,HDLME4838921.020.960.900.980.911.011.061.000.971.091.031.07
Apo-A2ME4838671.020.990.880.970.981.001.001.040.951.081.051.04
Apo-A2,HDLME4838981.021.000.880.980.991.011.001.030.961.071.041.03
Chol,HDLME4838881.001.000.890.980.961.031.010.980.971.081.041.06
HDL-CholME4838651.001.000.890.980.961.031.010.980.971.081.041.06
Phos,HDLME4838961.011.010.900.990.971.021.021.000.931.071.061.01
Apo-A1ME4838661.020.990.910.990.951.011.021.010.961.081.041.03
Apo-A1,HDLME4838971.020.990.920.990.951.011.011.000.971.071.041.02
FreeChol,HDL-3ME4839621.060.960.800.950.901.000.991.090.931.131.121.09
Chol,HDL-4ME4839590.970.960.870.940.900.961.011.131.021.111.081.07
Apo-A1,HDL-4ME4839711.010.970.920.960.920.971.011.101.001.091.051.04
Apo-A2,HDL-4ME4839750.990.970.880.940.940.971.001.121.001.101.061.05
Phos,HDL-4ME4839670.990.970.900.940.920.951.021.130.981.091.091.03
Apo-B,IDLME4839001.111.061.000.901.061.061.040.940.881.030.940.96
IDLParticleNumberME4838731.111.061.000.901.061.061.040.940.881.030.940.96
Chol,IDLME4838861.141.020.950.970.971.081.031.000.821.070.901.01
FreeChol,IDLME4838901.131.020.950.970.961.051.061.020.811.090.921.00
Apo-A2,HDL-2ME4839731.071.050.841.011.071.071.000.930.841.061.051.00
FreeChol,HDL-1ME4839601.050.990.871.000.931.071.030.940.941.110.981.10
Apo-A2,HDL-1ME4839721.071.070.901.051.031.100.990.860.851.080.971.00
Apo-A1,HDL-1ME4839681.051.040.961.050.971.101.000.840.931.070.951.02
Chol,HDL-1ME4839561.011.010.891.020.981.111.030.870.941.100.971.07
Phos,HDL-1ME4839641.021.030.921.030.991.101.020.870.911.080.991.02
TG,HDL-1ME4839521.061.061.131.071.021.091.000.830.901.040.910.85
TG,HDL-2ME4839531.141.061.151.091.041.031.000.850.870.940.950.85
TG,HDLME4838841.081.031.121.040.991.011.000.940.901.020.960.87
TG,HDL-3ME4839541.121.041.101.031.030.991.000.930.900.971.010.85
Chol,VLDL-5ME4839110.921.021.250.970.870.841.141.120.920.891.150.91
Phos,VLDL-5ME4839211.041.001.201.000.890.881.141.090.840.891.090.93
TG,HDL-4ME4839551.060.971.100.970.920.941.031.090.971.041.000.91
TG,VLDL-5ME4839061.001.011.070.981.000.951.091.000.930.941.070.96
Phos,VLDL-1ME4839171.330.950.910.950.951.001.261.040.701.130.800.90
Chol,VLDL-1ME4839071.241.000.920.961.051.061.251.030.671.150.740.86
TG,VLDL-1ME4839021.270.990.890.971.031.021.321.000.721.150.690.88
FreeChol,VLDL-1ME4839121.370.900.820.960.890.941.321.030.661.270.870.87
TG,IDLME4838821.410.890.891.000.810.971.201.110.651.230.890.90
FreeChol,VLDL-3ME4839141.320.881.010.970.830.921.081.200.621.270.901.00
Chol,VLDL-2ME4839081.430.891.030.980.850.990.961.180.701.160.830.99
FreeChol,VLDL-2ME4839131.390.871.011.000.850.971.051.170.691.180.800.99
Chol,VLDL-3ME4839091.330.891.030.990.810.941.001.230.651.130.961.03
Phos,VLDL-3ME4839191.380.891.051.010.820.931.011.190.691.100.871.05
TG,VLDL-3ME4839041.390.801.051.000.700.881.021.260.751.150.891.10
Phos,VLDL-2ME4839181.510.841.030.990.770.940.941.220.681.120.931.01
TG,VLDL-2ME4839031.540.781.010.960.681.010.961.240.681.150.931.03
Phos,IDLME4838941.240.940.851.000.871.031.041.180.781.130.891.04
FreeChol,VLDL-4ME4839151.140.981.050.910.920.941.041.100.691.161.090.99
TGME4838621.200.960.990.960.950.991.151.050.811.110.870.94
TG,VLDLME4838811.290.930.960.970.930.981.151.090.751.130.820.96
FreeChol,VLDLME4838891.210.951.030.970.910.981.101.120.771.090.880.96
Chol,VLDLME4838851.260.951.020.970.900.981.081.130.721.100.880.99
Phos,VLDLME4838931.260.941.030.990.930.981.091.110.751.060.860.97
TG,VLDL-4ME4839051.160.911.090.980.840.901.051.160.831.041.001.06
Apo-B,VLDLME4838991.170.961.100.980.940.941.071.080.841.040.910.95
VLDLParticleNumber,VLDLParticleNumberME4838721.170.961.100.980.940.941.071.080.841.040.910.95
Chol,VLDL-4ME4839101.161.001.110.950.930.970.991.120.761.020.971.01
Phos,VLDL-4ME4839201.160.971.110.970.890.931.031.110.831.010.981.02

Factors:

F1Previus_COVID:No | TIME:T0
F2Previus_COVID:No | TIME:T14
F3Previus_COVID:No | TIME:T1M
F4Previus_COVID:No | TIME:T21
F5Previus_COVID:No | TIME:T28
F6Previus_COVID:No | TIME:T7
F7Previus_COVID:Yes | TIME:T0
F8Previus_COVID:Yes | TIME:T14
F9Previus_COVID:Yes | TIME:T1M
F10Previus_COVID:Yes | TIME:T21
F11Previus_COVID:Yes | TIME:T28
F12Previus_COVID:Yes | TIME:T7
Data matrix
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