Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST002237)

(Analysis AN003650)

Metabolite	Structure	F1	F2	F3	F4
2-hydroxybutanoic acid	ME540635	0.16	2.57	0.15	1.12
deoxyinosine	ME540713	NA	0.53	2.42	NA
aconitic acid	ME540666	0.27	0.30	2.87	0.49
XMP	ME540868	0.62	0.56	2.37	0.61
5,6-dihydroxyindole	ME540655	0.66	0.87	0.75	2.35
dGDP	ME540719	0.32	NA	0.90	1.78
ADP-D-glucose	ME540671	NA	NA	0.86	1.14
(S)-4-hydroxymandelonitrile +	ME540626	NA	0.51	1.15	1.35
4-hydroxyphenylpyruvic acid -	ME540652	0.80	NA	1.51	0.95
oxalacetic acid	ME540824	NA	NA	1.34	0.66
dCDP	ME540708	1.30	0.70	NA	NA
dCTP	ME540710	0.90	1.10	NA	NA
DOPEG	ME540728	1.11	0.93	NA	0.92
PRPP	ME540834	0.94	NA	NA	1.03
galactosamine / glucosamine	ME540747	1.88	0.46	1.16	0.46
IDP	ME540778	1.20	NA	0.81	0.79
L-cysteic acid	ME540787	1.12	NA	0.94	NA
methylglyoxal	ME540797	NA	1.03	1.04	0.94
orotidylic acid	ME540823	NA	1.03	0.97	1.00
glycylglycine	ME540762	NA	0.88	1.12	NA
tryptamine	ME540852	NA	0.93	1.22	0.48
2-aminobutanoate	ME540632	0.35	1.91	0.43	1.31
3-hydroxybutanoic acid	ME540643	0.37	1.87	0.30	1.46
3-aminoisobutanoate	ME540642	0.49	1.85	0.80	0.86
4-hydroxyphenylacetic acid	ME540651	0.64	2.08	0.91	0.73
D-gluconic acid -	ME540720	0.99	1.60	0.75	0.82
4-hydroxybutanoic acid	ME540650	0.61	1.61	0.63	1.16
deoxyuridine	ME540714	0.70	1.59	0.74	0.97
thymidine	ME540850	0.65	1.58	0.80	0.97
FAD	ME540740	0.90	1.11	0.99	NA
dihydroorotate	ME540721	1.02	0.87	1.05	NA
dUMP	ME540734	0.92	1.01	1.19	NA
DL-DOPA	ME540723	0.75	0.82	1.57	1.27
3-methoxytyramine	ME540646	0.44	0.77	1.66	1.13
cysteine	ME540699	0.49	0.64	1.48	1.39
anandamide	ME540678	0.42	1.03	1.82	0.77
hypoxanthine	ME540776	0.73	0.80	1.72	0.76
inosine	ME540781	0.71	0.77	1.79	0.73
dopamine / octopamine	ME540726	0.71	0.82	1.51	0.90
xanthine	ME540866	0.75	0.88	1.52	0.84
mevalonic acid	ME540799	1.00	0.63	1.65	0.96
epinephrine	ME540736	0.88	0.63	1.39	1.09
2-(Formamido)-N1-(5-phospho-D-ribosyl)acetamidine	ME540629	0.82	0.60	1.39	1.15
glutamine	ME540754	0.86	0.59	1.34	1.21
2,3-bisphospho-D-glycerate	ME540630	1.03	0.39	1.39	1.06
phosphoenolpyruvate	ME540830	1.12	0.48	1.31	1.09
2/3-phosphoglycerate	ME540631	1.19	0.73	0.94	1.15
GAP / DHAP	ME540750	1.19	0.62	0.99	1.21
D-galactosamine/glucosamine-6-phosphate	ME540718	1.43	0.60	1.06	0.92
6-phosphogluconic acid	ME540662	1.27	0.62	1.14	0.97
F6P / G1P	ME540739	1.26	0.66	1.04	1.03
deoxyguanosine	ME540712	1.20	0.84	1.60	0.63
D-galactosamine/glucosamine-1-phosphate	ME540717	1.34	0.44	1.27	0.79
methionine	ME540795	1.25	0.51	1.44	0.80
tyrosine	ME540855	1.24	0.50	1.43	0.83
L-NMMA	ME540790	1.19	0.64	1.39	0.79
fructose / mannose	ME540743	1.29	0.56	1.29	0.86
hydroxyphenyllactic acid	ME540775	1.28	0.63	1.32	0.78
N-carbamoyl-L-aspartate	ME540813	1.57	1.12	0.70	0.63
6-aminocaproic acid	ME540660	1.22	1.19	0.80	0.58
AICA ribonucleotide	ME540673	1.39	1.23	0.65	0.55
betaine	ME540684	1.34	1.29	0.64	0.72
dADP	ME540704	1.67	0.93	0.90	0.96
picolinic acid	ME540832	1.51	0.81	0.72	0.96
guanidine	ME540765	1.49	1.08	0.53	0.90
citraconic acid	ME540690	1.19	1.02	0.71	1.07
FMN	ME540741	1.27	0.85	0.59	0.91
kynurenine	ME540784	0.49	1.12	0.88	1.51
histamine	ME540770	0.82	0.87	0.74	1.57
3-ureidopropionic acid	ME540649	0.61	0.93	0.66	1.43
pantothenic acid	ME540825	0.73	1.05	0.81	1.41
levulinic acid	ME540789	0.39	1.13	1.16	1.16
homoserine / theronine	ME540773	0.75	0.84	1.05	1.36
homovanillic acid	ME540774	0.65	0.83	1.10	1.47
isonictinic acid	ME540782	0.69	1.07	1.26	0.97
6-phosphoglucono-D-lactone	ME540663	0.75	1.11	1.04	1.06
cytosine	ME540703	0.82	1.07	0.91	1.21
UTP	ME540864	0.70	1.08	1.00	1.19
leucine / leucine(iso)	ME540788	0.76	0.97	1.07	1.20
valine	ME540865	0.81	1.04	1.01	1.15
y-glutamylcysteine	ME540869	1.08	0.73	0.64	1.23
2-keto-isovaleric acid	ME540636	0.93	1.02	1.19	0.86
guanine	ME540767	0.94	1.04	1.21	0.81
guanosine	ME540768	0.94	1.05	1.22	0.79
2-aminoisobutanoate	ME540633	0.99	0.91	1.26	0.85
choline+	ME540689	0.98	0.92	1.19	0.90
N,N-dimethylaniline	ME540800	1.00	0.91	1.21	0.88
acetoacetic acid	ME540664	0.99	0.95	1.35	0.77
dAMP	ME540705	0.87	0.90	1.36	0.84
nicotinamide	ME540814	0.90	0.88	1.28	0.93
F-1,6/2,6-DP	ME540737	1.05	0.77	1.04	1.14
S-adenosyl-L-homocysteine	ME540839	1.02	0.87	1.02	1.10
serine	ME540842	0.99	0.84	1.04	1.13
3-phospho-serine	ME540648	0.97	0.88	1.16	1.00
norepinephrine	ME540819	0.88	0.89	1.15	1.08
nicotinic acid	ME540816	0.93	0.84	1.16	1.06
tryptophan	ME540853	0.90	0.86	1.17	1.07
5-aminolevulinate	ME540656	0.95	0.98	1.06	1.01
glutaminic acid	ME540755	0.98	0.95	1.03	1.04
glutathione	ME540756	0.88	0.92	1.04	1.16
NADPH	ME540812	0.92	0.94	1.07	1.10
homocysteine	ME540772	0.84	0.79	1.23	1.01
citramalic acid	ME540691	0.82	0.81	1.23	1.13
phenylalanine	ME540827	0.89	0.72	1.27	1.12
F1P	ME540738	1.01	0.64	1.34	1.00
N-acetyl-b-alanine	ME540804	1.04	0.70	1.24	1.02
asparagine	ME540680	0.94	0.79	1.23	1.05
arginine	ME540679	1.01	0.75	1.20	1.04
histidine	ME540771	0.97	0.75	1.21	1.07
L-arginino-succinate	ME540786	0.96	0.75	1.32	0.97
thiamine+	ME540849	1.02	0.79	1.24	0.96
5-methyl-THF	ME540658	0.91	1.17	0.74	1.24
allantoin	ME540676	0.95	1.20	0.76	1.09
1-methylnicotinamide+	ME540628	1.07	1.33	0.65	0.95
dCMP	ME540709	1.15	1.19	0.64	1.02
DOPAC	ME540724	1.30	0.79	1.12	0.80
a-KG	ME540674	1.16	0.92	1.13	0.78
citrulline	ME540693	1.24	0.93	1.13	0.70
CTP	ME540697	1.06	0.90	1.08	0.92
lysine	ME540791	1.11	0.86	1.11	0.92
dimethylglycine	ME540722	1.01	0.98	1.12	0.89
GABA	ME540746	1.02	0.95	1.12	0.91
DOPET	ME540729	1.12	0.96	1.08	0.83
putrescine	ME540836	1.07	0.99	1.07	0.87
imidazole-4-acetate	ME540779	1.22	0.94	0.99	0.85
N1/N8-acetylspermidine	ME540801	1.21	0.94	1.02	0.83
D-erythrose-4-phosphate	ME540715	1.21	0.95	0.95	0.87
phosphorylcholine+	ME540831	1.19	0.95	0.99	0.88
3-hydroxypropanoic acid	ME540645	1.13	0.84	1.03	0.99
octopamine	ME540820	1.14	0.82	0.98	1.04
pyruvic acid	ME540838	1.23	0.86	0.96	0.95
5-methylcytosine	ME540657	1.20	0.83	1.05	0.92
lactic acid	ME540785	1.18	0.82	1.04	0.96
agmatine	ME540672	0.92	0.82	0.97	1.26
cystathionine	ME540698	1.04	0.93	0.85	1.18
UDP	ME540856	1.03	0.91	0.92	1.13
serotonin	ME540843	0.92	0.96	0.93	1.19
2-oxobutanoic acid	ME540638	0.97	0.97	0.84	1.22
dehydroascorbic acid	ME540711	0.96	0.94	0.88	1.23
DOPAL	ME540725	0.84	1.18	0.91	1.07
Creatinine	ME540696	0.95	1.06	0.93	1.06
dopamine quinone	ME540727	0.95	1.08	0.89	1.07
GTP	ME540764	0.89	1.07	0.92	1.12
IMP	ME540780	0.90	1.07	0.95	1.07
UMP	ME540859	0.97	1.11	0.82	1.10
uric acid	ME540862	0.91	1.14	0.87	1.08
4-hydroxyproline	ME540653	1.18	0.95	0.90	0.98
CDP	ME540687	1.13	0.91	0.91	1.05
ADP	ME540670	1.08	0.94	0.94	1.04
phenethylamine	ME540826	1.08	0.92	0.99	1.01
citrate / citrate(iso)	ME540692	1.06	1.06	1.02	0.86
adenine	ME540667	1.00	1.09	1.00	0.92
D-ribose-1/5-phosphate / D-ribulose 5-phosphate	ME540730	1.01	1.04	1.04	0.91
pyridoxine	ME540837	1.14	0.96	1.00	0.92
N-acetylglucosamine 1/6-phosphate	ME540807	1.07	0.93	0.98	0.96
ATP / dGTP	ME540682	1.07	0.97	0.98	0.98
carnitine+	ME540686	1.06	0.99	0.98	0.96
acetylcholine+	ME540665	1.06	1.03	0.97	0.94
D-sedoheptulose-7-phosphate	ME540731	1.07	1.01	0.99	0.93
carbamoyl phosphate	ME540685	1.09	0.97	1.00	0.92
gulonic-lactone	ME540769	1.09	1.00	0.99	0.90
NADP+	ME540811	1.04	0.98	0.88	1.10
G6P	ME540745	1.04	1.03	0.84	1.09
N-acetylaspartylglutamic acid	ME540803	1.02	1.04	0.87	1.08
5^-methylthioadenosine	ME540659	1.03	1.04	0.96	0.97
GMP	ME540763	1.01	1.06	0.95	0.99
aspartic acid	ME540681	1.01	1.04	0.95	1.00
creatine	ME540695	1.02	1.04	0.95	0.99
glyceric acid	ME540759	0.98	1.04	0.95	1.03
N-acetylaspartic acid	ME540802	0.98	1.04	0.97	1.01
tyramine	ME540854	0.98	1.04	0.98	1.00
itaconic acid	ME540783	1.06	1.00	0.93	1.02
spermidine	ME540844	1.03	1.02	0.93	1.01
GDP	ME540751	1.00	1.01	0.94	1.06
GDP-L-fucose	ME540752	0.99	1.01	0.96	1.04
adenylosuccinate	ME540669	1.02	0.98	0.96	1.03
spermine	ME540845	1.02	1.00	0.98	1.00
NADH	ME540810	1.05	1.08	0.85	0.98
S-adenosyl-L-methionine+	ME540840	1.04	1.11	0.86	0.98
AMP / dGMP	ME540677	1.02	1.06	0.88	1.03
CMP	ME540694	1.01	1.10	0.87	1.02
UDP-N-acetyl-galactosamine/UDP-N-acetyl-glucosamine	ME540858	1.02	1.09	0.89	1.00
maleic acid	ME540792	1.08	1.02	0.93	0.97
alanine	ME540675	1.05	1.04	0.95	0.95
CDP-choline	ME540688	1.06	1.04	0.94	0.96
malic acid	ME540793	1.07	1.04	0.93	0.96
proline	ME540833	1.05	1.08	0.91	0.96
D-arabinono-1,4-lactone	ME540706	1.06	1.04	0.91	0.99
UDP-D-glucose	ME540857	1.04	1.06	0.91	0.99
mesaconic acid	ME540794	1.12	1.08	0.88	0.92
succinic acid	ME540846	1.13	1.07	0.87	0.93
glutathione disulfide	ME540757	1.09	1.04	0.89	0.98
NAD+	ME540809	1.09	1.07	0.87	0.96
taurine	ME540848	1.09	1.07	0.88	0.96
glycerol 2/3-phosphate	ME540760	1.21	1.07	0.93	0.79
GalNAC/GlcNAC/ManNAC	ME540749	1.18	1.14	0.98	0.70
N-acetyl-L-glutamic acid	ME540808	1.22	1.14	0.98	0.66
phosphocreatine	ME540829	1.09	1.16	0.95	0.80
b-alanine	ME540683	1.08	1.11	0.97	0.84
N-acetyl-DL-alanine	ME540805	1.09	1.12	0.95	0.83
3,4-dihydroxyphenylpropanoate	ME540641	1.03	1.10	0.90	0.90
adenosine	ME540668	1.07	1.17	0.87	0.90
ornithine	ME540821	1.09	1.17	0.90	0.84
nicotinamide riboside+	ME540815	1.16	1.28	0.80	0.76
phenylephrine / synephrine	ME540828	1.09	1.30	0.84	0.77
guanidinoacetate	ME540766	1.24	1.21	0.72	0.84
N-acetyl-dopamine	ME540806	1.22	1.16	0.87	0.76
NMN	ME540818	1.19	1.17	0.80	0.85
2-ketovaleric acid	ME540637	1.16	1.22	0.82	0.81
D-galactonic acid	ME540716	1.15	1.18	0.84	0.83
methylmalonic acid	ME540798	0.77	1.25	0.99	0.93
thymine	ME540851	0.75	1.28	1.00	0.97
uracil	ME540860	0.86	1.25	1.06	0.83
3-hydroxyphenylacetic acid / vanillin	ME540644	0.86	1.18	1.06	0.91
IDA	ME540777	0.87	1.20	0.96	0.94
orotic acid	ME540822	0.88	1.18	0.98	0.95
3- / 7-methylguanine	ME540639	0.89	1.27	0.90	0.95
urea	ME540861	0.91	1.27	0.82	1.01
cytidine	ME540702	1.01	1.27	0.84	0.89
pseudouridine	ME540835	0.97	1.23	0.88	0.92
uridine	ME540863	1.00	1.20	0.88	0.92
fumaric acid	ME540744	1.08	1.30	0.77	0.85
2-HG	ME540634	1.01	1.32	0.77	0.89
glycine	ME540761	0.97	1.32	0.80	0.92

Factors:

F1	Genotype:Depdc5 KO \| Treatment:Control
F2	Genotype:Depdc5 KO \| Treatment:Fasted
F3	Genotype:Depdc5 WT \| Treatment:Control
F4	Genotype:Depdc5 WT \| Treatment:Fasted

Data matrix