Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST002242)

(Analysis AN003660)

Metabolite	Structure	F1	F2	F3	F4	F5	F6
4-imidazolone-5-propanoate	ME540877	0.03	0.24	0.33	0.37	1.33	3.70
carnitine C4-OH	ME540903	0.03	0.08	0.42	0.48	0.87	4.13
deoxyuridine	ME540921	0.08	0.05	0.55	0.39	0.40	4.52
N-acetylhistidine	ME540977	0.07	0.09	0.55	0.31	0.35	4.63
lactate	ME540963	0.09	0.18	0.46	0.40	0.60	4.27
thiamine	ME541016	0.05	0.16	0.44	0.28	0.65	4.43
uric acid	ME541026	0.06	0.13	1.99	0.14	0.20	3.48
hexitol	ME540950	0.10	0.13	1.29	0.25	0.20	4.03
methionine sulfoxide	ME540969	0.04	0.08	1.34	0.11	0.20	4.23
pyroglutamate	ME541004	0.06	1.65	0.74	0.27	0.72	2.56
uridine	ME541027	0.12	1.12	0.89	0.27	0.73	2.88
anserine	ME540888	NA	0.18	0.71	NA	0.32	2.79
5-hydroxyindoleacetate	ME540878	NA	0.33	0.74	0.31	0.85	2.77
orotate	ME540990	NA	0.40	1.01	0.24	0.65	2.69
4-hydroxyproline	ME540876	0.21	0.24	0.94	0.68	0.87	3.06
histidine	ME540952	0.15	0.48	1.00	0.60	0.96	2.81
asparagine	ME540891	0.17	0.40	1.07	0.55	0.91	2.91
proline	ME541002	0.14	0.31	1.13	0.56	0.92	2.93
isoleucine	ME540961	0.19	0.58	1.33	0.39	0.74	2.77
1-methylnicotinamide	ME540871	0.13	0.56	1.35	0.29	0.75	2.91
deoxycytidine	ME540920	0.12	0.58	1.41	0.29	0.82	2.78
IMP	ME540957	0.06	0.42	1.13	0.34	1.00	3.06
ophthalmate	ME540988	0.04	0.45	1.19	0.24	0.96	3.12
argininosuccinate	ME540890	0.10	0.47	1.19	0.49	0.84	2.90
Indole-3-acrylate	ME540958	0.13	0.50	1.15	0.36	0.87	2.97
tryptophan	ME541019	0.15	0.50	1.17	0.35	0.87	2.96
pentitol	ME540994	0.17	0.48	0.95	0.35	0.78	3.26
lysine	ME540965	0.09	0.45	1.14	0.23	0.82	3.27
cytidine	ME540918	0.15	0.50	1.19	0.30	0.71	3.16
Indole-3-aldehyde	ME540959	0.12	0.41	1.21	0.28	0.82	3.15
methionine sulfone	ME540968	0.28	0.29	1.09	0.44	0.73	3.16
glycine	ME540945	0.21	0.36	1.18	0.44	0.58	3.24
pantothenate	ME540993	0.14	0.30	1.30	0.46	0.70	3.09
beta-alanine	ME540894	0.21	0.34	1.24	0.47	0.62	3.12
valine	ME541029	0.18	0.39	1.28	0.42	0.66	3.07
ATP	ME540893	0.15	0.39	1.45	0.27	0.79	2.94
carnitine	ME540896	0.10	0.40	1.49	0.27	0.77	2.96
deoxycarnitine	ME540919	0.10	0.36	1.46	0.26	0.62	3.20
N6,N6,N6-trimethyllysine	ME540973	0.10	0.37	1.50	0.24	0.57	3.23
gluconate	ME540936	0.10	0.43	1.35	0.33	0.65	3.13
4-hydroxybenzaldehyde	ME540874	0.08	0.39	1.41	0.27	0.72	3.12
tyrosine	ME541020	0.10	0.40	1.41	0.29	0.74	3.06
acetyl-CoA	ME540880	0.06	0.39	1.46	0.06	0.72	3.31
N6-methyllysine	ME540974	0.05	0.29	1.42	0.14	0.59	3.51
methionine	ME540967	0.19	0.29	1.70	0.31	0.44	3.08
N-acetylmethionine	ME540978	0.21	0.16	1.42	0.41	0.49	3.31
allantoin	ME540886	0.22	0.52	0.66	0.57	0.89	3.14
guanidinoacetate	ME540947	0.13	0.72	0.75	0.53	0.67	3.20
N3,N4-dimethylarginine	ME540972	0.08	0.65	0.98	0.24	0.99	3.06
kynurenine	ME540962	0.12	0.42	0.84	0.38	1.03	3.20
citrulline	ME540911	0.05	0.49	0.97	0.19	1.12	3.19
targinine	ME541014	0.06	0.53	0.91	0.20	0.95	3.35
4-hydroxyphenyllactate	ME540875	0.08	0.33	0.59	0.54	1.10	3.36
betaine	ME540895	0.06	0.53	0.60	0.31	1.24	3.26
oxidized glutathione	ME540991	0.03	0.71	0.51	0.20	1.14	3.40
erythritol	ME540927	0.11	NA	0.56	0.32	0.59	3.20
creatinine	ME540915	0.20	0.13	0.86	0.46	0.48	3.86
phenylacetylglycine	ME540996	0.25	0.14	0.63	0.72	0.56	3.71
ornithine	ME540989	0.10	0.20	1.23	0.32	0.77	3.38
N-formylmethionine	ME540985	0.11	0.30	0.88	0.36	0.89	3.46
N-acetylserine	ME540980	0.10	0.34	1.06	0.33	0.61	3.56
carnosine	ME540905	0.08	0.34	1.01	0.52	0.68	3.37
carnitine C3	ME540900	0.10	0.18	0.97	0.45	0.78	3.52
threonine	ME541018	0.12	0.24	1.05	0.42	0.73	3.45
methylhistidine	ME540970	0.16	0.34	0.87	0.25	0.68	3.71
carnitine C2	ME540899	0.08	0.25	0.71	0.40	0.89	3.68
pseudouridine	ME541003	0.13	0.21	0.74	0.50	0.79	3.62
guanosine	ME540949	0.02	2.05	1.27	0.01	0.87	1.77
succinate	ME541013	NA	0.77	1.07	NA	0.75	1.40
N-acetylglutamine	ME540976	0.13	1.15	1.89	0.19	0.98	1.67
pentose phosphate	ME540995	0.14	1.05	1.80	0.35	1.24	1.41
UDP-glucuronate	ME541023	0.19	1.44	1.70	0.23	0.62	1.82
GDP-fucose	ME540935	0.17	1.60	1.89	0.17	0.86	1.32
phosphoethanolamine	ME541000	0.09	1.35	2.20	0.14	0.61	1.61
S-adenosylmethionine	ME541008	0.35	1.04	1.13	0.66	1.40	1.41
aspartate	ME540892	0.16	1.25	1.36	0.44	1.21	1.58
glucosamine 6-phosphate	ME540937	0.22	1.32	1.24	0.51	1.09	1.62
UDP-GlcNAc	ME541022	0.07	1.43	1.37	0.15	1.23	1.75
N2-gamma-glutamylglutamine	ME540971	0.08	1.40	1.39	0.21	0.96	1.95
glycerol 2-phosphate	ME540942	0.18	1.43	1.44	0.31	0.90	1.75
glycerophosphocholine	ME540944	0.11	1.59	1.42	0.24	0.98	1.67
xanthine	ME541030	0.27	1.03	1.29	0.55	0.87	1.98
creatine	ME540914	0.17	0.84	1.33	0.43	1.08	2.16
leucine	ME540964	0.19	0.95	1.32	0.33	0.83	2.38
carnitine C3-DC	ME540901	0.20	1.11	1.13	0.25	1.24	2.07
nicotinamide riboside	ME540987	0.19	0.87	1.62	0.22	1.08	2.03
CMP-N-Acetylneuraminate	ME540913	0.17	0.99	1.55	0.36	1.05	1.89
GDP	ME540934	0.23	1.05	1.35	0.33	1.05	1.99
CMP	ME540912	0.12	1.18	1.47	0.21	1.12	1.89
UDP	ME541021	0.15	1.02	1.39	0.25	1.31	1.88
citrate	ME540910	0.12	0.46	0.43	0.25	2.48	2.25
aconitate	ME540881	0.11	0.43	0.65	0.27	1.80	2.74
NADH	ME540982	0.05	NA	0.55	0.19	1.41	2.79
2-oxoglutarate	ME540873	0.08	1.30	0.77	0.15	1.95	1.75
gamma-glutamylcysteine	ME540931	0.11	1.00	0.77	0.30	2.03	1.79
NADPH	ME540984	NA	0.45	0.86	0.05	1.87	1.77
1-methyladenosine	ME540870	0.13	0.88	1.06	0.25	1.77	1.91
glycerol 3-phosphate	ME540943	0.05	0.73	0.95	0.19	1.88	2.20
S-adenosylhomocysteine	ME541007	0.08	1.06	0.99	0.19	1.42	2.26
cysteinylglycine	ME540917	0.04	1.07	0.78	0.26	1.58	2.27
glutathione reduced	ME540940	0.05	1.07	0.83	0.27	1.55	2.22
homoarginine	ME540953	0.08	0.77	0.82	0.32	1.34	2.67
gamma-glutamylglutamate	ME540932	0.04	1.15	0.75	0.18	1.31	2.57
gamma-glutamylglycine	ME540933	0.04	0.96	0.97	0.17	1.35	2.52
homocitrulline	ME540954	NA	0.68	0.76	0.22	1.00	2.35
arginine	ME540889	0.17	0.73	1.05	0.51	1.19	2.36
cinnamate	ME540908	0.17	0.63	0.83	0.57	1.38	2.41
phenylalanine	ME540997	0.21	0.64	0.80	0.59	1.39	2.36
cyclic AMP	ME540916	0.05	0.90	1.53	0.08	1.56	1.89
fumarate	ME540929	0.07	0.55	1.25	0.15	1.67	2.31
malate	ME540966	0.11	0.52	1.27	0.19	1.49	2.41
CDP-ethanolamine	ME540906	NA	0.37	1.61	0.16	0.39	2.48
S-(2-succinyl)cysteine	ME541006	NA	0.14	1.37	NA	0.23	2.26
carnitine C4	ME540902	0.17	0.23	2.45	0.21	0.21	2.74
citicoline	ME540909	0.15	0.42	1.96	0.33	0.49	2.66
hypotaurine	ME540955	0.41	0.23	2.21	0.50	0.34	2.31
alanine	ME540885	0.42	0.63	1.68	0.50	0.73	2.05
serine	ME541010	0.37	0.67	1.64	0.38	0.84	2.09
phosphocreatine	ME540998	0.17	0.61	1.73	0.33	0.65	2.52
glutamate	ME540938	0.17	0.50	1.63	0.40	0.87	2.45
taurine	ME541015	0.34	0.50	1.60	0.46	0.70	2.40
epsilon-(gamma-glutamyl)lysine	ME540926	0.19	0.52	2.18	0.22	0.60	2.29
N-acetylaspartate	ME540975	0.12	0.59	2.34	0.17	0.49	2.28
sedoheptulose 7-phosphate	ME541009	0.20	0.49	2.37	0.21	0.44	2.29
dihydroxyacetone phosphate	ME540922	0.16	0.63	2.03	0.44	0.84	1.90
carnitine C5-OH	ME540904	0.19	0.76	2.13	0.22	0.62	2.08
palmitoyl sphingomyelin	ME540992	0.13	0.82	2.07	0.14	0.83	2.01
dipalmitoylphosphatidylcholine	ME540923	0.14	NA	2.45	0.09	NA	1.32
glutamine	ME540939	0.41	0.76	2.41	0.29	0.51	1.64
UDP-glucose	ME541024	0.14	1.02	2.87	0.09	0.22	1.65
dissaccharide	ME540924	1.89	1.16	0.05	1.17	0.89	0.83
phosphorylcholine	ME541001	0.04	2.40	2.26	0.03	0.52	0.74
urocanate	ME541028	0.65	1.81	1.49	0.41	0.72	0.92
N-acetylneuraminate	ME540979	0.10	1.82	1.13	0.10	1.84	1.00
ADP	ME540883	0.10	1.88	0.82	0.16	2.11	0.93
nicotinamide mononucleotide	ME540986	0.02	2.14	0.83	0.03	1.89	1.08
hexose phosphate	ME540951	0.10	1.91	1.23	0.11	1.27	1.40
GMP	ME540946	0.08	2.13	1.15	0.07	1.53	1.04
NAD	ME540981	0.10	2.14	1.21	0.12	1.54	0.90
guanine	ME540948	0.32	1.84	0.76	0.57	1.32	1.19
hypoxanthine	ME540956	0.09	1.45	0.55	0.63	1.71	1.56
adenosine	ME540882	NA	1.83	0.18	NA	1.39	0.60
dTMP	ME540925	NA	2.17	0.31	NA	1.29	0.22
FAD	ME540928	0.02	2.34	0.58	0.03	2.37	0.66
thiamine pyrophosphate	ME541017	0.01	2.16	0.62	0.04	2.38	0.79
AMP	ME540887	0.05	2.52	0.42	0.04	2.67	0.30
pyruvate	ME541005	0.06	2.51	0.41	0.05	2.46	0.53
S-lactoylglutathione	ME541011	0.06	2.52	0.50	0.19	1.82	0.91
NADP	ME540983	0.06	2.56	0.52	0.10	2.11	0.64
ADP-ribose	ME540884	0.08	2.54	0.84	0.07	2.08	0.39
sphinganine	ME541012	0.01	2.55	0.81	0.00	2.01	0.62
phosphoenolpyruvate	ME540999	0.03	4.03	0.38	0.03	1.41	0.12
gamma-glutamylalanine	ME540930	0.05	3.51	0.75	0.08	0.63	0.97
inosine	ME540960	0.03	2.87	0.52	0.04	1.22	1.31
2/3-phosphoglycerate	ME540872	0.14	3.21	0.55	0.19	1.45	0.45
choline	ME540907	0.12	2.76	0.88	0.08	1.37	0.78
UMP	ME541025	0.07	2.90	0.96	0.08	1.37	0.62
7-methylguanine	ME540879	0.01	1.49	0.23	0.05	3.45	0.78
glyceraldehyde 3-phosphate	ME540941	NA	0.66	0.61	NA	1.59	1.14
carnitine C16	ME540897	NA	0.96	0.24	NA	2.09	0.71
carnitine C18	ME540898	NA	1.05	0.20	NA	2.05	0.70

Factors:

F1	Treatment:hypoxia \| Cellular fraction:cytosolic
F2	Treatment:hypoxia \| Cellular fraction:mitochondrial
F3	Treatment:hypoxia \| Cellular fraction:whole cell
F4	Treatment:normoxia \| Cellular fraction:cytosolic
F5	Treatment:normoxia \| Cellular fraction:mitochondrial
F6	Treatment:normoxia \| Cellular fraction:whole cell

Data matrix