Data for Comparative metabolomics analysis of the key metabolic nodes in propionic acid synthesis in Propionibacterium acidipropionici (Study ST000116)

(Analysis AN000197)

Values for each metabolite have been scaled by dividing by the mean across all factors

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MetaboliteF1F2F3
1-Aminocyclopropane-1-carboxylate 0.5078 1.7907 0.7016
2,6-Diaminoheptanedioate 0.7315 1.5843 0.6843
2-Aminomuconate 0.8938 0.9204 1.1858
2-Aminophenol 1.1991 0.8407 0.9602
2-Deoxy-ribose 0.8962 0.8181 1.2857
2-Oxoadipate 1.1554 0.2653 1.5793
2-Oxobutanoate 0.6926 1.0006 1.3068
2-Oxoglutarate 1.1574 0.5926 1.2500
3-Phospho-glycerate 1.7339 0.4766 0.7895
3-Phospho-glyceroyl phosphate 0.7301 1.4681 0.8018
4-Aminobutyraldehyde 1.0553 0.6170 1.3277
4-Hydroxybenzoate 0.9307 1.6330 0.4363
5,6-Dihydrouracil 1.0927 0.7510 1.1563
5-Aminoimidazole 1.4656 0.4686 1.0657
5-Hydroxy-tryptophan 0.1922 1.0764 1.7314
5^-Methylthioadenosine 0.8475 0.7518 1.4007
5-Phosphoribosylamine 1.2191 0.7354 1.0455
6-Phospho-gluconate 0.9115 0.6346 1.4539
7,8-Diaminononanoate 0.0438 1.1623 1.7940
Acetate 0.9820 0.5817 1.4363
Acetyl phosphate 0.8243 1.0974 1.0783
Acrylamide 0.5556 0.9644 1.4800
Acrylate 1.0551 0.5453 1.3996
Acrylonitrile 0.9577 0.7733 1.2690
Adenine 2.9032 0.0339 0.0629
Adenosine 1.0581 0.8071 1.1349
Adenylylselenate 1.0121 0.5044 1.4835
ADP 1.0767 0.7340 1.1893
Agmatine 0.7282 0.6731 1.5987
Alanine 0.5196 0.6903 1.7901
Aminoacetone 1.1081 0.4248 1.4672
AMP 1.5102 0.2706 1.2192
Anthranilate 0.9503 0.3991 1.6506
Arginine 2.4742 0.5053 0.0205
Arogenate 1.0411 0.5057 1.4531
Aspartate 1.2502 1.6403 0.1095
ATP 1.6561 0.3455 0.9984
Barbiturate 1.3787 0.6255 0.9957
Benzoate 1.1058 0.6195 1.2747
beta-Alanyl arginine 1.2063 0.6848 1.1089
Biotin 0.6181 0.7361 1.6458
Carnitine 1.2458 0.5546 1.1996
Catechol 0.8389 0.7141 1.4470
CDP 1.4087 0.6151 0.9762
CDP-glucose 1.2835 0.8139 0.9026
Chitobiose 1.1640 0.9707 0.8653
Choline 1.0013 1.0390 0.9597
Chorismate 1.5349 0.5313 0.9338
Citrate 0.9695 0.8269 1.2036
Citrulline 1.4738 1.2906 0.2356
CMP 1.9854 0.2114 0.8032
CTP 0.9024 0.7656 1.3320
Cystathionine 0.7072 0.9462 1.3465
Cysteine 1.4515 0.5963 0.9522
Cytidine 0.9934 0.9773 1.0292
Cytosine 0.8703 0.6751 1.4546
dADP 1.2289 0.6418 1.1293
dATP 1.0305 0.7475 1.2220
dCDP 1.2745 0.5265 1.1989
Deoxyadenosine 0.9139 0.3876 1.6986
Deoxycytidine 1.2287 0.5162 1.2551
dIDP 2.0090 0.3640 0.6270
Dihydroorotate 1.1653 0.6473 1.1874
dTMP 1.7192 0.6654 0.6155
dUMP 1.0592 1.3801 0.5607
Erythrose 4-Phosphate 1.0525 1.1237 0.8237
FAD 1.1664 1.0478 0.7858
FMN 1.1797 0.5524 1.2679
Fructose 1,6-bisphosphate 0.0845 2.5443 0.3712
Fructose 6-phosphate 1.2842 1.2447 0.4711
Fumarate 0.8033 0.7876 1.4091
GABA 0.3242 2.3997 0.2762
Geranylgeranyl diphosphate 0.9309 0.7524 1.3167
Glucarate 1.0866 0.5953 1.3181
Gluconate 1.2029 0.6490 1.1482
Glucosamine 1.1678 0.5504 1.2817
Glucosamine 6-phosphate 0.9832 0.6317 1.3852
Glucose 0.9765 1.0260 0.9975
Glucuronate 1.0212 0.7196 1.2592
Glutamate 0.7082 1.7639 0.5279
Glutathione 1.4506 0.4766 1.0727
Glycerol 2.0981 0.1183 0.7836
Glycerone 0.3836 2.3596 0.2569
Glycerone phosphate 1.1066 1.1066 0.7869
Glycine 1.3500 0.6360 1.0140
Glycolate 0.5579 1.2386 1.2035
Glyoxylate 1.0361 1.0621 0.9018
GMP 0.9134 0.5942 1.4924
Guanine 1.1722 0.6808 1.1470
Guanosine 0.8791 0.5755 1.5453
Histidine 1.1119 0.4701 1.4179
Homocysteine 0.9765 0.8882 1.1353
Hypoxanthine 1.6342 0.2899 1.0760
IDP 1.2776 0.6397 1.0827
IMP 0.9966 0.6026 1.4007
Inosine 0.8505 0.7062 1.4433
Isopentenyl diphosphate 1.1189 0.4940 1.3871
Lactate 1.0962 0.7354 1.1684
Leucine 1.1761 1.0258 0.7981
Lipoate 0.8808 0.1045 2.0147
Malate 0.8788 1.0152 1.1061
Mannitol 0.8755 0.6445 1.4800
Mannitol 1-Phosphate 1.1992 0.4869 1.3139
Methionine 0.9273 0.7286 1.3442
Mevalonate 1.0943 0.1260 1.7797
N-Acetyl-glucosamine 1.0487 0.5993 1.3520
N-Acetyl-glutamate 0.9596 0.5625 1.4779
Nicotinamide 0.9608 0.6609 1.3783
Nicotinamide ribonucleotide 0.9079 0.9253 1.1668
O-Phospho-homoserine 1.0459 0.2798 1.6743
O-Phospho serine 1.2308 1.0611 0.7081
Orotate 0.9296 0.9126 1.1578
Pantetheine 4^-phosphate 1.0916 0.5067 1.4017
Phenylacetaldehyde 0.8089 0.0869 2.1042
Phenylalanine 0.9771 0.9539 1.0689
Phenylpyruvate 1.0021 0.3784 1.6195
Phosphoenolpyruvate 1.2432 0.6576 1.0993
Proline 1.2426 1.4734 0.2840
Propionyl-CoA 1.2433 0.7360 1.0207
Pyruvate 0.8940 0.8524 1.2536
Raffinose 0.4693 1.5343 0.9964
Riboflavin 1.3344 0.6371 1.0284
Ribose 1.0112 0.5682 1.4205
Ribose 5-phosphate 0.8429 1.3985 0.7586
S-Adenosyl-homocysteine 0.9145 0.6106 1.4749
S-Adenosyl-methionine 0.9030 1.1654 0.9316
Sedoheptulose 1,7-bisphosphate 0.7260 0.3865 1.8875
Serine 1.1880 1.3081 0.5039
sn-Glycerol 3-phosphate 1.0967 1.1431 0.7601
Succinate 1.1725 0.3235 1.5040
Tetrahydrofolate 1.6502 0.2520 1.0977
Thiamin diphosphate 0.9338 0.4829 1.5833
Threonine 1.0268 0.9219 1.0513
Thymidine 1.0238 1.5627 0.4135
Thymine 0.8898 0.5911 1.5191
Tryptophan 0.9668 1.6195 0.4137
Tyrosine 1.1060 0.6258 1.2682
UDP 0.9439 0.9697 1.0863
UMP 0.7057 0.5365 1.7578
Valine 0.7039 0.6589 1.6372
XMP 0.6753 1.2859 1.0389
Xylitol 1.0230 0.7874 1.1897
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Factors:

F1Growth phase:Late exponential phase
F2Growth phase:Middle exponential phase
F3Growth phase:Stationary phase
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