Data for Arabidopsis Nit1 knockout metabolomics (Study ST001062)
(Analysis AN001737)Values for each metabolite have been scaled by dividing by the mean across all factors Run Hierarchial cluster analysis on this study | Run Heatmap cluster analysis on this studyMetabolite | F1 | F2 | F3 | F4 | F5 | F6 |
---|---|---|---|---|---|---|
1,4-Butynediol | 0.8735 | 0.4718 | 2.5587 | 0.6077 | 0.5914 | 1.3293 |
1,4-Cyclohexanedicarboxylic acid | 0.7740 | 0.9582 | 1.6215 | 0.8807 | 0.6030 | 1.4502 |
2,4-Dibromophenol | 0.8513 | 0.7169 | 1.2410 | 0.8296 | 0.7996 | 1.8274 |
2^-Deoxycytidine | 1.7759 | 0.2724 | 0.1509 | 2.0133 | 0.1649 | 0.1318 |
2-Deoxyribose | 1.8954 | 0.9721 | 0.0534 | 0.9389 | 0.5053 | 0.9396 |
(2E,4E)-Hexa-2,4-dienoic acid | 1.3985 | 1.0769 | 0.3429 | 1.1364 | 1.3084 | 0.2911 |
2-Hydroxy-4-methylpentanoic acid | 0.7667 | 1.7446 | 1.0498 | 0.7911 | 0.8673 | 1.1488 |
2-Hydroxybenzaldehyde | 0.8924 | 1.0256 | 1.3759 | 1.0182 | 0.7163 | 1.0460 |
2-Hydroxynicotinic acid | 0.1865 | 0.1304 | 3.0293 | 0.1722 | 0.0956 | 3.7538 |
2-Hydroxyphenylacetic acid | 1.4845 | 1.7722 | 0.1841 | 1.3700 | 0.3028 | 0.1744 |
2-Keto-3-deoxyoctonic acid | 1.0692 | 1.0824 | 1.4364 | 0.6734 | 0.7561 | 1.1970 |
2-Ketogluconic acid | 1.1156 | 0.8670 | 1.2496 | 1.0512 | 0.5720 | 1.0055 |
2-Ketoglutaric Acid | 0.2432 | 0.3033 | 3.1447 | 0.2489 | 0.1233 | 3.1932 |
(2-oxo-2,3-dihydro-1H-indol-3-yl)acetic acid | 0.5911 | 0.4699 | 2.4267 | 0.6515 | 0.4417 | 2.0502 |
3-Hydroxy-3-methylglutaric acid | 0.7792 | 2.4274 | 0.8669 | 0.9284 | 0.4134 | 0.8284 |
3-Hydroxyanthranilic acid | 1.4261 | 1.4793 | 0.3235 | 1.1594 | 0.7825 | 0.3412 |
3-Hydroxybutyric acid | 1.3150 | 0.7163 | 1.1329 | 0.8831 | 0.6210 | 1.1667 |
3-Hydroxyglutaric acid | 0.9795 | 0.8880 | 1.3150 | 0.9173 | 0.6364 | 1.3497 |
3-Indoleacetonitrile | 0.1834 | 0.1211 | 4.3355 | 0.1934 | 0.1094 | 2.4099 |
3-Methyladipic acid | 0.6921 | 0.5347 | 2.0190 | 0.6443 | 0.3147 | 2.3484 |
3-Phosphoglyceric acid | 2.0038 | 0.3813 | 0.1305 | 1.3445 | 0.8602 | 0.1559 |
3-Phosphonopropionic acid | 0.6803 | 0.2771 | 2.1192 | 0.6864 | 0.7825 | 1.9823 |
4-Methylthiobutyl glucosinolate | 0.8935 | 0.7899 | 1.2204 | 1.0189 | 0.7453 | 1.4049 |
4-Pyridoxic acid | 0.8645 | 0.8040 | 1.2483 | 1.0359 | 0.8602 | 1.2702 |
5-Aminosalicylic acid | 1.4641 | 1.3674 | 0.4470 | 1.3003 | 0.1780 | 0.6064 |
5-Hydroxy-3-indoleacetic acid | 0.0840 | 0.0546 | 3.6850 | 0.0718 | 0.0508 | 3.5905 |
5-Hydroxymethyluridine | 0.6429 | 0.2617 | 1.8929 | 0.8833 | 0.5666 | 2.1474 |
5-Hydroxytryptophan | 1.0018 | 1.3138 | 0.7737 | 1.0978 | 1.0858 | 0.6441 |
6-Methylmercaptopurine | 0.3556 | 0.4994 | 2.7147 | 0.5394 | 0.5427 | 2.2690 |
Acetylenedicarboxylic acid | 0.9737 | 0.8155 | 1.3424 | 1.0778 | 0.6528 | 1.0949 |
Aconitic acid | 0.4664 | 0.6968 | 3.3459 | 0.3212 | 0.3728 | 1.8072 |
Adenine | 1.3547 | 0.8479 | 0.5425 | 1.3766 | 0.7639 | 0.5050 |
Alanine | 0.7659 | 1.1082 | 1.5564 | 0.5851 | 0.8820 | 1.6432 |
Ala-Val | 1.3138 | 0.5880 | 1.3404 | 0.8413 | 0.6668 | 1.1205 |
Allantoic acid | 1.0806 | 0.9940 | 0.5364 | 1.2324 | 1.1743 | 0.7214 |
Allantoin | 0.9708 | 1.0972 | 0.2510 | 1.1565 | 2.1276 | 0.2908 |
alpha-Hydroxyhippuric acid | 1.2914 | 1.4228 | 0.0020 | 1.3214 | 1.4474 | 0.0043 |
Aminosalicylic acid | 1.4443 | 0.8079 | 0.3812 | 1.2442 | 1.1651 | 0.3836 |
Arabitol | 0.8000 | 0.8937 | 1.0187 | 0.8588 | 0.9925 | 1.7207 |
Arbutin | 0.6061 | 0.6531 | 3.3053 | 0.6536 | 0.6490 | 0.7499 |
Arginine | 0.9280 | 1.3907 | 0.1514 | 1.1868 | 2.0860 | 0.1615 |
Ascorbic acid | 0.9112 | 0.6688 | 1.4949 | 0.8789 | 0.7770 | 1.4440 |
Benzene-1,2,4-triol | 0.9865 | 0.8461 | 1.0196 | 0.9852 | 0.8337 | 1.3524 |
beta-Cyano-alanine | 0.8148 | 0.7502 | 1.6402 | 0.8241 | 0.5836 | 1.6879 |
.beta.-D-Glucopyranose, 1,6-anhydro- | 1.1975 | 0.7182 | 0.7901 | 1.4637 | 0.6457 | 0.6339 |
beta-Hydroxyisovaleric acid | 1.0101 | 0.9576 | 0.7971 | 1.1388 | 0.9693 | 1.0030 |
beta-Nicotinamide adenine dinucleotide | 1.4296 | 1.2694 | 0.0400 | 1.2740 | 1.3618 | 0.0388 |
Catechol | 1.1249 | 0.6851 | 1.3053 | 1.0945 | 0.3965 | 1.2110 |
Cinnamic acid | 0.1825 | 0.1136 | 2.9287 | 0.1317 | 0.1348 | 3.9137 |
Citraconic acid | 1.7081 | 0.5360 | 0.4601 | 1.3937 | 0.4294 | 0.5545 |
Citramalic acid | 1.0266 | 1.3712 | 0.9046 | 1.0201 | 0.8708 | 0.7678 |
Citric acid | 0.2705 | 0.2513 | 3.8238 | 0.1993 | 0.1998 | 2.5303 |
Citrulline | 0.8597 | 0.6321 | 1.5101 | 0.8866 | 0.9501 | 1.3727 |
Coniferylaldehyde | 0.6147 | 0.3539 | 2.5555 | 0.5335 | 0.3916 | 2.2606 |
Cyclic adenosine diphosphate ribose | 1.2111 | 1.2549 | 0.0612 | 0.9258 | 1.3113 | 1.1216 |
Cysteic Acid | 0.9514 | 0.8204 | 1.3131 | 0.8860 | 0.8862 | 1.2784 |
Cystine | 1.1329 | 1.2426 | 0.1810 | 1.1758 | 1.7315 | 0.2789 |
Dehydroascorbic acid | 0.7510 | 0.4363 | 2.2596 | 0.5787 | 0.3864 | 2.1466 |
D-(+)-Galacturonic acid | 0.8458 | 1.1575 | 0.4974 | 1.1003 | 2.0149 | 0.4288 |
D-Gluconic acid | 1.0329 | 1.8079 | 0.3891 | 1.0044 | 1.3604 | 0.3742 |
D-(+)-Glyceric acid | 1.3048 | 1.1747 | 0.3778 | 1.4904 | 0.5291 | 0.4604 |
Dihydro-4,4-dimethyl-2,3-furandione | 1.0482 | 0.7894 | 1.2839 | 0.9239 | 0.6056 | 1.3722 |
Dihydrocoumarin | 0.7903 | 0.5645 | 2.1970 | 0.6262 | 0.5126 | 1.7956 |
Dihydroorotic acid | 0.3347 | 0.1597 | 2.9251 | 0.1597 | 0.2882 | 3.3872 |
Dihydroxyacetone phosphate | 0.8377 | 0.4788 | 1.5528 | 1.1910 | 0.5103 | 1.4056 |
D-(+)-Malic acid | 0.9515 | 1.2017 | 1.2894 | 0.7947 | 0.6281 | 1.3459 |
D-(-)-Mannitol | 0.8480 | 1.0054 | 0.9832 | 0.8498 | 1.5907 | 0.9746 |
D-Mannose 6-phosphate | 1.5762 | 0.5116 | 0.0083 | 1.7233 | 1.0542 | 0.0435 |
D-(+)-Trehalose | 0.8099 | 0.6250 | 2.0199 | 0.5673 | 0.8186 | 1.6783 |
Ferulic acid | 0.7685 | 1.0836 | 1.5133 | 0.5521 | 1.1064 | 1.5424 |
Fructose-1-phosphate | 0.9911 | 0.4952 | 1.1975 | 1.0260 | 0.7712 | 1.5048 |
Fumaric acid | 0.7535 | 0.3845 | 2.0462 | 0.7447 | 0.4366 | 2.0527 |
Galactinol | 0.8195 | 1.8844 | 0.8121 | 0.6176 | 1.2895 | 1.0459 |
Galactonic acid | 1.0925 | 1.0988 | 0.8408 | 1.0434 | 1.0074 | 0.8039 |
Galactose | 0.9073 | 0.7625 | 1.5831 | 0.8406 | 0.6753 | 1.4411 |
.gamma.-Glu-Cys | 0.5304 | 0.1598 | 2.6125 | 0.5813 | 0.4540 | 2.4022 |
Geniposide | 1.5444 | 1.8490 | 0.0835 | 1.2031 | 0.5836 | 0.1134 |
Glucoraphanin | 0.7480 | 0.7876 | 1.9977 | 0.5178 | 0.5544 | 2.0064 |
Glucose-6-phosphate | 0.9667 | 0.5827 | 0.8466 | 0.9673 | 0.7823 | 1.9094 |
Glucuronic acid | 1.0538 | 1.0607 | 0.8202 | 1.0912 | 0.7223 | 1.1310 |
Glu-Gln | 0.9227 | 1.9157 | 0.1996 | 1.0643 | 1.7119 | 0.1966 |
Glutamic acid | 0.8418 | 0.7266 | 1.6567 | 0.7757 | 0.7115 | 1.6064 |
Glutamine | 0.8828 | 1.0485 | 1.1517 | 0.8885 | 1.1340 | 1.0852 |
Glutathione (oxidized) | 1.4480 | 1.3985 | 0.1730 | 1.1022 | 1.0841 | 0.3358 |
Glutathione (reduced) | 0.4407 | 0.1167 | 2.1859 | 0.5854 | 0.5537 | 2.9292 |
Glyceraldehyde | 1.1762 | 0.9236 | 0.4060 | 1.6704 | 0.6803 | 0.4381 |
Glycolic acid | 0.9122 | 2.9937 | 0.5911 | 0.5840 | 0.6817 | 0.6571 |
Guanine | 1.7531 | 0.1836 | 0.2418 | 1.8805 | 0.3201 | 0.2596 |
Guanosine | 0.8232 | 0.6886 | 1.4988 | 0.8054 | 0.9751 | 1.5184 |
Guanosine-3^,5^-cyclic monophosphate | 1.4216 | 0.4578 | 0.8494 | 1.3156 | 0.4333 | 0.9080 |
Guanosine-5^-monophosphate | 1.3222 | 1.3201 | 0.1577 | 1.0899 | 1.2523 | 0.5143 |
Gulonolactone | 1.1995 | 0.7356 | 1.1255 | 0.9596 | 0.6042 | 1.2430 |
Histidine | 0.8425 | 1.1198 | 0.1960 | 0.9138 | 2.9175 | 0.2134 |
Homoarginine | 0.8003 | 1.3200 | 0.9357 | 0.8190 | 1.5533 | 0.8888 |
Homoserine | 0.6887 | 1.0231 | 1.6089 | 0.7404 | 0.7459 | 1.6688 |
Homovanillic acid | 0.7750 | 0.4260 | 2.1396 | 0.7706 | 0.3961 | 1.8714 |
Hypoxanthine | 1.3878 | 0.6739 | 0.6856 | 1.0966 | 0.7436 | 1.0088 |
Inosine | 0.8877 | 1.1507 | 0.8041 | 0.9044 | 0.9420 | 1.4843 |
Inositol | 0.9013 | 0.4959 | 1.8046 | 0.6837 | 0.4460 | 2.0144 |
Isocitric acid | 1.3649 | 0.6751 | 0.8738 | 0.7654 | 0.9555 | 1.2569 |
Isoleucine | 0.8797 | 1.0904 | 1.0175 | 0.9732 | 1.0353 | 1.1265 |
Isomaltose B | 0.9100 | 0.7639 | 1.2588 | 0.8595 | 1.1005 | 1.2993 |
Kaempferol-3-O-beta-glucopyranosyl-7-O-alpha-rhamnopyranoside | 1.0585 | 0.3763 | 1.5595 | 1.1951 | 0.2663 | 1.3330 |
Kynurenic acid | 0.7853 | 0.5873 | 1.8145 | 0.7631 | 0.7022 | 1.7240 |
Lactitol | 0.7464 | 1.3105 | 1.0633 | 0.9115 | 1.1810 | 1.0723 |
Lactobionic acid | 1.0669 | 1.9371 | 0.4870 | 0.9273 | 1.0661 | 0.5206 |
Lactose B | 0.9041 | 0.8376 | 1.2653 | 1.0332 | 0.8425 | 1.1695 |
Laricitrin | 1.3544 | 0.4373 | 2.0559 | 0.6858 | 0.6694 | 0.7636 |
L-.gamma.-Glutamyl-L-glutamic Acid | 0.3638 | 1.0042 | 0.6743 | 0.5369 | 2.2786 | 2.0585 |
Linoleic acid | 0.4970 | 0.4497 | 3.3546 | 0.3861 | 0.3305 | 1.9129 |
Lipoic acid | 0.9078 | 0.3387 | 1.2345 | 0.6831 | 0.4754 | 2.7014 |
L-N.gamma.-Monomethylarginine | 0.8851 | 1.4195 | 0.2126 | 1.1170 | 2.1798 | 0.1843 |
Lysine | 0.6083 | 1.1797 | 0.7205 | 0.8097 | 2.4046 | 0.7623 |
Maleic acid | 0.5369 | 0.3868 | 2.8094 | 0.6289 | 0.3399 | 1.9932 |
Malic acid | 1.0864 | 0.4833 | 1.2741 | 1.1258 | 0.5977 | 1.2557 |
Malonic acid | 1.2219 | 1.1690 | 0.7709 | 1.0463 | 0.7401 | 0.8282 |
Maltotriose | 0.7216 | 0.9235 | 1.8876 | 0.7792 | 0.5076 | 1.5966 |
Melezitose | 0.7361 | 1.2952 | 1.4298 | 0.8376 | 1.3604 | 0.6960 |
Methioninesulfoxide | 0.8726 | 0.8565 | 1.3759 | 0.8590 | 0.8835 | 1.3761 |
Methyl-4-hydroxy-3-methoxybenzoate | 0.1618 | 0.2036 | 4.0404 | 0.1771 | 0.1859 | 2.6157 |
Methylacetate | 0.7191 | 0.8745 | 1.8749 | 0.7039 | 0.3291 | 1.9793 |
Methyl-beta-galactopyranoside | 1.0890 | 0.5401 | 0.9831 | 1.1732 | 1.0128 | 0.9830 |
Mucic acid | 1.3257 | 0.8489 | 0.0785 | 1.2187 | 1.9959 | 0.0785 |
N-Acetylaspartic acid | 1.4135 | 1.3566 | 0.1702 | 1.2062 | 1.1871 | 0.1501 |
N-Acetylglutamic acid | 0.6897 | 0.9753 | 1.4735 | 0.8681 | 1.0493 | 1.3124 |
N-Acetylglycine | 1.1791 | 1.0492 | 0.6298 | 1.3112 | 0.9340 | 0.4880 |
N-Acetylleucine | 0.3583 | 0.2860 | 3.0272 | 0.3569 | 0.2418 | 2.8003 |
N-Acetylmannosamine | 0.7497 | 0.9281 | 1.5528 | 0.9063 | 0.6409 | 1.5089 |
N-Acetylneuraminic acid | 1.3465 | 1.1208 | 0.4705 | 1.3344 | 0.5812 | 0.5792 |
N-Acetylserine | 0.8990 | 0.9342 | 1.5590 | 0.8301 | 0.8478 | 1.1557 |
N-alpha-Acetyl-L-ornithine | 1.5735 | 1.6496 | 0.3663 | 0.6573 | 1.3209 | 0.2400 |
N-epsilon-Acetyllysine | 0.8678 | 0.9055 | 1.2719 | 0.8938 | 0.9442 | 1.3156 |
N-Formyl-L-methionine | 0.8389 | 0.9122 | 1.2006 | 1.0914 | 0.7751 | 1.2397 |
N-Methylalanine | 0.8573 | 0.7471 | 1.6431 | 0.7657 | 0.6997 | 1.6011 |
N-Methylserine | 0.9589 | 1.0017 | 1.0733 | 0.9295 | 0.9376 | 1.1921 |
N,N-Dimethylarginine | 0.9345 | 1.5528 | 0.2356 | 1.0916 | 1.9527 | 0.2111 |
N,N-Dimethylglycine | 0.8070 | 1.0697 | 0.8595 | 1.0985 | 1.4501 | 0.7940 |
O-Phosphocolamine | 1.0985 | 1.3525 | 0.5720 | 1.0746 | 1.0274 | 0.7309 |
Ornithine | 0.6351 | 1.1037 | 0.1648 | 0.8830 | 3.4673 | 0.1479 |
Orotic acid | 0.8389 | 0.6813 | 2.1066 | 0.7501 | 0.4386 | 1.5271 |
Oxaloacetic acid | 0.0059 | 0.0087 | 3.8237 | 0.0052 | 0.0091 | 3.8050 |
Palmitic acid | 0.7741 | 0.6698 | 2.4095 | 0.6581 | 0.5535 | 1.4082 |
Pantothenic acid | 1.0705 | 1.1476 | 0.8376 | 1.0006 | 0.9887 | 0.8958 |
Parabanic acid | 1.6251 | 0.5489 | 1.0417 | 1.2709 | 0.3680 | 0.3986 |
Phenylacetylglutamine | 0.8726 | 1.0723 | 0.5817 | 1.0348 | 1.7365 | 0.7792 |
Phenylalanine | 0.7095 | 1.0826 | 1.2617 | 0.7604 | 1.2784 | 1.3491 |
Phenylphosphoric acid | 0.6869 | 0.5381 | 1.6024 | 0.6211 | 0.5188 | 2.6094 |
Phenylpyruvic acid | 0.2165 | 0.1647 | 4.2398 | 0.1743 | 0.1639 | 2.3818 |
Phosphoenolpyruvic acid | 1.2792 | 1.1220 | 0.0603 | 1.1270 | 1.8090 | 0.2640 |
Phosphoric acid | 1.3220 | 1.2914 | 0.0024 | 1.3997 | 1.3789 | 0.0041 |
Propionic acid | 1.5173 | 0.6715 | 0.5026 | 1.2839 | 0.8404 | 0.5167 |
Pseudouridine | 0.9312 | 1.2330 | 0.6607 | 1.1608 | 1.2839 | 0.6537 |
Pyroglutamic acid | 0.8407 | 0.7394 | 1.6481 | 0.7730 | 0.7053 | 1.6152 |
Pyruvic acid | 0.7058 | 0.7363 | 1.6034 | 0.6157 | 0.5882 | 2.3160 |
Quercetin-3-O-beta-glucopyranosyl-7-O-alpha-rhamnopyranoside | 1.8195 | 0.7925 | 0.2108 | 1.6212 | 0.2445 | 0.1110 |
rac-Glycerol 3-phosphoate | 1.2674 | 0.6710 | 0.7023 | 1.2498 | 0.8761 | 0.8026 |
Raffinose | 1.0480 | 1.3934 | 0.6086 | 0.8252 | 1.1870 | 1.0433 |
Ribitol | 0.8236 | 1.3418 | 0.2642 | 1.0661 | 2.3395 | 0.2568 |
Ribose-5-phosphate | 0.9220 | 0.4463 | 1.0420 | 0.8740 | 0.5984 | 2.2874 |
Robinin | 0.8711 | 0.5122 | 2.3167 | 0.7147 | 0.3078 | 1.6227 |
S-(1,2-DICARBOXYETHYL)GLUTATHIONE | 1.0510 | 0.7946 | 0.0248 | 1.7322 | 1.7237 | 0.0212 |
Salicylic acid | 0.7798 | 0.6161 | 2.3456 | 0.5570 | 0.2843 | 1.9700 |
Sarcosine | 1.0546 | 1.1810 | 0.5807 | 1.2846 | 1.0735 | 0.5430 |
Serine | 1.2357 | 0.3297 | 1.0890 | 1.2668 | 0.5045 | 1.1553 |
Shikimic acid | 0.6761 | 0.5976 | 1.8673 | 0.9097 | 0.5290 | 1.7655 |
Sinapic acid | 1.1203 | 0.7382 | 0.9813 | 0.8885 | 1.2282 | 1.0362 |
Sinapoyl malate | 0.8241 | 0.6180 | 1.8997 | 0.6710 | 0.5074 | 1.9005 |
Sorbitol | 0.7127 | 0.8829 | 1.7416 | 0.8527 | 0.9774 | 1.1948 |
Sorbose | 1.2595 | 1.1301 | 0.3345 | 1.5337 | 0.7541 | 0.3271 |
Succinic acid | 0.6773 | 0.8387 | 2.0177 | 0.6224 | 0.3437 | 2.0836 |
Tagatose | 1.2283 | 0.8522 | 0.5120 | 1.5078 | 0.7303 | 0.5559 |
Taurine | 1.5999 | 0.4211 | 0.1482 | 1.6297 | 0.4015 | 0.7749 |
Tryptophan | 0.7841 | 1.2177 | 1.0078 | 0.9126 | 1.2507 | 1.0798 |
UDP-xylose | 1.3624 | 1.1450 | 0.0633 | 1.2685 | 1.2296 | 0.4055 |
Uridine | 1.0533 | 0.5314 | 1.4518 | 1.1235 | 0.4325 | 1.2603 |
Uridine-5-diphosphoacetylgalactosamine | 1.4862 | 1.0898 | 0.0181 | 1.3942 | 1.2599 | 0.0181 |
Uridine diphosphate galactose | 1.7252 | 0.7161 | 0.0051 | 1.4317 | 1.1526 | 0.0051 |
Vaccenic acid | 0.9017 | 0.9280 | 1.7256 | 0.7614 | 0.8223 | 1.1417 |
Willardiine | 0.6400 | 1.3098 | 0.4757 | 1.1307 | 2.2143 | 0.4205 |
Xylitol | 0.8744 | 0.4759 | 1.5649 | 0.8511 | 0.8271 | 1.6353 |
Factors:
F1 | Genotype:Columbai-O_WT | Treatment:1/2MS-media_3weeks | Tissue Type:Whole Plant |
F2 | Genotype:Columbai-O_WT | Treatment:1/2MS-media_4weeks | Tissue Type:Whole Plant |
F3 | Genotype:Columbai-O_WT | Treatment:SoilGrown_4weeks | Tissue Type:Leaves |
F4 | Genotype:SALK_108849C_KO | Treatment:1/2MS-media_3weeks | Tissue Type:Whole Plant |
F5 | Genotype:SALK_108849C_KO | Treatment:1/2MS-media_4weeks | Tissue Type:Whole Plant |
F6 | Genotype:SALK_108849C_KO | Treatment:SoilGrown_4weeks | Tissue Type:Leaves |