Data for Arabidopsis Nit1 knockout metabolomics (Study ST001062)

(Analysis AN001737)

Values for each metabolite have been scaled by dividing by the mean across all factors

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MetaboliteF1F2F3F4F5F6
1,4-Butynediol 0.8735 0.4718 2.5587 0.6077 0.5914 1.3293
1,4-Cyclohexanedicarboxylic acid 0.7740 0.9582 1.6215 0.8807 0.6030 1.4502
2,4-Dibromophenol 0.8513 0.7169 1.2410 0.8296 0.7996 1.8274
2^-Deoxycytidine 1.7759 0.2724 0.1509 2.0133 0.1649 0.1318
2-Deoxyribose 1.8954 0.9721 0.0534 0.9389 0.5053 0.9396
(2E,4E)-Hexa-2,4-dienoic acid 1.3985 1.0769 0.3429 1.1364 1.3084 0.2911
2-Hydroxy-4-methylpentanoic acid 0.7667 1.7446 1.0498 0.7911 0.8673 1.1488
2-Hydroxybenzaldehyde 0.8924 1.0256 1.3759 1.0182 0.7163 1.0460
2-Hydroxynicotinic acid 0.1865 0.1304 3.0293 0.1722 0.0956 3.7538
2-Hydroxyphenylacetic acid 1.4845 1.7722 0.1841 1.3700 0.3028 0.1744
2-Keto-3-deoxyoctonic acid 1.0692 1.0824 1.4364 0.6734 0.7561 1.1970
2-Ketogluconic acid 1.1156 0.8670 1.2496 1.0512 0.5720 1.0055
2-Ketoglutaric Acid 0.2432 0.3033 3.1447 0.2489 0.1233 3.1932
(2-oxo-2,3-dihydro-1H-indol-3-yl)acetic acid 0.5911 0.4699 2.4267 0.6515 0.4417 2.0502
3-Hydroxy-3-methylglutaric acid 0.7792 2.4274 0.8669 0.9284 0.4134 0.8284
3-Hydroxyanthranilic acid 1.4261 1.4793 0.3235 1.1594 0.7825 0.3412
3-Hydroxybutyric acid 1.3150 0.7163 1.1329 0.8831 0.6210 1.1667
3-Hydroxyglutaric acid 0.9795 0.8880 1.3150 0.9173 0.6364 1.3497
3-Indoleacetonitrile 0.1834 0.1211 4.3355 0.1934 0.1094 2.4099
3-Methyladipic acid 0.6921 0.5347 2.0190 0.6443 0.3147 2.3484
3-Phosphoglyceric acid 2.0038 0.3813 0.1305 1.3445 0.8602 0.1559
3-Phosphonopropionic acid 0.6803 0.2771 2.1192 0.6864 0.7825 1.9823
4-Methylthiobutyl glucosinolate 0.8935 0.7899 1.2204 1.0189 0.7453 1.4049
4-Pyridoxic acid 0.8645 0.8040 1.2483 1.0359 0.8602 1.2702
5-Aminosalicylic acid 1.4641 1.3674 0.4470 1.3003 0.1780 0.6064
5-Hydroxy-3-indoleacetic acid 0.0840 0.0546 3.6850 0.0718 0.0508 3.5905
5-Hydroxymethyluridine 0.6429 0.2617 1.8929 0.8833 0.5666 2.1474
5-Hydroxytryptophan 1.0018 1.3138 0.7737 1.0978 1.0858 0.6441
6-Methylmercaptopurine 0.3556 0.4994 2.7147 0.5394 0.5427 2.2690
Acetylenedicarboxylic acid 0.9737 0.8155 1.3424 1.0778 0.6528 1.0949
Aconitic acid 0.4664 0.6968 3.3459 0.3212 0.3728 1.8072
Adenine 1.3547 0.8479 0.5425 1.3766 0.7639 0.5050
Alanine 0.7659 1.1082 1.5564 0.5851 0.8820 1.6432
Ala-Val 1.3138 0.5880 1.3404 0.8413 0.6668 1.1205
Allantoic acid 1.0806 0.9940 0.5364 1.2324 1.1743 0.7214
Allantoin 0.9708 1.0972 0.2510 1.1565 2.1276 0.2908
alpha-Hydroxyhippuric acid 1.2914 1.4228 0.0020 1.3214 1.4474 0.0043
Aminosalicylic acid 1.4443 0.8079 0.3812 1.2442 1.1651 0.3836
Arabitol 0.8000 0.8937 1.0187 0.8588 0.9925 1.7207
Arbutin 0.6061 0.6531 3.3053 0.6536 0.6490 0.7499
Arginine 0.9280 1.3907 0.1514 1.1868 2.0860 0.1615
Ascorbic acid 0.9112 0.6688 1.4949 0.8789 0.7770 1.4440
Benzene-1,2,4-triol 0.9865 0.8461 1.0196 0.9852 0.8337 1.3524
beta-Cyano-alanine 0.8148 0.7502 1.6402 0.8241 0.5836 1.6879
.beta.-D-Glucopyranose, 1,6-anhydro- 1.1975 0.7182 0.7901 1.4637 0.6457 0.6339
beta-Hydroxyisovaleric acid 1.0101 0.9576 0.7971 1.1388 0.9693 1.0030
beta-Nicotinamide adenine dinucleotide 1.4296 1.2694 0.0400 1.2740 1.3618 0.0388
Catechol 1.1249 0.6851 1.3053 1.0945 0.3965 1.2110
Cinnamic acid 0.1825 0.1136 2.9287 0.1317 0.1348 3.9137
Citraconic acid 1.7081 0.5360 0.4601 1.3937 0.4294 0.5545
Citramalic acid 1.0266 1.3712 0.9046 1.0201 0.8708 0.7678
Citric acid 0.2705 0.2513 3.8238 0.1993 0.1998 2.5303
Citrulline 0.8597 0.6321 1.5101 0.8866 0.9501 1.3727
Coniferylaldehyde 0.6147 0.3539 2.5555 0.5335 0.3916 2.2606
Cyclic adenosine diphosphate ribose 1.2111 1.2549 0.0612 0.9258 1.3113 1.1216
Cysteic Acid 0.9514 0.8204 1.3131 0.8860 0.8862 1.2784
Cystine 1.1329 1.2426 0.1810 1.1758 1.7315 0.2789
Dehydroascorbic acid 0.7510 0.4363 2.2596 0.5787 0.3864 2.1466
D-(+)-Galacturonic acid 0.8458 1.1575 0.4974 1.1003 2.0149 0.4288
D-Gluconic acid 1.0329 1.8079 0.3891 1.0044 1.3604 0.3742
D-(+)-Glyceric acid 1.3048 1.1747 0.3778 1.4904 0.5291 0.4604
Dihydro-4,4-dimethyl-2,3-furandione 1.0482 0.7894 1.2839 0.9239 0.6056 1.3722
Dihydrocoumarin 0.7903 0.5645 2.1970 0.6262 0.5126 1.7956
Dihydroorotic acid 0.3347 0.1597 2.9251 0.1597 0.2882 3.3872
Dihydroxyacetone phosphate 0.8377 0.4788 1.5528 1.1910 0.5103 1.4056
D-(+)-Malic acid 0.9515 1.2017 1.2894 0.7947 0.6281 1.3459
D-(-)-Mannitol 0.8480 1.0054 0.9832 0.8498 1.5907 0.9746
D-Mannose 6-phosphate 1.5762 0.5116 0.0083 1.7233 1.0542 0.0435
D-(+)-Trehalose 0.8099 0.6250 2.0199 0.5673 0.8186 1.6783
Ferulic acid 0.7685 1.0836 1.5133 0.5521 1.1064 1.5424
Fructose-1-phosphate 0.9911 0.4952 1.1975 1.0260 0.7712 1.5048
Fumaric acid 0.7535 0.3845 2.0462 0.7447 0.4366 2.0527
Galactinol 0.8195 1.8844 0.8121 0.6176 1.2895 1.0459
Galactonic acid 1.0925 1.0988 0.8408 1.0434 1.0074 0.8039
Galactose 0.9073 0.7625 1.5831 0.8406 0.6753 1.4411
.gamma.-Glu-Cys 0.5304 0.1598 2.6125 0.5813 0.4540 2.4022
Geniposide 1.5444 1.8490 0.0835 1.2031 0.5836 0.1134
Glucoraphanin 0.7480 0.7876 1.9977 0.5178 0.5544 2.0064
Glucose-6-phosphate 0.9667 0.5827 0.8466 0.9673 0.7823 1.9094
Glucuronic acid 1.0538 1.0607 0.8202 1.0912 0.7223 1.1310
Glu-Gln 0.9227 1.9157 0.1996 1.0643 1.7119 0.1966
Glutamic acid 0.8418 0.7266 1.6567 0.7757 0.7115 1.6064
Glutamine 0.8828 1.0485 1.1517 0.8885 1.1340 1.0852
Glutathione (oxidized) 1.4480 1.3985 0.1730 1.1022 1.0841 0.3358
Glutathione (reduced) 0.4407 0.1167 2.1859 0.5854 0.5537 2.9292
Glyceraldehyde 1.1762 0.9236 0.4060 1.6704 0.6803 0.4381
Glycolic acid 0.9122 2.9937 0.5911 0.5840 0.6817 0.6571
Guanine 1.7531 0.1836 0.2418 1.8805 0.3201 0.2596
Guanosine 0.8232 0.6886 1.4988 0.8054 0.9751 1.5184
Guanosine-3^,5^-cyclic monophosphate 1.4216 0.4578 0.8494 1.3156 0.4333 0.9080
Guanosine-5^-monophosphate 1.3222 1.3201 0.1577 1.0899 1.2523 0.5143
Gulonolactone 1.1995 0.7356 1.1255 0.9596 0.6042 1.2430
Histidine 0.8425 1.1198 0.1960 0.9138 2.9175 0.2134
Homoarginine 0.8003 1.3200 0.9357 0.8190 1.5533 0.8888
Homoserine 0.6887 1.0231 1.6089 0.7404 0.7459 1.6688
Homovanillic acid 0.7750 0.4260 2.1396 0.7706 0.3961 1.8714
Hypoxanthine 1.3878 0.6739 0.6856 1.0966 0.7436 1.0088
Inosine 0.8877 1.1507 0.8041 0.9044 0.9420 1.4843
Inositol 0.9013 0.4959 1.8046 0.6837 0.4460 2.0144
Isocitric acid 1.3649 0.6751 0.8738 0.7654 0.9555 1.2569
Isoleucine 0.8797 1.0904 1.0175 0.9732 1.0353 1.1265
Isomaltose B 0.9100 0.7639 1.2588 0.8595 1.1005 1.2993
Kaempferol-3-O-beta-glucopyranosyl-7-O-alpha-rhamnopyranoside 1.0585 0.3763 1.5595 1.1951 0.2663 1.3330
Kynurenic acid 0.7853 0.5873 1.8145 0.7631 0.7022 1.7240
Lactitol 0.7464 1.3105 1.0633 0.9115 1.1810 1.0723
Lactobionic acid 1.0669 1.9371 0.4870 0.9273 1.0661 0.5206
Lactose B 0.9041 0.8376 1.2653 1.0332 0.8425 1.1695
Laricitrin 1.3544 0.4373 2.0559 0.6858 0.6694 0.7636
L-.gamma.-Glutamyl-L-glutamic Acid 0.3638 1.0042 0.6743 0.5369 2.2786 2.0585
Linoleic acid 0.4970 0.4497 3.3546 0.3861 0.3305 1.9129
Lipoic acid 0.9078 0.3387 1.2345 0.6831 0.4754 2.7014
L-N.gamma.-Monomethylarginine 0.8851 1.4195 0.2126 1.1170 2.1798 0.1843
Lysine 0.6083 1.1797 0.7205 0.8097 2.4046 0.7623
Maleic acid 0.5369 0.3868 2.8094 0.6289 0.3399 1.9932
Malic acid 1.0864 0.4833 1.2741 1.1258 0.5977 1.2557
Malonic acid 1.2219 1.1690 0.7709 1.0463 0.7401 0.8282
Maltotriose 0.7216 0.9235 1.8876 0.7792 0.5076 1.5966
Melezitose 0.7361 1.2952 1.4298 0.8376 1.3604 0.6960
Methioninesulfoxide 0.8726 0.8565 1.3759 0.8590 0.8835 1.3761
Methyl-4-hydroxy-3-methoxybenzoate 0.1618 0.2036 4.0404 0.1771 0.1859 2.6157
Methylacetate 0.7191 0.8745 1.8749 0.7039 0.3291 1.9793
Methyl-beta-galactopyranoside 1.0890 0.5401 0.9831 1.1732 1.0128 0.9830
Mucic acid 1.3257 0.8489 0.0785 1.2187 1.9959 0.0785
N-Acetylaspartic acid 1.4135 1.3566 0.1702 1.2062 1.1871 0.1501
N-Acetylglutamic acid 0.6897 0.9753 1.4735 0.8681 1.0493 1.3124
N-Acetylglycine 1.1791 1.0492 0.6298 1.3112 0.9340 0.4880
N-Acetylleucine 0.3583 0.2860 3.0272 0.3569 0.2418 2.8003
N-Acetylmannosamine 0.7497 0.9281 1.5528 0.9063 0.6409 1.5089
N-Acetylneuraminic acid 1.3465 1.1208 0.4705 1.3344 0.5812 0.5792
N-Acetylserine 0.8990 0.9342 1.5590 0.8301 0.8478 1.1557
N-alpha-Acetyl-L-ornithine 1.5735 1.6496 0.3663 0.6573 1.3209 0.2400
N-epsilon-Acetyllysine 0.8678 0.9055 1.2719 0.8938 0.9442 1.3156
N-Formyl-L-methionine 0.8389 0.9122 1.2006 1.0914 0.7751 1.2397
N-Methylalanine 0.8573 0.7471 1.6431 0.7657 0.6997 1.6011
N-Methylserine 0.9589 1.0017 1.0733 0.9295 0.9376 1.1921
N,N-Dimethylarginine 0.9345 1.5528 0.2356 1.0916 1.9527 0.2111
N,N-Dimethylglycine 0.8070 1.0697 0.8595 1.0985 1.4501 0.7940
O-Phosphocolamine 1.0985 1.3525 0.5720 1.0746 1.0274 0.7309
Ornithine 0.6351 1.1037 0.1648 0.8830 3.4673 0.1479
Orotic acid 0.8389 0.6813 2.1066 0.7501 0.4386 1.5271
Oxaloacetic acid 0.0059 0.0087 3.8237 0.0052 0.0091 3.8050
Palmitic acid 0.7741 0.6698 2.4095 0.6581 0.5535 1.4082
Pantothenic acid 1.0705 1.1476 0.8376 1.0006 0.9887 0.8958
Parabanic acid 1.6251 0.5489 1.0417 1.2709 0.3680 0.3986
Phenylacetylglutamine 0.8726 1.0723 0.5817 1.0348 1.7365 0.7792
Phenylalanine 0.7095 1.0826 1.2617 0.7604 1.2784 1.3491
Phenylphosphoric acid 0.6869 0.5381 1.6024 0.6211 0.5188 2.6094
Phenylpyruvic acid 0.2165 0.1647 4.2398 0.1743 0.1639 2.3818
Phosphoenolpyruvic acid 1.2792 1.1220 0.0603 1.1270 1.8090 0.2640
Phosphoric acid 1.3220 1.2914 0.0024 1.3997 1.3789 0.0041
Propionic acid 1.5173 0.6715 0.5026 1.2839 0.8404 0.5167
Pseudouridine 0.9312 1.2330 0.6607 1.1608 1.2839 0.6537
Pyroglutamic acid 0.8407 0.7394 1.6481 0.7730 0.7053 1.6152
Pyruvic acid 0.7058 0.7363 1.6034 0.6157 0.5882 2.3160
Quercetin-3-O-beta-glucopyranosyl-7-O-alpha-rhamnopyranoside 1.8195 0.7925 0.2108 1.6212 0.2445 0.1110
rac-Glycerol 3-phosphoate 1.2674 0.6710 0.7023 1.2498 0.8761 0.8026
Raffinose 1.0480 1.3934 0.6086 0.8252 1.1870 1.0433
Ribitol 0.8236 1.3418 0.2642 1.0661 2.3395 0.2568
Ribose-5-phosphate 0.9220 0.4463 1.0420 0.8740 0.5984 2.2874
Robinin 0.8711 0.5122 2.3167 0.7147 0.3078 1.6227
S-(1,2-DICARBOXYETHYL)GLUTATHIONE 1.0510 0.7946 0.0248 1.7322 1.7237 0.0212
Salicylic acid 0.7798 0.6161 2.3456 0.5570 0.2843 1.9700
Sarcosine 1.0546 1.1810 0.5807 1.2846 1.0735 0.5430
Serine 1.2357 0.3297 1.0890 1.2668 0.5045 1.1553
Shikimic acid 0.6761 0.5976 1.8673 0.9097 0.5290 1.7655
Sinapic acid 1.1203 0.7382 0.9813 0.8885 1.2282 1.0362
Sinapoyl malate 0.8241 0.6180 1.8997 0.6710 0.5074 1.9005
Sorbitol 0.7127 0.8829 1.7416 0.8527 0.9774 1.1948
Sorbose 1.2595 1.1301 0.3345 1.5337 0.7541 0.3271
Succinic acid 0.6773 0.8387 2.0177 0.6224 0.3437 2.0836
Tagatose 1.2283 0.8522 0.5120 1.5078 0.7303 0.5559
Taurine 1.5999 0.4211 0.1482 1.6297 0.4015 0.7749
Tryptophan 0.7841 1.2177 1.0078 0.9126 1.2507 1.0798
UDP-xylose 1.3624 1.1450 0.0633 1.2685 1.2296 0.4055
Uridine 1.0533 0.5314 1.4518 1.1235 0.4325 1.2603
Uridine-5-diphosphoacetylgalactosamine 1.4862 1.0898 0.0181 1.3942 1.2599 0.0181
Uridine diphosphate galactose 1.7252 0.7161 0.0051 1.4317 1.1526 0.0051
Vaccenic acid 0.9017 0.9280 1.7256 0.7614 0.8223 1.1417
Willardiine 0.6400 1.3098 0.4757 1.1307 2.2143 0.4205
Xylitol 0.8744 0.4759 1.5649 0.8511 0.8271 1.6353
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Factors:

F1Genotype:Columbai-O_WT | Treatment:1/2MS-media_3weeks | Tissue Type:Whole Plant
F2Genotype:Columbai-O_WT | Treatment:1/2MS-media_4weeks | Tissue Type:Whole Plant
F3Genotype:Columbai-O_WT | Treatment:SoilGrown_4weeks | Tissue Type:Leaves
F4Genotype:SALK_108849C_KO | Treatment:1/2MS-media_3weeks | Tissue Type:Whole Plant
F5Genotype:SALK_108849C_KO | Treatment:1/2MS-media_4weeks | Tissue Type:Whole Plant
F6Genotype:SALK_108849C_KO | Treatment:SoilGrown_4weeks | Tissue Type:Leaves
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