{
"METABOLOMICS WORKBENCH":{"STUDY_ID":"ST000234","ANALYSIS_ID":"AN000352","VERSION":"1","CREATED_ON":"2016-09-17"},
"PROJECT":{"PROJECT_TITLE":"FLUTE: Functionalizing Lists of Unknown TB Entities","PROJECT_TYPE":"NIH U19","PROJECT_SUMMARY":"functional genomics of proteins of unknown function in M. tuberculosis","INSTITUTE":"Weill Cornell Medical College, NY","DEPARTMENT":"Microbiology and Immunology","LAST_NAME":"Rhee","FIRST_NAME":"Kyu","ADDRESS":"#N/A","EMAIL":"kyr9001@med.cornell.edu","PHONE":"-"},
"STUDY":{"STUDY_TITLE":"ABMP of M. tuberculosis H37Rv Rv1130","STUDY_TYPE":"timecourse","STUDY_SUMMARY":"ABMP of M. tuberculosis H37Rv Rv1130","INSTITUTE":"Weill Cornell Medical College, NY","DEPARTMENT":"Microbiology and Immunology","LAST_NAME":"Rhee","FIRST_NAME":"Kyu","ADDRESS":"#N/A","EMAIL":"kyr9001@med.cornell.edu","PHONE":"-","NUM_GROUPS":"2 replicates X 3 timepoints"},
"SUBJECT":{"SUBJECT_TYPE":"-","SUBJECT_SPECIES":"Mycobacterium tuberculosis H37Rv"},
"SUBJECT_SAMPLE_FACTORS":[
{
"Subject ID":"Rv1130",
"Sample ID":"1130_A_0",
"Factors":{"timepoint (min)":"0"}
},
{
"Subject ID":"Rv1130",
"Sample ID":"1130_B_0",
"Factors":{"timepoint (min)":"0"}
},
{
"Subject ID":"Rv1130",
"Sample ID":"1130_A_20",
"Factors":{"timepoint (min)":"20"}
},
{
"Subject ID":"Rv1130",
"Sample ID":"1130_B_20",
"Factors":{"timepoint (min)":"20"}
},
{
"Subject ID":"Rv1130",
"Sample ID":"1130_A_40",
"Factors":{"timepoint (min)":"40"}
},
{
"Subject ID":"Rv1130",
"Sample ID":"1130_B_40",
"Factors":{"timepoint (min)":"40"}
}
],
"COLLECTION":{"COLLECTION_SUMMARY":"protein expression","COLLECTION_PROTOCOL_ID":"Rv1130 from M. tuberculosis H37Rv was expressed in E. coli cells and purified...","COLLECTION_VIALS":"polypropylene microfuge tubes","STORAGE_VIALS":"Agilent polypropylene conical bottom vials"},
"TREATMENT":{"TREATMENT_SUMMARY":"-"},
"SAMPLEPREP":{"SAMPLEPREP_SUMMARY":"10 uM enzyme incubated at 37C in M. bovis whole-cell extract","PROCESSING_METHOD":"extract was lyophilized and resuspended in 20 mM Tris-HCL pH 8.0","PROCESSING_STORAGE_CONDITIONS":"cell pellet frozen at -80C","EXTRACTION_METHOD":"70% acetonitrile","EXTRACT_CLEANUP":"centrifugation followed by aspiration of supernatant and lyophilization","EXTRACT_STORAGE":"frozen at -80C"},
"CHROMATOGRAPHY":{"CHROMATOGRAPHY_TYPE":"-","INSTRUMENT_NAME":"-","COLUMN_NAME":"-"},
"ANALYSIS":{"ANALYSIS_TYPE":"MS","LABORATORY_NAME":"Rhee Lab","SOFTWARE_VERSION":"XCMS online","DETECTOR_TYPE":"Agilent 6220 ToF MS"},
"MS":{"INSTRUMENT_NAME":"Agilent 6220 TOF","INSTRUMENT_TYPE":"-","MS_TYPE":"ESI","ION_MODE":"NEGATIVE","CAPILLARY_TEMPERATURE":"3500","COLLISION_GAS":"10 l/min","DRY_GAS_FLOW":"250","DRY_GAS_TEMP":"135V","IONIZATION_POTENTIAL":"5 ppm","MATRIX":"35","NEBULIZER":"400","SAMPLE_DRIPPING":"50-1200","SCANNING":"1.4","SCANNING_RANGE":"65"},
"MS_METABOLITE_DATA":{
"Units":"Peak intensity",
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