{
"METABOLOMICS WORKBENCH":{"STUDY_ID":"ST000209","ANALYSIS_ID":"AN000311","VERSION":"1","CREATED_ON":"2016-09-17"},

"PROJECT":{"PROJECT_TITLE":"Wt and KO macrophage studies","PROJECT_SUMMARY":"Temperol metabolites profile of Wt and KO macrophage in response to LPS","INSTITUTE":"Henry Ford Health System","DEPARTMENT":"Neurology","LABORATORY":"Giri Lab","LAST_NAME":"Giri","FIRST_NAME":"Shailendra","ADDRESS":"Detroit, MI","EMAIL":"sgiri1@hfhs.org","PHONE":"313-916-7725"},

"STUDY":{"STUDY_TITLE":"Glycolysis/TCA/Nucleotide_Wt_KO_TimeCourse_LPS","STUDY_TYPE":"Wild type and AMPK KO bone marrow derived macrophage were stimulated with LPS for various time period and plates were frozen in liquid nitrogen after washing sodium acetate (200uM) solution and kept in deep freezer for further analysis.","STUDY_SUMMARY":"Wild type and AMPK KO bone marrow derived macrophage were stimulated with LPS for various time period and plates were frozen in liquid nitrogen after washing sodium acetate (200uM) solution and kept in deep freezer for further analysis.","INSTITUTE":"University of Michigan","DEPARTMENT":"Biomedical Research Core Facilities","LABORATORY":"Metabolomics core","LAST_NAME":"Kachman","FIRST_NAME":"Maureen","ADDRESS":"6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714","EMAIL":"mkachman@umich.edu","PHONE":"-","NUM_GROUPS":"12","TOTAL_SUBJECTS":"48"},

"SUBJECT":{"SUBJECT_TYPE":"-","SUBJECT_SPECIES":"Mus musculus","TAXONOMY_ID":"10090"},
"SUBJECT_SAMPLE_FACTORS":[
{
"Subject ID":"SU0012202",
"Sample ID":"S00018219",
"Factors":{"time course":"0h","Cell type":"KO macrophage","Treatment":"untreated"}
},
{
"Subject ID":"SU0012202",
"Sample ID":"S00018220",
"Factors":{"time course":"0h","Cell type":"KO macrophage","Treatment":"untreated"}
},
{
"Subject ID":"SU0012202",
"Sample ID":"S00018221",
"Factors":{"time course":"0h","Cell type":"KO macrophage","Treatment":"untreated"}
},
{
"Subject ID":"SU0012202",
"Sample ID":"S00018222",
"Factors":{"time course":"0h","Cell type":"KO macrophage","Treatment":"untreated"}
},
{
"Subject ID":"SU0012196",
"Sample ID":"S00018195",
"Factors":{"time course":"0h","Cell type":"Wt macrophage","Treatment":"untreated"}
},
{
"Subject ID":"SU0012196",
"Sample ID":"S00018196",
"Factors":{"time course":"0h","Cell type":"Wt macrophage","Treatment":"untreated"}
},
{
"Subject ID":"SU0012196",
"Sample ID":"S00018197",
"Factors":{"time course":"0h","Cell type":"Wt macrophage","Treatment":"untreated"}
},
{
"Subject ID":"SU0012196",
"Sample ID":"S00018198",
"Factors":{"time course":"0h","Cell type":"Wt macrophage","Treatment":"untreated"}
},
{
"Subject ID":"SU0012205",
"Sample ID":"S00018231",
"Factors":{"time course":"12h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012205",
"Sample ID":"S00018232",
"Factors":{"time course":"12h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012205",
"Sample ID":"S00018233",
"Factors":{"time course":"12h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012205",
"Sample ID":"S00018234",
"Factors":{"time course":"12h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012199",
"Sample ID":"S00018207",
"Factors":{"time course":"12h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012199",
"Sample ID":"S00018208",
"Factors":{"time course":"12h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012199",
"Sample ID":"S00018209",
"Factors":{"time course":"12h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012199",
"Sample ID":"S00018210",
"Factors":{"time course":"12h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012206",
"Sample ID":"S00018235",
"Factors":{"time course":"18h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012206",
"Sample ID":"S00018236",
"Factors":{"time course":"18h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012206",
"Sample ID":"S00018237",
"Factors":{"time course":"18h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012206",
"Sample ID":"S00018238",
"Factors":{"time course":"18h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012200",
"Sample ID":"S00018211",
"Factors":{"time course":"18h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012200",
"Sample ID":"S00018212",
"Factors":{"time course":"18h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012200",
"Sample ID":"S00018213",
"Factors":{"time course":"18h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012200",
"Sample ID":"S00018214",
"Factors":{"time course":"18h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012207",
"Sample ID":"S00018239",
"Factors":{"time course":"24h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012207",
"Sample ID":"S00018240",
"Factors":{"time course":"24h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012207",
"Sample ID":"S00018241",
"Factors":{"time course":"24h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012207",
"Sample ID":"S00018242",
"Factors":{"time course":"24h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012201",
"Sample ID":"S00018215",
"Factors":{"time course":"24h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012201",
"Sample ID":"S00018216",
"Factors":{"time course":"24h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012201",
"Sample ID":"S00018217",
"Factors":{"time course":"24h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012201",
"Sample ID":"S00018218",
"Factors":{"time course":"24h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012203",
"Sample ID":"S00018223",
"Factors":{"time course":"3h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012203",
"Sample ID":"S00018224",
"Factors":{"time course":"3h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012203",
"Sample ID":"S00018225",
"Factors":{"time course":"3h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012203",
"Sample ID":"S00018226",
"Factors":{"time course":"3h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012197",
"Sample ID":"S00018199",
"Factors":{"time course":"3h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012197",
"Sample ID":"S00018200",
"Factors":{"time course":"3h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012197",
"Sample ID":"S00018201",
"Factors":{"time course":"3h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012197",
"Sample ID":"S00018202",
"Factors":{"time course":"3h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012204",
"Sample ID":"S00018227",
"Factors":{"time course":"6h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012204",
"Sample ID":"S00018228",
"Factors":{"time course":"6h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012204",
"Sample ID":"S00018229",
"Factors":{"time course":"6h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012204",
"Sample ID":"S00018230",
"Factors":{"time course":"6h","Cell type":"KO macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012198",
"Sample ID":"S00018203",
"Factors":{"time course":"6h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012198",
"Sample ID":"S00018204",
"Factors":{"time course":"6h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012198",
"Sample ID":"S00018205",
"Factors":{"time course":"6h","Cell type":"Wt macrophage","Treatment":"LPS"}
},
{
"Subject ID":"SU0012198",
"Sample ID":"S00018206",
"Factors":{"time course":"6h","Cell type":"Wt macrophage","Treatment":"LPS"}
}
],
"COLLECTION":{"COLLECTION_SUMMARY":"-","SAMPLE_TYPE":"Macrophages"},

"TREATMENT":{"TREATMENT_SUMMARY":"-"},

"SAMPLEPREP":{"SAMPLEPREP_SUMMARY":"-","SAMPLEPREP_PROTOCOL_FILENAME":"Gly-TCA-nucleotides_analysis_protocol-2015-03-09.docx"},

"CHROMATOGRAPHY":{"CHROMATOGRAPHY_TYPE":"HILIC","INSTRUMENT_NAME":"Agilent 1260","COLUMN_NAME":"Phenomenex Luna NH2 (150 x 1mm, 3um)","METHODS_ID":"AQM021","METHODS_FILENAME":"QTOF-002-HILIC-35min-1mm_bottompheater.m.zip"},

"ANALYSIS":{"ANALYSIS_TYPE":"MS","LABORATORY_NAME":"MRC2 (University of Michigan)","ACQUISITION_PARAMETERS_FILE":"QTOF-002-HILIC-35min-1mm_bottompheater.m.zip"},

"MS":{"MS_COMMENTS":"-","INSTRUMENT_NAME":"Agilent 6520 QTOF","INSTRUMENT_TYPE":"QTOF","MS_TYPE":"ESI","ION_MODE":"NEGATIVE"},

"MS_METABOLITE_DATA":{
"Units":"pmol/µg protein",

"Data":[{"Metabolite":"2 or 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