{
"METABOLOMICS WORKBENCH":{"STUDY_ID":"ST000213","ANALYSIS_ID":"AN000315","VERSION":"1","CREATED_ON":"2016-09-17"},

"PROJECT":{"PROJECT_TITLE":"Dietary emulsifying agents","PROJECT_SUMMARY":"SCFA and Bile acid composition in conventional and GermFree SW treated with","INSTITUTE":"Georgia State University","DEPARTMENT":"Biology","LABORATORY":"Gewirtz's Lab","LAST_NAME":"Gewirtz","FIRST_NAME":"Andrew","ADDRESS":"14 Marietta Street, NW  Atlanta, GA 30303-2813","EMAIL":"bchassaing@gsu.edu","PHONE":"404-413-3589"},

"STUDY":{"STUDY_TITLE":"Germfree vs Conventional SW Studies (part II)","STUDY_TYPE":"SCFA and Bile acid composition in conventional and GermFree SW treated with","STUDY_SUMMARY":"SCFA and Bile acid composition in conventional and GermFree SW treated with","INSTITUTE":"University of Michigan","DEPARTMENT":"Biomedical Research Core Facilities","LABORATORY":"Metabolomics core","LAST_NAME":"Kachman","FIRST_NAME":"Maureen","ADDRESS":"6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714","EMAIL":"mkachman@umich.edu","PHONE":"-","NUM_GROUPS":"6","TOTAL_SUBJECTS":"66"},

"SUBJECT":{"SUBJECT_TYPE":"-","SUBJECT_SPECIES":"Mus musculus","TAXONOMY_ID":"10088"},
"SUBJECT_SAMPLE_FACTORS":[
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"Subject ID":"SU0002961",
"Sample ID":"S00012778",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Conventionaly raised animal"}
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{
"Subject ID":"SU0002962",
"Sample ID":"S00012779",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002963",
"Sample ID":"S00012780",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002964",
"Sample ID":"S00012781",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Conventionaly raised animal"}
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{
"Subject ID":"SU0002961",
"Sample ID":"S00012782",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Conventionaly raised animal"}
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{
"Subject ID":"SU0002962",
"Sample ID":"S00012783",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Conventionaly raised animal"}
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{
"Subject ID":"SU0002963",
"Sample ID":"S00012784",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002964",
"Sample ID":"S00012785",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002961",
"Sample ID":"S00012811",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Conventionaly raised animal"}
},
{
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"Sample ID":"S00012812",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002963",
"Sample ID":"S00012813",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002964",
"Sample ID":"S00012814",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002961",
"Sample ID":"S00012815",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002962",
"Sample ID":"S00012816",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002963",
"Sample ID":"S00012817",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002964",
"Sample ID":"S00012818",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002947",
"Sample ID":"S00012764",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002948",
"Sample ID":"S00012765",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002949",
"Sample ID":"S00012766",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002950",
"Sample ID":"S00012767",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002947",
"Sample ID":"S00012797",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002948",
"Sample ID":"S00012798",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002949",
"Sample ID":"S00012799",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002950",
"Sample ID":"S00012800",
"Factors":{"treatment":"CMC","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002965",
"Sample ID":"S00012786",
"Factors":{"treatment":"P80","Germfree versus conventional":"Conventionaly raised animal"}
},
{
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"Sample ID":"S00012787",
"Factors":{"treatment":"P80","Germfree versus conventional":"Conventionaly raised animal"}
},
{
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"Sample ID":"S00012788",
"Factors":{"treatment":"P80","Germfree versus conventional":"Conventionaly raised animal"}
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{
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"Factors":{"treatment":"P80","Germfree versus conventional":"Conventionaly raised animal"}
},
{
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"Sample ID":"S00012790",
"Factors":{"treatment":"P80","Germfree versus conventional":"Conventionaly raised animal"}
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{
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"Sample ID":"S00012791",
"Factors":{"treatment":"P80","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002968",
"Sample ID":"S00012792",
"Factors":{"treatment":"P80","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002965",
"Sample ID":"S00012819",
"Factors":{"treatment":"P80","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002966",
"Sample ID":"S00012820",
"Factors":{"treatment":"P80","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002967",
"Sample ID":"S00012821",
"Factors":{"treatment":"P80","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002965",
"Sample ID":"S00012822",
"Factors":{"treatment":"P80","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002966",
"Sample ID":"S00012823",
"Factors":{"treatment":"P80","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002967",
"Sample ID":"S00012824",
"Factors":{"treatment":"P80","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002968",
"Sample ID":"S00012825",
"Factors":{"treatment":"P80","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002951",
"Sample ID":"S00012768",
"Factors":{"treatment":"P80","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002952",
"Sample ID":"S00012769",
"Factors":{"treatment":"P80","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002953",
"Sample ID":"S00012770",
"Factors":{"treatment":"P80","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002954",
"Sample ID":"S00012771",
"Factors":{"treatment":"P80","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002955",
"Sample ID":"S00012772",
"Factors":{"treatment":"P80","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002951",
"Sample ID":"S00012801",
"Factors":{"treatment":"P80","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002952",
"Sample ID":"S00012802",
"Factors":{"treatment":"P80","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002953",
"Sample ID":"S00012803",
"Factors":{"treatment":"P80","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002954",
"Sample ID":"S00012804",
"Factors":{"treatment":"P80","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002955",
"Sample ID":"S00012805",
"Factors":{"treatment":"P80","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002956",
"Sample ID":"S00012773",
"Factors":{"treatment":"Water","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002957",
"Sample ID":"S00012774",
"Factors":{"treatment":"Water","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002958",
"Sample ID":"S00012775",
"Factors":{"treatment":"Water","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002959",
"Sample ID":"S00012776",
"Factors":{"treatment":"Water","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002960",
"Sample ID":"S00012777",
"Factors":{"treatment":"Water","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002956",
"Sample ID":"S00012806",
"Factors":{"treatment":"Water","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002957",
"Sample ID":"S00012807",
"Factors":{"treatment":"Water","Germfree versus conventional":"Conventionaly raised animal"}
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{
"Subject ID":"SU0002958",
"Sample ID":"S00012808",
"Factors":{"treatment":"Water","Germfree versus conventional":"Conventionaly raised animal"}
},
{
"Subject ID":"SU0002959",
"Sample ID":"S00012809",
"Factors":{"treatment":"Water","Germfree versus conventional":"Conventionaly raised animal"}
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{
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"Sample ID":"S00012810",
"Factors":{"treatment":"Water","Germfree versus conventional":"Conventionaly raised animal"}
},
{
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"Sample ID":"S00012760",
"Factors":{"treatment":"Water","Germfree versus conventional":"Germfree animal"}
},
{
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"Sample ID":"S00012761",
"Factors":{"treatment":"Water","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002945",
"Sample ID":"S00012762",
"Factors":{"treatment":"Water","Germfree versus conventional":"Germfree animal"}
},
{
"Subject ID":"SU0002946",
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"Factors":{"treatment":"Water","Germfree versus conventional":"Germfree animal"}
},
{
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"Factors":{"treatment":"Water","Germfree versus conventional":"Germfree animal"}
},
{
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"Sample ID":"S00012794",
"Factors":{"treatment":"Water","Germfree versus conventional":"Germfree animal"}
},
{
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"Factors":{"treatment":"Water","Germfree versus conventional":"Germfree animal"}
},
{
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"Sample ID":"S00012796",
"Factors":{"treatment":"Water","Germfree versus conventional":"Germfree animal"}
}
],
"COLLECTION":{"COLLECTION_SUMMARY":"-","SAMPLE_TYPE":"Faces"},

"TREATMENT":{"TREATMENT_SUMMARY":"-"},

"SAMPLEPREP":{"SAMPLEPREP_SUMMARY":"-","SAMPLEPREP_PROTOCOL_FILENAME":"Bile-acids-2015-03-11.docx"},

"CHROMATOGRAPHY":{"CHROMATOGRAPHY_TYPE":"-","INSTRUMENT_NAME":"-","COLUMN_NAME":"-","METHODS_ID":"AQM040","METHODS_FILENAME":"2014-03-27-Bile_acid-full-ESN-insert.m.zip"},

"ANALYSIS":{"ANALYSIS_TYPE":"MS","LABORATORY_NAME":"MRC2 (University of Michigan)","ACQUISITION_PARAMETERS_FILE":"2014-03-27-Bile_acid-full-ESN-insert.m.zip","PROCESSING_PARAMETERS_FILE":"EX00249-Bile-Acids-Quant-method.m.zip"},

"MS":{"MS_COMMENTS":"-","INSTRUMENT_NAME":"Agilent 6490 QQQ","INSTRUMENT_TYPE":"Triple quadrupole","MS_TYPE":"ESI","ION_MODE":"NEGATIVE"},

"MS_METABOLITE_DATA":{
"Units":"pmol/mg sample",

"Data":[{"Metabolite":"a-Muricholic acid","S00012811":"10.0379","S00012812":"0.8033","S00012813":"3.7723","S00012814":"15.6415","S00012815":"27.4867","S00012816":"6.0112","S00012817":"171.5015","S00012818":"18.9537","S00012797":"0.0842","S00012798":"0.0430","S00012799":"0.3707","S00012800":"0.0653","S00012819":"15.1264","S00012820":"2.4226","S00012821":"12.0913","S00012822":"11.4196","S00012823":"11.1015","S00012824":"60.3824","S00012825":"0.0592","S00012801":"0.1228","S00012802":"0.0502","S00012803":"0.0675","S00012804":"0.0574","S00012805":"0.0467","S00012806":"0.4635","S00012807":"11.3051","S00012808":"0.7910","S00012809":"1.0608","S00012810":"1.0421","S00012793":"0.0592","S00012794":"0.0509","S00012795":"0.0543","S00012796":"0.0705"},{"Metabolite":"b-Muricholic 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}

}