{
"METABOLOMICS WORKBENCH":{"STUDY_ID":"ST000248","ANALYSIS_ID":"AN000392","VERSION":"1","CREATED_ON":"2016-09-17"},

"PROJECT":{"PROJECT_TITLE":"Metabolic heterogeneity in Glioblastoma","PROJECT_SUMMARY":"Glioblastoma (GB) is the most common and complex primary brain tumor in adults has a dismal prognosis, which is attributed largely to the extreme in the cells that make up the cancer and the continual molecular, genetic and adaptations driving tumor initiation, propagation and resistance to treatments. The most important clinical target to prevent these mechanisms of propagation and disease recurrence may be a subset of tumor cells, cancer stem Hence, identifying targetable key features of this population is of great for the elaboration of strategies to prevent disease initiation and propagation well as recurrence post treatments. In response to i) the limited success to GB that remains universally fatal, ii) the evidences pointing to tumor as the greatest obstacle to achieve therapeutic efficacy and iii) the understanding and importance of bioenergetics in tumor biology and the critical to integrate metabolism into treatment paradigms, we propose a new model in the unique and unprecedented hypothesis of an association between GB a distinct slow-cycling cancer stem cell subpopulation and metabolic","INSTITUTE":"University of Florida","DEPARTMENT":"McKnight Brain Institute, Neurosurgery","LAST_NAME":"Deleyrolle","FIRST_NAME":"Loic","ADDRESS":"#N/A","EMAIL":"l.deleyrolle@gmail.com","PHONE":"352-682-1961"},

"STUDY":{"STUDY_TITLE":"Metabolic heterogeneity in Glioblastoma","STUDY_TYPE":"Multiple patient-derived cell lines screening","STUDY_SUMMARY":"2 cell populations [slow and fast-cycling cells] were isolated from 3 different glioblastoma stem cell lines [L0, L1, L2].","INSTITUTE":"University of Florida","DEPARTMENT":"SECIM","LABORATORY":"Garrett Lab","LAST_NAME":"Deleyrolle","FIRST_NAME":"Loic","ADDRESS":"R3-226 Academic Research Building, Department of Biochemistry and Molecular PO Box 100245, Gainesville, FL 32610-0245","EMAIL":"l.deleyrolle@gmail.com","PHONE":"-","NUM_GROUPS":"2","TOTAL_SUBJECTS":"6","STUDY_COMMENTS":"Line names: L0, L1 & L2. Subpopulation names: slow-cycling cells [S], cell [F]. Sample list: L0-S, L0-F, L1-S, L1-F, L2-S, L2-F"},

"SUBJECT":{"SUBJECT_TYPE":"Human","SUBJECT_SPECIES":"Homo sapiens","TAXONOMY_ID":"9606","SPECIES_GROUP":"Human"},
"SUBJECT_SAMPLE_FACTORS":[
{
"Subject ID":"-",
"Sample ID":"L0-fast",
"Factors":{"Cell population":"Fast-cycling cells"}
},
{
"Subject ID":"-",
"Sample ID":"L1-fast",
"Factors":{"Cell population":"Fast-cycling cells"}
},
{
"Subject ID":"-",
"Sample ID":"L2-fast",
"Factors":{"Cell population":"Fast-cycling cells"}
},
{
"Subject ID":"-",
"Sample ID":"L0-slow",
"Factors":{"Cell population":"Slow-cyling cells"}
},
{
"Subject ID":"-",
"Sample ID":"L1-slow",
"Factors":{"Cell population":"Slow-cyling cells"}
},
{
"Subject ID":"-",
"Sample ID":"L2-slow",
"Factors":{"Cell population":"Slow-cyling cells"}
}
],
"COLLECTION":{"COLLECTION_SUMMARY":"-","COLLECTION_PROTOCOL_FILENAME":"Deleyrolle_Collection.txt","SAMPLE_TYPE":"Cells"},

"TREATMENT":{"TREATMENT_SUMMARY":"-","TREATMENT_PROTOCOL_FILENAME":"Deleyrolle_Treatment_File.txt"},

"SAMPLEPREP":{"SAMPLEPREP_SUMMARY":"-","SAMPLEPREP_PROTOCOL_FILENAME":"Metabolomics_LCMSProtocol.pdf","SAMPLEPREP_PROTOCOL_COMMENTS":"Appendix A - Internal Standard Prep GLCMS.pdf"},

"CHROMATOGRAPHY":{"CHROMATOGRAPHY_TYPE":"Reversed phase","INSTRUMENT_NAME":"Thermo Q Exactive Orbitrap","COLUMN_NAME":"ACE Excel 2 C18-PFP (100 x 2.1mm, 2um)","METHODS_FILENAME":"Metabolomics_LCMSProtocol.pdf"},

"ANALYSIS":{"ANALYSIS_TYPE":"MS","LABORATORY_NAME":"Garrett Lab","DETECTOR_TYPE":"Orbitrap"},

"MS":{"MS_COMMENTS":"-","INSTRUMENT_NAME":"Thermo Q Exactive Orbitrap","INSTRUMENT_TYPE":"Orbitrap","MS_TYPE":"ESI","ION_MODE":"NEGATIVE"},

"MS_METABOLITE_DATA":{
"Units":"peak height",

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}

}