{
"METABOLOMICS WORKBENCH":{"STUDY_ID":"ST000510","ANALYSIS_ID":"AN000782","VERSION":"1","CREATED_ON":"December 6, 2016, 7:37 am"},

"PROJECT":{"PROJECT_TITLE":"Metabolic changes to maternal mouse liver tissue during and post-pregnancy.","PROJECT_SUMMARY":"Assessing metabolic changes to maternal rat liver tissue during and post-pregnancy. Liver tissue was harvested post-mortem from rats or mice without pregnancy (Nulliparous - NP), time course during pregnancy in days (P2-4, P11-13m P18-20), lactation day 10 (LD10), in during involution of the liver (I2, I4, I6, I8, I10) and 4-weeks regression after preganancy (R4).","INSTITUTE":"University of Colorado, Denver","LAST_NAME":"Nemkov","FIRST_NAME":"Travis","ADDRESS":"12801 E 17th Avenue Mail stop 8101","EMAIL":"travis.nemkov@ucdenver.edu","PHONE":"3037245798"},

"STUDY":{"STUDY_TITLE":"Assessing metabolic changes to maternal rat liver tissue during and post-pregnancy (part II)","STUDY_SUMMARY":"Assessing metabolic changes to maternal rat liver tissue during and post-pregnancy. Liver tissue was harvested post-mortem from rats or mice without pregnancy (Nulliparous - NP), time course during pregnancy in days (P2-4, P11-13m P18-20), lactation day 10 (LD10), in during involution of the liver (I2, I4, I6, I8, I10) and 4-weeks regression after preganancy (R4).","INSTITUTE":"University of Colorado Denver","LAST_NAME":"Nemkov","FIRST_NAME":"Travis","ADDRESS":"12801 E 17th Avenue Mail Stop 8101","EMAIL":"travis.nemkov@ucdenver.edu","PHONE":"3037245798"},

"SUBJECT":{"SUBJECT_TYPE":"Animal","SUBJECT_SPECIES":"Mus musculus","TAXONOMY_ID":"10090"},
"SUBJECT_SAMPLE_FACTORS":[
{
"Subject ID":"-",
"Sample ID":"NP_220",
"Factors":{"time_point":"NP"}
},
{
"Subject ID":"-",
"Sample ID":"NP_221",
"Factors":{"time_point":"NP"}
},
{
"Subject ID":"-",
"Sample ID":"NP_222",
"Factors":{"time_point":"NP"}
},
{
"Subject ID":"-",
"Sample ID":"NP_225",
"Factors":{"time_point":"NP"}
},
{
"Subject ID":"-",
"Sample ID":"NP_226",
"Factors":{"time_point":"NP"}
},
{
"Subject ID":"-",
"Sample ID":"NP_227",
"Factors":{"time_point":"NP"}
},
{
"Subject ID":"-",
"Sample ID":"LD10_200",
"Factors":{"time_point":"LD10"}
},
{
"Subject ID":"-",
"Sample ID":"LD10_204",
"Factors":{"time_point":"LD10"}
},
{
"Subject ID":"-",
"Sample ID":"LD10_213",
"Factors":{"time_point":"LD10"}
},
{
"Subject ID":"-",
"Sample ID":"LD10_236",
"Factors":{"time_point":"LD10"}
},
{
"Subject ID":"-",
"Sample ID":"LD10_237",
"Factors":{"time_point":"LD10"}
},
{
"Subject ID":"-",
"Sample ID":"LD10_240",
"Factors":{"time_point":"LD10"}
},
{
"Subject ID":"-",
"Sample ID":"I2_17",
"Factors":{"time_point":"I2"}
},
{
"Subject ID":"-",
"Sample ID":"I2_31",
"Factors":{"time_point":"I2"}
},
{
"Subject ID":"-",
"Sample ID":"I2_34",
"Factors":{"time_point":"I2"}
},
{
"Subject ID":"-",
"Sample ID":"I2_39",
"Factors":{"time_point":"I2"}
},
{
"Subject ID":"-",
"Sample ID":"I2_224",
"Factors":{"time_point":"I2"}
},
{
"Subject ID":"-",
"Sample ID":"I2_229",
"Factors":{"time_point":"I2"}
},
{
"Subject ID":"-",
"Sample ID":"I4_13",
"Factors":{"time_point":"I4"}
},
{
"Subject ID":"-",
"Sample ID":"I4_15",
"Factors":{"time_point":"I4"}
},
{
"Subject ID":"-",
"Sample ID":"I4_18",
"Factors":{"time_point":"I4"}
},
{
"Subject ID":"-",
"Sample ID":"I4_202",
"Factors":{"time_point":"I4"}
},
{
"Subject ID":"-",
"Sample ID":"I4_211",
"Factors":{"time_point":"I4"}
},
{
"Subject ID":"-",
"Sample ID":"I4_215",
"Factors":{"time_point":"I4"}
},
{
"Subject ID":"-",
"Sample ID":"I6_201",
"Factors":{"time_point":"I6"}
},
{
"Subject ID":"-",
"Sample ID":"I6_209",
"Factors":{"time_point":"I6"}
},
{
"Subject ID":"-",
"Sample ID":"I6_216",
"Factors":{"time_point":"I6"}
},
{
"Subject ID":"-",
"Sample ID":"I6_218",
"Factors":{"time_point":"I6"}
},
{
"Subject ID":"-",
"Sample ID":"I6_230",
"Factors":{"time_point":"I6"}
},
{
"Subject ID":"-",
"Sample ID":"I6_232",
"Factors":{"time_point":"I6"}
},
{
"Subject ID":"-",
"Sample ID":"I8_14",
"Factors":{"time_point":"I8"}
},
{
"Subject ID":"-",
"Sample ID":"I8_98b",
"Factors":{"time_point":"I8"}
},
{
"Subject ID":"-",
"Sample ID":"I8_99b",
"Factors":{"time_point":"I8"}
},
{
"Subject ID":"-",
"Sample ID":"I8_101b",
"Factors":{"time_point":"I8"}
},
{
"Subject ID":"-",
"Sample ID":"R4_203",
"Factors":{"time_point":"R4"}
},
{
"Subject ID":"-",
"Sample ID":"R4_214",
"Factors":{"time_point":"R4"}
},
{
"Subject ID":"-",
"Sample ID":"R4_232",
"Factors":{"time_point":"R4"}
},
{
"Subject ID":"-",
"Sample ID":"R4_239",
"Factors":{"time_point":"R4"}
},
{
"Subject ID":"-",
"Sample ID":"R4_243",
"Factors":{"time_point":"R4"}
}
],
"COLLECTION":{"COLLECTION_SUMMARY":"tissue was harvested, flash frozen in LiN2, milled with LiN2, and weighed on dry ice for metabolomics analysis"},

"TREATMENT":{"TREATMENT_SUMMARY":"Tissues were harvested at the appropriate time point during or post-pregnancy"},

"SAMPLEPREP":{"SAMPLEPREP_SUMMARY":"Frozen and milled liver tissue was suspended to 10 mg/ml in an extraction solution containing methanol/acetonitrile/water at a ratio of 5:3:2 (v/v/v). Suspensions were vortexed at 4C for 30 minutes and centrifuged at 10,000 g for 10 minutes, 4C. Supernatants were isolated and analyzed by LC-MS."},

"CHROMATOGRAPHY":{"CHROMATOGRAPHY_TYPE":"Reversed phase","INSTRUMENT_NAME":"Thermo Vanquish","COLUMN_NAME":"Kinetex C18-XB"},

"ANALYSIS":{"ANALYSIS_TYPE":"MS"},

"MS":{"MS_COMMENTS":"-","INSTRUMENT_NAME":"Thermo Q Exactive Orbitrap","INSTRUMENT_TYPE":"Orbitrap","MS_TYPE":"ESI","ION_MODE":"POSITIVE"},

"MS_METABOLITE_DATA":{
"Units":"arbitrary units",

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}

}