{
"METABOLOMICS WORKBENCH":{"STUDY_ID":"ST000681","ANALYSIS_ID":"AN001048","VERSION":"1","CREATED_ON":"June 30, 2017, 11:37 am"},

"PROJECT":{"PROJECT_TITLE":"Retinal tissue knockout to study efflux of cholesterol (AGCA1/G1 double KO)","PROJECT_TYPE":"MS analysis","PROJECT_SUMMARY":"ABCA1 and AGCG1, which is important gene to efflux the cholesterol from the cell/tissue, are knocked out in specific retinal tissue.","INSTITUTE":"Washington University in St Louis","DEPARTMENT":"Department of Ophthalmology and visual sicences","LABORATORY":"Apte Lab","LAST_NAME":"Ban","FIRST_NAME":"Norimitsu","ADDRESS":"660 S. Euclid Ave. Box 8118 St. Louis, MO 63110","EMAIL":"BanN@vision.wustl.edu","PHONE":"314-362-6690"},

"STUDY":{"STUDY_TITLE":"ARetinal tissue knockout to study efflux of cholesterol (AGCA1/G1 double KO - TY and LysM cre)","STUDY_TYPE":"MS analysis","STUDY_SUMMARY":"ABCA1 and AGCG1, which is important gene to efflux the cholesterol from the cell/tissue, are knocked out in specific retinal tissue. T:RPE specific, L:macrophage specific.","INSTITUTE":"University of Michigan","DEPARTMENT":"Biomedical Research Core Facilities","LABORATORY":"Metabolomics core","LAST_NAME":"Kachman","FIRST_NAME":"Maureen","ADDRESS":"6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714","EMAIL":"mkachman@med.umich.edu","PHONE":"(734) 232-8175","NUM_GROUPS":"5","TOTAL_SUBJECTS":"16"},

"SUBJECT":{"SUBJECT_TYPE":"Mouse","SUBJECT_SPECIES":"Mus musculus","TAXONOMY_ID":"10090"},
"SUBJECT_SAMPLE_FACTORS":[
{
"Subject ID":"SU0019504",
"Sample ID":"S00027103",
"Factors":{"CRE":"negative","SEX":"m"}
},
{
"Subject ID":"SU0019505",
"Sample ID":"S00027104",
"Factors":{"CRE":"negative","SEX":"f"}
},
{
"Subject ID":"SU0019506",
"Sample ID":"S00027105",
"Factors":{"CRE":"negative","SEX":"f"}
},
{
"Subject ID":"SU0019507",
"Sample ID":"S00027106",
"Factors":{"CRE":"negative","SEX":"m"}
},
{
"Subject ID":"SU0019508",
"Sample ID":"S00027107",
"Factors":{"CRE":"Tyrosinase Cre","SEX":"m"}
},
{
"Subject ID":"SU0019509",
"Sample ID":"S00027108",
"Factors":{"CRE":"Tyrosinase Cre","SEX":"f"}
},
{
"Subject ID":"SU0019510",
"Sample ID":"S00027109",
"Factors":{"CRE":"Tyrosinase Cre","SEX":"m"}
},
{
"Subject ID":"SU0019511",
"Sample ID":"S00027110",
"Factors":{"CRE":"Tyrosinase Cre","SEX":"m"}
},
{
"Subject ID":"SU0019512",
"Sample ID":"S00027111",
"Factors":{"CRE":"negative","SEX":"m"}
},
{
"Subject ID":"SU0019513",
"Sample ID":"S00027112",
"Factors":{"CRE":"negative","SEX":"m"}
},
{
"Subject ID":"SU0019514",
"Sample ID":"S00027113",
"Factors":{"CRE":"negative","SEX":"m"}
},
{
"Subject ID":"SU0019515",
"Sample ID":"S00027114",
"Factors":{"CRE":"negative","SEX":"f"}
},
{
"Subject ID":"SU0019516",
"Sample ID":"S00027115",
"Factors":{"CRE":"LysM Cre","SEX":"f"}
},
{
"Subject ID":"SU0019517",
"Sample ID":"S00027116",
"Factors":{"CRE":"LysM Cre","SEX":"f"}
},
{
"Subject ID":"SU0019518",
"Sample ID":"S00027117",
"Factors":{"CRE":"LysM Cre","SEX":"f"}
},
{
"Subject ID":"SU0019519",
"Sample ID":"S00027118",
"Factors":{"CRE":"LysM Cre","SEX":"f"}
}
],
"COLLECTION":{"COLLECTION_SUMMARY":"-"},

"TREATMENT":{"TREATMENT_SUMMARY":"-"},

"SAMPLEPREP":{"SAMPLEPREP_SUMMARY":"-","SAMPLEPREP_PROTOCOL_FILENAME":"A004 - Shotgun Lipidomics.pdf"},

"CHROMATOGRAPHY":{"CHROMATOGRAPHY_TYPE":"Reversed phase","INSTRUMENT_NAME":"ABI Sciex 5600+ TripleTOF","COLUMN_NAME":"Waters Acquity HSS T3 (50 x 2.1mm, 1.8um)"},

"ANALYSIS":{"ANALYSIS_TYPE":"MS","ANALYSIS_PROTOCOL_FILE":"A004 - Shotgun Lipidomics.pdf"},

"MS":{"MS_COMMENTS":"-","INSTRUMENT_NAME":"ABI Sciex 5600+ TripleTOF","INSTRUMENT_TYPE":"Triple TOF","MS_TYPE":"ESI","ION_MODE":"NEGATIVE"},

"MS_METABOLITE_DATA":{
"Units":"peak area normalized",

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}