{ "METABOLOMICS WORKBENCH":{"STUDY_ID":"ST000681","ANALYSIS_ID":"AN001049","VERSION":"1","CREATED_ON":"June 30, 2017, 11:37 am"}, "PROJECT":{"PROJECT_TITLE":"Retinal tissue knockout to study efflux of cholesterol (AGCA1/G1 double KO)","PROJECT_TYPE":"MS analysis","PROJECT_SUMMARY":"ABCA1 and AGCG1, which is important gene to efflux the cholesterol from the cell/tissue, are knocked out in specific retinal tissue.","INSTITUTE":"Washington University in St Louis","DEPARTMENT":"Department of Ophthalmology and visual sicences","LABORATORY":"Apte Lab","LAST_NAME":"Ban","FIRST_NAME":"Norimitsu","ADDRESS":"660 S. Euclid Ave. Box 8118 St. Louis, MO 63110","EMAIL":"BanN@vision.wustl.edu","PHONE":"314-362-6690"}, "STUDY":{"STUDY_TITLE":"ARetinal tissue knockout to study efflux of cholesterol (AGCA1/G1 double KO - TY and LysM cre)","STUDY_TYPE":"MS analysis","STUDY_SUMMARY":"ABCA1 and AGCG1, which is important gene to efflux the cholesterol from the cell/tissue, are knocked out in specific retinal tissue. T:RPE specific, L:macrophage specific.","INSTITUTE":"University of Michigan","DEPARTMENT":"Biomedical Research Core Facilities","LABORATORY":"Metabolomics core","LAST_NAME":"Kachman","FIRST_NAME":"Maureen","ADDRESS":"6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714","EMAIL":"mkachman@med.umich.edu","PHONE":"(734) 232-8175","NUM_GROUPS":"5","TOTAL_SUBJECTS":"16"}, "SUBJECT":{"SUBJECT_TYPE":"Mouse","SUBJECT_SPECIES":"Mus musculus","TAXONOMY_ID":"10090"}, "SUBJECT_SAMPLE_FACTORS":[ { "Subject ID":"SU0019504", "Sample ID":"S00027103", "Factors":{"CRE":"negative","SEX":"m"} }, { "Subject ID":"SU0019505", "Sample ID":"S00027104", "Factors":{"CRE":"negative","SEX":"f"} }, { "Subject ID":"SU0019506", "Sample ID":"S00027105", "Factors":{"CRE":"negative","SEX":"f"} }, { "Subject ID":"SU0019507", "Sample ID":"S00027106", "Factors":{"CRE":"negative","SEX":"m"} }, { "Subject ID":"SU0019508", "Sample ID":"S00027107", "Factors":{"CRE":"Tyrosinase Cre","SEX":"m"} }, { "Subject ID":"SU0019509", "Sample ID":"S00027108", "Factors":{"CRE":"Tyrosinase Cre","SEX":"f"} }, { "Subject ID":"SU0019510", "Sample ID":"S00027109", "Factors":{"CRE":"Tyrosinase Cre","SEX":"m"} }, { "Subject ID":"SU0019511", "Sample ID":"S00027110", "Factors":{"CRE":"Tyrosinase Cre","SEX":"m"} }, { "Subject ID":"SU0019512", "Sample ID":"S00027111", "Factors":{"CRE":"negative","SEX":"m"} }, { "Subject ID":"SU0019513", "Sample ID":"S00027112", "Factors":{"CRE":"negative","SEX":"m"} }, { "Subject ID":"SU0019514", "Sample ID":"S00027113", "Factors":{"CRE":"negative","SEX":"m"} }, { "Subject ID":"SU0019515", "Sample ID":"S00027114", "Factors":{"CRE":"negative","SEX":"f"} }, { "Subject ID":"SU0019516", "Sample ID":"S00027115", "Factors":{"CRE":"LysM Cre","SEX":"f"} }, { "Subject ID":"SU0019517", "Sample ID":"S00027116", "Factors":{"CRE":"LysM Cre","SEX":"f"} }, { "Subject ID":"SU0019518", "Sample ID":"S00027117", "Factors":{"CRE":"LysM Cre","SEX":"f"} }, { "Subject ID":"SU0019519", "Sample ID":"S00027118", "Factors":{"CRE":"LysM Cre","SEX":"f"} } ], "COLLECTION":{"COLLECTION_SUMMARY":"-"}, "TREATMENT":{"TREATMENT_SUMMARY":"-"}, "SAMPLEPREP":{"SAMPLEPREP_SUMMARY":"-","SAMPLEPREP_PROTOCOL_FILENAME":"A004 - Shotgun Lipidomics.pdf"}, "CHROMATOGRAPHY":{"CHROMATOGRAPHY_TYPE":"Reversed phase","INSTRUMENT_NAME":"ABI Sciex 5600+ TripleTOF","COLUMN_NAME":"Waters Acquity HSS T3 (50 x 2.1mm, 1.8um)"}, "ANALYSIS":{"ANALYSIS_TYPE":"MS","ANALYSIS_PROTOCOL_FILE":"A004 - Shotgun Lipidomics.pdf"}, "MS":{"MS_COMMENTS":"-","INSTRUMENT_NAME":"ABI Sciex 5600+ TripleTOF","INSTRUMENT_TYPE":"Triple TOF","MS_TYPE":"ESI","ION_MODE":"POSITIVE"}, "MS_METABOLITE_DATA":{ "Units":"peak area normalized", "Data":[{"Metabolite":"DG 32:0; 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