{
"METABOLOMICS WORKBENCH":{"STUDY_ID":"ST000707","ANALYSIS_ID":"AN001098","VERSION":"1","CREATED_ON":"July 2, 2017, 11:13 am"},

"PROJECT":{"PROJECT_TITLE":"Amino Acid Analysis of Hamsters treated with antibiotics","PROJECT_TYPE":"MS analysis","PROJECT_SUMMARY":"Amino Acid Analysis of Hamsters treated with antibiotics","INSTITUTE":"Kansas State University","DEPARTMENT":"Biology","LABORATORY":"Govind Lab","LAST_NAME":"Govind","FIRST_NAME":"Revathi","ADDRESS":"Manhattan, KS","EMAIL":"rgovind@ksu.edu","PHONE":"785-532-2816"},

"STUDY":{"STUDY_TITLE":"Amino Acid Analysis of hamster's gut contents","STUDY_TYPE":"MS analysis","STUDY_SUMMARY":"Hamsters were treated with Clindamycin, or a Saline, or nothing at all. After four days animals were sacrificed and their cecal contents were collected to record change in their Microbiome. Along with the Microbiome analysis we are also performing metabolomics analysis to understand the influence of change in the microbiome with the metabolic changes (if any). The cecal contents collected were frozen immediately (using liquid nitrogen) and was frozen in -80C until analysis.","INSTITUTE":"University of Michigan","DEPARTMENT":"Biomedical Research Core Facilities","LABORATORY":"Metabolomics core","LAST_NAME":"Kachman","FIRST_NAME":"Maureen","ADDRESS":"6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714","EMAIL":"mkachman@med.umich.edu","PHONE":"(734) 232-8175","NUM_GROUPS":"3","TOTAL_SUBJECTS":"20"},

"SUBJECT":{"SUBJECT_TYPE":"Animal","SUBJECT_SPECIES":"Mesocricetus auratus","TAXONOMY_ID":"10026"},
"SUBJECT_SAMPLE_FACTORS":[
{
"Subject ID":"SU0013396",
"Sample ID":"S00020057",
"Factors":{"Treatment":"Antibiotic treated"}
},
{
"Subject ID":"SU0013397",
"Sample ID":"S00020058",
"Factors":{"Treatment":"Antibiotic treated"}
},
{
"Subject ID":"SU0013398",
"Sample ID":"S00020059",
"Factors":{"Treatment":"Antibiotic treated"}
},
{
"Subject ID":"SU0013399",
"Sample ID":"S00020060",
"Factors":{"Treatment":"Antibiotic treated"}
},
{
"Subject ID":"SU0013400",
"Sample ID":"S00020061",
"Factors":{"Treatment":"Antibiotic treated"}
},
{
"Subject ID":"SU0013401",
"Sample ID":"S00020062",
"Factors":{"Treatment":"Antibiotic treated"}
},
{
"Subject ID":"SU0013402",
"Sample ID":"S00020063",
"Factors":{"Treatment":"Antibiotic treated"}
},
{
"Subject ID":"SU0013403",
"Sample ID":"S00020064",
"Factors":{"Treatment":"Saline treated"}
},
{
"Subject ID":"SU0013404",
"Sample ID":"S00020065",
"Factors":{"Treatment":"Saline treated"}
},
{
"Subject ID":"SU0013405",
"Sample ID":"S00020066",
"Factors":{"Treatment":"Saline treated"}
},
{
"Subject ID":"SU0013406",
"Sample ID":"S00020067",
"Factors":{"Treatment":"Saline treated"}
},
{
"Subject ID":"SU0013407",
"Sample ID":"S00020068",
"Factors":{"Treatment":"Saline treated"}
},
{
"Subject ID":"SU0013408",
"Sample ID":"S00020069",
"Factors":{"Treatment":"Saline treated"}
},
{
"Subject ID":"SU0013409",
"Sample ID":"S00020070",
"Factors":{"Treatment":"Saline treated"}
},
{
"Subject ID":"SU0013410",
"Sample ID":"S00020071",
"Factors":{"Treatment":"No treatment"}
},
{
"Subject ID":"SU0013411",
"Sample ID":"S00020072",
"Factors":{"Treatment":"No treatment"}
},
{
"Subject ID":"SU0013412",
"Sample ID":"S00020073",
"Factors":{"Treatment":"No treatment"}
},
{
"Subject ID":"SU0013413",
"Sample ID":"S00020074",
"Factors":{"Treatment":"No treatment"}
},
{
"Subject ID":"SU0013414",
"Sample ID":"S00020075",
"Factors":{"Treatment":"No treatment"}
},
{
"Subject ID":"SU0013415",
"Sample ID":"S00020076",
"Factors":{"Treatment":"No treatment"}
}
],
"COLLECTION":{"COLLECTION_SUMMARY":"-"},

"TREATMENT":{"TREATMENT_SUMMARY":"-"},

"SAMPLEPREP":{"SAMPLEPREP_SUMMARY":"-","SAMPLEPREP_PROTOCOL_FILENAME":"A005 - Amino Acids.pdf"},

"CHROMATOGRAPHY":{"CHROMATOGRAPHY_TYPE":"GC","INSTRUMENT_NAME":"Agilent 7890N","COLUMN_NAME":"Phenomenex Zebron ZB-AAA Amino Acid Analysis 10m x 0.25mm"},

"ANALYSIS":{"ANALYSIS_TYPE":"MS","ANALYSIS_PROTOCOL_FILE":"A005 - Amino Acids.pdf"},

"MS":{"MS_COMMENTS":"-","INSTRUMENT_NAME":"Agilent 5975","INSTRUMENT_TYPE":"Single quadrupole","MS_TYPE":"EI","ION_MODE":"POSITIVE"},

"MS_METABOLITE_DATA":{
"Units":"nmol/mg",

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}

}