{
"METABOLOMICS WORKBENCH":{"STUDY_ID":"ST000720","ANALYSIS_ID":"AN001126","VERSION":"1","CREATED_ON":"July 2, 2017, 9:17 pm"},

"PROJECT":{"PROJECT_TITLE":"Metabolomics of lean males given water, antibiotic cocktail (ANMV), or neomycin then exposed to ozone","PROJECT_TYPE":"MS analysis","PROJECT_SUMMARY":"Lean males given water, ANMV, or Neomycin then exposed to ozone","INSTITUTE":"Harvard School of Public Health","DEPARTMENT":"Environmental Health","LABORATORY":"Shore Lab","LAST_NAME":"Shore","FIRST_NAME":"Stephanie","ADDRESS":"Boston, MA","EMAIL":"sshore@hsph.harvard.edu","PHONE":"617-432-0199"},

"STUDY":{"STUDY_TITLE":"Metabolomics of lean males given water, antibiotic cocktail (ANMV), or neomycin then exposed to ozone","STUDY_TYPE":"MS analysis","STUDY_SUMMARY":"Mice were given either water, an antibiotic cocktail (ANMV), or Neomycin in their drinking water for two weeks to reduce bacterial load, and then exposed to air or to ozone (2ppm for 3hrs). 24 hours later, pulmonary mechanics and airway responsiveness was assessed, and blood was collected via cardiac puncture. Serum was isolated and immediately stored at -80 C for further analysis.","INSTITUTE":"University of Michigan","DEPARTMENT":"Biomedical Research Core Facilities","LABORATORY":"Metabolomics core","LAST_NAME":"Kachman","FIRST_NAME":"Maureen","ADDRESS":"6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714","EMAIL":"mkachman@med.umich.edu","PHONE":"(734) 232-8175","NUM_GROUPS":"7","TOTAL_SUBJECTS":"21"},

"SUBJECT":{"SUBJECT_TYPE":"MOUSE","SUBJECT_SPECIES":"Mus musculus","TAXONOMY_ID":"10090"},
"SUBJECT_SAMPLE_FACTORS":[
{
"Subject ID":"SU0016147",
"Sample ID":"S00025616",
"Factors":{"Treatment":"Water"},
"Additional sample data":{"Cohort":"1"}
},
{
"Subject ID":"SU0016148",
"Sample ID":"S00025617",
"Factors":{"Treatment":"Water"},
"Additional sample data":{"Cohort":"2"}
},
{
"Subject ID":"SU0016149",
"Sample ID":"S00025618",
"Factors":{"Treatment":"Water"},
"Additional sample data":{"Cohort":"2"}
},
{
"Subject ID":"SU0016150",
"Sample ID":"S00025619",
"Factors":{"Treatment":"Water"},
"Additional sample data":{"Cohort":"3"}
},
{
"Subject ID":"SU0016151",
"Sample ID":"S00025620",
"Factors":{"Treatment":"Water"},
"Additional sample data":{"Cohort":"3"}
},
{
"Subject ID":"SU0016152",
"Sample ID":"S00025621",
"Factors":{"Treatment":"Water"},
"Additional sample data":{"Cohort":"4"}
},
{
"Subject ID":"SU0016153",
"Sample ID":"S00025622",
"Factors":{"Treatment":"Water"},
"Additional sample data":{"Cohort":"4"}
},
{
"Subject ID":"SU0016154",
"Sample ID":"S00025623",
"Factors":{"Treatment":"ANMV"},
"Additional sample data":{"Cohort":"1"}
},
{
"Subject ID":"SU0016155",
"Sample ID":"S00025624",
"Factors":{"Treatment":"ANMV"},
"Additional sample data":{"Cohort":"2"}
},
{
"Subject ID":"SU0016156",
"Sample ID":"S00025625",
"Factors":{"Treatment":"ANMV"},
"Additional sample data":{"Cohort":"2"}
},
{
"Subject ID":"SU0016157",
"Sample ID":"S00025626",
"Factors":{"Treatment":"ANMV"},
"Additional sample data":{"Cohort":"3"}
},
{
"Subject ID":"SU0016158",
"Sample ID":"S00025627",
"Factors":{"Treatment":"ANMV"},
"Additional sample data":{"Cohort":"3"}
},
{
"Subject ID":"SU0016159",
"Sample ID":"S00025628",
"Factors":{"Treatment":"ANMV"},
"Additional sample data":{"Cohort":"4"}
},
{
"Subject ID":"SU0016160",
"Sample ID":"S00025629",
"Factors":{"Treatment":"ANMV"},
"Additional sample data":{"Cohort":"4"}
},
{
"Subject ID":"SU0016161",
"Sample ID":"S00025630",
"Factors":{"Treatment":"Neomycin"},
"Additional sample data":{"Cohort":"1"}
},
{
"Subject ID":"SU0016162",
"Sample ID":"S00025631",
"Factors":{"Treatment":"Neomycin"},
"Additional sample data":{"Cohort":"2"}
},
{
"Subject ID":"SU0016163",
"Sample ID":"S00025632",
"Factors":{"Treatment":"Neomycin"},
"Additional sample data":{"Cohort":"2"}
},
{
"Subject ID":"SU0016164",
"Sample ID":"S00025633",
"Factors":{"Treatment":"Neomycin"},
"Additional sample data":{"Cohort":"3"}
},
{
"Subject ID":"SU0016165",
"Sample ID":"S00025634",
"Factors":{"Treatment":"Neomycin"},
"Additional sample data":{"Cohort":"3"}
},
{
"Subject ID":"SU0016166",
"Sample ID":"S00025635",
"Factors":{"Treatment":"Neomycin"},
"Additional sample data":{"Cohort":"4"}
},
{
"Subject ID":"SU0016167",
"Sample ID":"S00025636",
"Factors":{"Treatment":"Neomycin"},
"Additional sample data":{"Cohort":"4"}
}
],
"COLLECTION":{"COLLECTION_SUMMARY":"-"},

"TREATMENT":{"TREATMENT_SUMMARY":"-"},

"SAMPLEPREP":{"SAMPLEPREP_SUMMARY":"-","SAMPLEPREP_PROTOCOL_FILENAME":"A007 - Short Chain Fatty Acids.pdf"},

"CHROMATOGRAPHY":{"CHROMATOGRAPHY_TYPE":"GC","INSTRUMENT_NAME":"Agilent 7890N","COLUMN_NAME":"Phenomenex Zebron ZB-WAXplus (30m x 0.25mm, 0.25um)"},

"ANALYSIS":{"ANALYSIS_TYPE":"MS","ANALYSIS_PROTOCOL_FILE":"A007 - Short Chain Fatty Acids.pdf"},

"MS":{"MS_COMMENTS":"-","INSTRUMENT_NAME":"Agilent 5975","INSTRUMENT_TYPE":"Single quadrupole","MS_TYPE":"EI","ION_MODE":"POSITIVE"},

"MS_METABOLITE_DATA":{
"Units":"uM",

"Data":[{"Metabolite":"PROPIONIC ACID","S00025616":"34.19802493","S00025617":"52.26048065","S00025618":"59.20719669","S00025619":"65.16459605","S00025620":"34.51212051","S00025621":"24.35942717","S00025622":"86.92269788","S00025623":"21.30964864","S00025624":"44.20589705","S00025625":"30.9969229","S00025626":"50.88284257","S00025627":"48.06608596","S00025628":"81.56522625","S00025629":"80.89935132","S00025630":"66.22338806","S00025631":"44.97385829","S00025632":"53.10204465","S00025633":"137.9593996","S00025634":"102.6086708","S00025635":"36.03352616","S00025636":"68.01840334"},{"Metabolite":"ISOVALERIC ACID","S00025616":"1.549015397","S00025617":"1.522928788","S00025618":"1.056618051","S00025619":".876536278","S00025620":".684561692","S00025621":".848699734","S00025622":".61099104","S00025623":".501369803","S00025624":".760111812","S00025625":".893235147","S00025626":".794637619","S00025627":".73162929","S00025628":".997391837","S00025629":".967067169","S00025630":".428276584","S00025631":".53947104","S00025632":".67302522","S00025633":"1.081856208","S00025634":".831021003","S00025635":".492868918","S00025636":".680015291"},{"Metabolite":"ACETIC ACID","S00025616":"2110.549115","S00025617":"2078.927762","S00025618":"1562.432904","S00025619":"2152.451466","S00025620":"1539.910783","S00025621":"1429.655909","S00025622":"2333.625739","S00025623":"801.6853318","S00025624":"1399.844114","S00025625":"1766.610735","S00025626":"1461.063531","S00025627":"2027.380497","S00025628":"1908.525318","S00025629":"2058.949472","S00025630":"1850.11486","S00025631":"1945.563355","S00025632":"1798.233536","S00025633":"1351.206933","S00025634":"2039.018323","S00025635":"1538.20407","S00025636":"1733.827257"},{"Metabolite":"BUTYRIC ACID","S00025616":"9.499711102","S00025617":"12.71661932","S00025618":"13.54224484","S00025619":"10.75327627","S00025620":"8.401511479","S00025621":"6.755326279","S00025622":"12.93920603","S00025623":"4.554853361","S00025624":"12.02883786","S00025625":"12.63006515","S00025626":"15.0135966","S00025627":"13.7280937","S00025628":"17.61114856","S00025629":"14.79065379","S00025630":"9.175146749","S00025631":"11.45496678","S00025632":"9.371044546","S00025633":"44.02573057","S00025634":"21.62897035","S00025635":"9.036313878","S00025636":"21.07306364"},{"Metabolite":"OCTANOIC ACID","S00025616":"2.270870247","S00025617":"1.396754597","S00025618":".992289851","S00025619":".851800276","S00025620":".807488284","S00025621":".934327182","S00025622":".664898037","S00025623":".207250023","S00025624":".510593475","S00025625":".948393898","S00025626":".912896903","S00025627":".543113417","S00025628":".570304906","S00025629":".92239027","S00025630":".614321275","S00025631":".588261026","S00025632":".4299749","S00025633":".320247408","S00025634":".446668178","S00025635":".374025645","S00025636":".329602102"},{"Metabolite":"VALERIC ACID","S00025616":"3.625566373","S00025617":"3.524023159","S00025618":"1.786532225","S00025619":"2.209372756","S00025620":"1.815986397","S00025621":"1.716555071","S00025622":"1.745227738","S00025623":"1.021659412","S00025624":"2.253051366","S00025625":"2.033234374","S00025626":"2.756037007","S00025627":"2.552439914","S00025628":"4.058230322","S00025629":"3.978441996","S00025630":"1.584951195","S00025631":"1.752199858","S00025632":"1.88312685","S00025633":"5.053776535","S00025634":"3.861441754","S00025635":"2.14257403","S00025636":"3.166373626"},{"Metabolite":"HEPTANOIC ACID","S00025616":"1.971387206","S00025617":"1.437753639","S00025618":"1.000900784","S00025619":".874639155","S00025620":".784464169","S00025621":".833573345","S00025622":".758969046","S00025623":".277760021","S00025624":".654999139","S00025625":"1.136917303","S00025626":"1.128242387","S00025627":".79155545","S00025628":".890857381","S00025629":".976907405","S00025630":".843268242","S00025631":".793870795","S00025632":".605943507","S00025633":".409752362","S00025634":".470513815","S00025635":".373383649","S00025636":".393266826"},{"Metabolite":"HEXANOIC ACID","S00025616":"5.14048166","S00025617":"4.900603838","S00025618":"3.530064696","S00025619":"3.985807844","S00025620":"3.626432293","S00025621":"4.27314549","S00025622":"4.94748331","S00025623":".916451144","S00025624":"4.133061664","S00025625":"7.321668479","S00025626":"7.298975871","S00025627":"5.350968836","S00025628":"4.758618206","S00025629":"5.367266932","S00025630":"2.487498711","S00025631":"4.354793239","S00025632":"2.578186272","S00025633":"2.367952929","S00025634":"4.09125656","S00025635":"2.189846357","S00025636":"2.351333776"}],

"Metabolites":[{"Metabolite":"PROPIONIC ACID","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"1032","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"ISOVALERIC ACID","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"10430","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"ACETIC ACID","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"176","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"BUTYRIC ACID","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"264","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"OCTANOIC ACID","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"379","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"VALERIC ACID","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"7991","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"HEPTANOIC ACID","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"8094","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"HEXANOIC ACID","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"8892","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""}]
}

}