{
"METABOLOMICS WORKBENCH":{"STUDY_ID":"ST001192","ANALYSIS_ID":"AN001984","VERSION":"1","CREATED_ON":"June 12, 2019, 10:02 pm"},

"PROJECT":{"PROJECT_TITLE":"A large library of gut bacterial isolates paired with longitudinal multiomics data enables mechanistic microbiome studies","PROJECT_TYPE":"Metabolite profiling of human stool from a healthy cohort","PROJECT_SUMMARY":"Here, we present the Broad Institute-OpenBiome Microbiome Library (BIO-ML), a comprehensive collection of 7,758 gut bacterial isolates with 3,632 paired genome sequences, and densely sampled multi-omic time series from many individual humans. Our longitudinal data reveal (1) that microbial species maintain stable population sizes within and across humans, (2) that commonly used ‘omic survey methods are more reliable when using averages over multiple days of sampling, (3) that variation of gut metabolites within people over time is driven by amino acid levels, while differences across people are driven by differences in bile acids, and (4) that functional evolution and genomic diversification can be used to infer eco-evolutionary dynamics and in vivo selection pressures for strains within individual people. The BIO-ML is a unique resource that will enable hypothesis-driven microbiome research and the rational design of microbial therapeutics.","INSTITUTE":"Broad Institute of MIT and Harvard","DEPARTMENT":"Metabolomics Platform","LAST_NAME":"Avila","FIRST_NAME":"Julian","ADDRESS":"415 Main Street, Rm 7175, Cambridge, MA, 02142, USA","EMAIL":"jravilap@broadinstitute.org","PHONE":"6177148264","CONTRIBUTORS":"Mathilde Poyet, Mathieu Groussin, Sean M Gibbons, Julian Avila-Pacheco, Xiaogang Jiang, Sean M Kearney, Allison R Perrotta, Shijie Zhao, Tammi Lieberman, P K Swanson, Mark Smith, Shane Roesemann, Jessica E Alexander, Scott A. Rich, Jonathan Livny, Hera Vlamakis, Clary Clish, Kevin Bullock, Amy Deik, Justin Scott, Kerry Pierce, Ramnik Xavier, Eric J Alm"},

"STUDY":{"STUDY_TITLE":"A library of human gut bacterial isolates paired with longitudinal multiomics data enables mechanistic microbiome research","STUDY_TYPE":"Stool metabolite profiling","STUDY_SUMMARY":"Fecal microbiota transplantation (FMT) is used in the treatment of microbiome-associated diseases such as Clostridium difficile infections. In order to develop synthetic therapeutics and customized disease treatments we will need to understand the bacterial communities in the stool samples used in such treatments. For this purpose, a microbiome library was generated using human stool obtained from healthy human FMT recruited by OpenBiome, a non-profit organization that provides fecal microbiome therapeutics. In addition to characterizing the bacterial populations and obtaining bacterial isolates from FMT samples, we conducted metabolite profiling with the goal of: (1) generating a library of metabolites in FMT samples, (2) Identifying metabolites associated with defined bacterial populations, and (3) identifying microbial metabolites with immunoregulatory functions. We conducted metabolite profiling on a subset consisting of 180 stool samples from 84 donors using four nontargeted liquid chromatography mass spectrometry (LC-MS) methods. Generated data were processed, isotopes removed, and adducts and fragments clustered. The identity of known metabolites was determined based on matching retention times of neat standards run in parallel with the study.","INSTITUTE":"Broad Institute of MIT and Harvard","LAST_NAME":"Avila","FIRST_NAME":"Julian","ADDRESS":"415 Main Street","EMAIL":"jravilap@broadinstitute.org","PHONE":"617-714-8264","TOTAL_SUBJECTS":"84"},

"SUBJECT":{"SUBJECT_TYPE":"Human","SUBJECT_SPECIES":"Homo sapiens","TAXONOMY_ID":"9606"},
"SUBJECT_SAMPLE_FACTORS":[
{
"Subject ID":"aa",
"Sample ID":"aa-0163",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0163","Age":"31","Sex":"M","Ht_in":"73","Wt_lbs":"188","BMI":"24.8","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"ab",
"Sample ID":"ab-0140",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0140","Age":"32","Sex":"M","Ht_in":"--","Wt_lbs":"--","BMI":"--","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"ac",
"Sample ID":"ac-0002",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0002","Age":"32","Sex":"F","Ht_in":"63","Wt_lbs":"114.4","BMI":"19.5","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"ad",
"Sample ID":"ad-0002",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0002","Age":"22","Sex":"M","Ht_in":"71","Wt_lbs":"155","BMI":"21.8","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"ad",
"Sample ID":"ad-0005",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0005","Age":"22","Sex":"M","Ht_in":"71","Wt_lbs":"155","BMI":"21.8","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"ae",
"Sample ID":"ae-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"22","Sex":"M","Ht_in":"73","Wt_lbs":"195","BMI":"26","WaistCirc_in":"--","Diet_notes":"Avoids some fruits"}
},
{
"Subject ID":"ae",
"Sample ID":"ae-0003",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0003","Age":"22","Sex":"M","Ht_in":"73","Wt_lbs":"195","BMI":"26","WaistCirc_in":"--","Diet_notes":"Avoids some fruits"}
},
{
"Subject ID":"ae",
"Sample ID":"ae-0007",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0007","Age":"22","Sex":"M","Ht_in":"73","Wt_lbs":"195","BMI":"26","WaistCirc_in":"--","Diet_notes":"Avoids some fruits"}
},
{
"Subject ID":"ae",
"Sample ID":"ae-0024",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0024","Age":"22","Sex":"M","Ht_in":"73","Wt_lbs":"195","BMI":"26","WaistCirc_in":"--","Diet_notes":"Avoids some fruits"}
},
{
"Subject ID":"ae",
"Sample ID":"ae-0069",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0069","Age":"22","Sex":"M","Ht_in":"73","Wt_lbs":"195","BMI":"26","WaistCirc_in":"--","Diet_notes":"Avoids some fruits"}
},
{
"Subject ID":"af",
"Sample ID":"af-0003",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0003","Age":"22","Sex":"M","Ht_in":"72","Wt_lbs":"175","BMI":"23.1","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"af",
"Sample ID":"af-0060",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0060","Age":"22","Sex":"M","Ht_in":"72","Wt_lbs":"175","BMI":"23.1","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"ag",
"Sample ID":"ag-0001",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0001","Age":"32","Sex":"M","Ht_in":"61","Wt_lbs":"208","BMI":"29.8","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"ag",
"Sample ID":"ag-0005",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0005","Age":"32","Sex":"M","Ht_in":"61","Wt_lbs":"208","BMI":"29.8","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"ah",
"Sample ID":"ah-0002",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0002","Age":"44","Sex":"M","Ht_in":"61","Wt_lbs":"195","BMI":"28.3","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"ah",
"Sample ID":"ah-0028",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0028","Age":"44","Sex":"M","Ht_in":"61","Wt_lbs":"195","BMI":"28.3","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"ai",
"Sample ID":"ai-0002",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0002","Age":"20","Sex":"M","Ht_in":"71","Wt_lbs":"150","BMI":"22.1","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"aj",
"Sample ID":"aj-0001",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0001","Age":"33","Sex":"M","Ht_in":"61","Wt_lbs":"190","BMI":"29.1","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"ak",
"Sample ID":"ak-0001",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0001","Age":"22","Sex":"F","Ht_in":"64","Wt_lbs":"113","BMI":"19.8","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"ak",
"Sample ID":"ak-0010",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0010","Age":"22","Sex":"F","Ht_in":"64","Wt_lbs":"113","BMI":"19.8","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"al",
"Sample ID":"al-0002",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0002","Age":"25","Sex":"M","Ht_in":"73","Wt_lbs":"185","BMI":"24.4","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"am",
"Sample ID":"am-0001",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0001","Age":"28","Sex":"M","Ht_in":"71","Wt_lbs":"174.2","BMI":"23","WaistCirc_in":"35","Diet_notes":"leans toward vegetarian"}
},
{
"Subject ID":"am",
"Sample ID":"am-0003",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0003","Age":"28","Sex":"M","Ht_in":"71","Wt_lbs":"174.2","BMI":"23","WaistCirc_in":"35","Diet_notes":"leans toward vegetarian"}
},
{
"Subject ID":"am",
"Sample ID":"am-0006",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0006","Age":"28","Sex":"M","Ht_in":"71","Wt_lbs":"174.2","BMI":"23","WaistCirc_in":"35","Diet_notes":"leans toward vegetarian"}
},
{
"Subject ID":"am",
"Sample ID":"am-0014",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0014","Age":"28","Sex":"M","Ht_in":"71","Wt_lbs":"174.2","BMI":"23","WaistCirc_in":"35","Diet_notes":"leans toward vegetarian"}
},
{
"Subject ID":"am",
"Sample ID":"am-0025",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0025","Age":"28","Sex":"M","Ht_in":"71","Wt_lbs":"174.2","BMI":"23","WaistCirc_in":"35","Diet_notes":"leans toward vegetarian"}
},
{
"Subject ID":"am",
"Sample ID":"am-0052",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0052","Age":"28","Sex":"M","Ht_in":"71","Wt_lbs":"174.2","BMI":"23","WaistCirc_in":"35","Diet_notes":"leans toward vegetarian"}
},
{
"Subject ID":"am",
"Sample ID":"am-0070",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0070","Age":"28","Sex":"M","Ht_in":"71","Wt_lbs":"174.2","BMI":"23","WaistCirc_in":"35","Diet_notes":"leans toward vegetarian"}
},
{
"Subject ID":"am",
"Sample ID":"am-0111",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0111","Age":"28","Sex":"M","Ht_in":"71","Wt_lbs":"174.2","BMI":"23","WaistCirc_in":"35","Diet_notes":"leans toward vegetarian"}
},
{
"Subject ID":"am",
"Sample ID":"am-0224",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0224","Age":"28","Sex":"M","Ht_in":"71","Wt_lbs":"174.2","BMI":"23","WaistCirc_in":"35","Diet_notes":"leans toward vegetarian"}
},
{
"Subject ID":"an",
"Sample ID":"an-0001",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0001","Age":"23","Sex":"F","Ht_in":"71","Wt_lbs":"131.6","BMI":"21.4","WaistCirc_in":"30","Diet_notes":"-"}
},
{
"Subject ID":"an",
"Sample ID":"an-0002",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0002","Age":"23","Sex":"F","Ht_in":"71","Wt_lbs":"131.6","BMI":"21.4","WaistCirc_in":"30","Diet_notes":"-"}
},
{
"Subject ID":"an",
"Sample ID":"an-0004",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0004","Age":"23","Sex":"F","Ht_in":"71","Wt_lbs":"131.6","BMI":"21.4","WaistCirc_in":"30","Diet_notes":"-"}
},
{
"Subject ID":"an",
"Sample ID":"an-0013",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0013","Age":"23","Sex":"F","Ht_in":"71","Wt_lbs":"131.6","BMI":"21.4","WaistCirc_in":"30","Diet_notes":"-"}
},
{
"Subject ID":"an",
"Sample ID":"an-0025",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0025","Age":"23","Sex":"F","Ht_in":"71","Wt_lbs":"131.6","BMI":"21.4","WaistCirc_in":"30","Diet_notes":"-"}
},
{
"Subject ID":"an",
"Sample ID":"an-0030",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0030","Age":"23","Sex":"F","Ht_in":"71","Wt_lbs":"131.6","BMI":"21.4","WaistCirc_in":"30","Diet_notes":"-"}
},
{
"Subject ID":"an",
"Sample ID":"an-0082",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0082","Age":"23","Sex":"F","Ht_in":"71","Wt_lbs":"131.6","BMI":"21.4","WaistCirc_in":"30","Diet_notes":"-"}
},
{
"Subject ID":"ao",
"Sample ID":"ao-0001",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0001","Age":"37","Sex":"M","Ht_in":"61","Wt_lbs":"190.6","BMI":"26.2","WaistCirc_in":"33.8","Diet_notes":"-"}
},
{
"Subject ID":"ao",
"Sample ID":"ao-0004",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0004","Age":"37","Sex":"M","Ht_in":"61","Wt_lbs":"190.6","BMI":"26.2","WaistCirc_in":"33.8","Diet_notes":"-"}
},
{
"Subject ID":"ao",
"Sample ID":"ao-0025",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0025","Age":"37","Sex":"M","Ht_in":"61","Wt_lbs":"190.6","BMI":"26.2","WaistCirc_in":"33.8","Diet_notes":"-"}
},
{
"Subject ID":"ao",
"Sample ID":"ao-0049",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0049","Age":"37","Sex":"M","Ht_in":"61","Wt_lbs":"190.6","BMI":"26.2","WaistCirc_in":"33.8","Diet_notes":"-"}
},
{
"Subject ID":"ao",
"Sample ID":"ao-0085",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0085","Age":"37","Sex":"M","Ht_in":"61","Wt_lbs":"190.6","BMI":"26.2","WaistCirc_in":"33.8","Diet_notes":"-"}
},
{
"Subject ID":"ao",
"Sample ID":"ao-0090",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0090","Age":"37","Sex":"M","Ht_in":"61","Wt_lbs":"190.6","BMI":"26.2","WaistCirc_in":"33.8","Diet_notes":"-"}
},
{
"Subject ID":"ap",
"Sample ID":"ap-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"31","Sex":"F","Ht_in":"64","Wt_lbs":"114.6","BMI":"21","WaistCirc_in":"26.5","Diet_notes":"-"}
},
{
"Subject ID":"ap",
"Sample ID":"ap-0037",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0037","Age":"31","Sex":"F","Ht_in":"64","Wt_lbs":"114.6","BMI":"21","WaistCirc_in":"26.5","Diet_notes":"-"}
},
{
"Subject ID":"aq",
"Sample ID":"aq-0004",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0004","Age":"24","Sex":"F","Ht_in":"64","Wt_lbs":"145","BMI":"22.5","WaistCirc_in":"28.2","Diet_notes":"vegetarian (eats fish and eggs)"}
},
{
"Subject ID":"aq",
"Sample ID":"aq-0015",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0015","Age":"24","Sex":"F","Ht_in":"64","Wt_lbs":"145","BMI":"22.5","WaistCirc_in":"28.2","Diet_notes":"vegetarian (eats fish and eggs)"}
},
{
"Subject ID":"ar",
"Sample ID":"ar-0039",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0039","Age":"25","Sex":"F","Ht_in":"71","Wt_lbs":"148","BMI":"21.9","WaistCirc_in":"33.5","Diet_notes":"-"}
},
{
"Subject ID":"as",
"Sample ID":"as-0033",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0033","Age":"28","Sex":"M","Ht_in":"71","Wt_lbs":"168.2","BMI":"26.4","WaistCirc_in":"36.6","Diet_notes":"-"}
},
{
"Subject ID":"at",
"Sample ID":"at-0004",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0004","Age":"24","Sex":"F","Ht_in":"62","Wt_lbs":"114","BMI":"20.9","WaistCirc_in":"27.2","Diet_notes":"-"}
},
{
"Subject ID":"at",
"Sample ID":"at-0044",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0044","Age":"24","Sex":"F","Ht_in":"62","Wt_lbs":"114","BMI":"20.9","WaistCirc_in":"27.2","Diet_notes":"-"}
},
{
"Subject ID":"au",
"Sample ID":"au-0002",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0002","Age":"22","Sex":"M","Ht_in":"75","Wt_lbs":"157.6","BMI":"20.1","WaistCirc_in":"31","Diet_notes":"-"}
},
{
"Subject ID":"av",
"Sample ID":"av-0006",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0006","Age":"27","Sex":"F","Ht_in":"71","Wt_lbs":"130.6","BMI":"21.2","WaistCirc_in":"31","Diet_notes":"-"}
},
{
"Subject ID":"av",
"Sample ID":"av-0107",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0107","Age":"27","Sex":"F","Ht_in":"71","Wt_lbs":"130.6","BMI":"21.2","WaistCirc_in":"31","Diet_notes":"-"}
},
{
"Subject ID":"aw",
"Sample ID":"aw-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"26","Sex":"F","Ht_in":"71","Wt_lbs":"140","BMI":"23.3","WaistCirc_in":"28.7","Diet_notes":"-"}
},
{
"Subject ID":"aw",
"Sample ID":"aw-0036",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0036","Age":"26","Sex":"F","Ht_in":"71","Wt_lbs":"140","BMI":"23.3","WaistCirc_in":"28.7","Diet_notes":"-"}
},
{
"Subject ID":"ax",
"Sample ID":"ax-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"43","Sex":"M","Ht_in":"69","Wt_lbs":"182.2","BMI":"27.3","WaistCirc_in":"35","Diet_notes":"on/off Paleo diet in summer"}
},
{
"Subject ID":"ax",
"Sample ID":"ax-0090",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0090","Age":"43","Sex":"M","Ht_in":"69","Wt_lbs":"182.2","BMI":"27.3","WaistCirc_in":"35","Diet_notes":"on/off Paleo diet in summer"}
},
{
"Subject ID":"ay",
"Sample ID":"ay-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"35","Sex":"M","Ht_in":"71","Wt_lbs":"169.2","BMI":"25.7","WaistCirc_in":"35","Diet_notes":"-"}
},
{
"Subject ID":"az",
"Sample ID":"az-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"26","Sex":"F","Ht_in":"65","Wt_lbs":"144.6","BMI":"24.5","WaistCirc_in":"32.5","Diet_notes":"avoids dairy"}
},
{
"Subject ID":"ba",
"Sample ID":"ba-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"20","Sex":"M","Ht_in":"73","Wt_lbs":"159.6","BMI":"20.9","WaistCirc_in":"33.5","Diet_notes":"-"}
},
{
"Subject ID":"ba",
"Sample ID":"ba-0003",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0003","Age":"20","Sex":"M","Ht_in":"73","Wt_lbs":"159.6","BMI":"20.9","WaistCirc_in":"33.5","Diet_notes":"-"}
},
{
"Subject ID":"ba",
"Sample ID":"ba-0010",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0010","Age":"20","Sex":"M","Ht_in":"73","Wt_lbs":"159.6","BMI":"20.9","WaistCirc_in":"33.5","Diet_notes":"-"}
},
{
"Subject ID":"ba",
"Sample ID":"ba-0018",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0018","Age":"20","Sex":"M","Ht_in":"73","Wt_lbs":"159.6","BMI":"20.9","WaistCirc_in":"33.5","Diet_notes":"-"}
},
{
"Subject ID":"ba",
"Sample ID":"ba-0025",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0025","Age":"20","Sex":"M","Ht_in":"73","Wt_lbs":"159.6","BMI":"20.9","WaistCirc_in":"33.5","Diet_notes":"-"}
},
{
"Subject ID":"ba",
"Sample ID":"ba-0066",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0066","Age":"20","Sex":"M","Ht_in":"73","Wt_lbs":"159.6","BMI":"20.9","WaistCirc_in":"33.5","Diet_notes":"-"}
},
{
"Subject ID":"ba",
"Sample ID":"ba-0113",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0113","Age":"20","Sex":"M","Ht_in":"73","Wt_lbs":"159.6","BMI":"20.9","WaistCirc_in":"33.5","Diet_notes":"-"}
},
{
"Subject ID":"bc",
"Sample ID":"bc-0002",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0002","Age":"27","Sex":"F","Ht_in":"62","Wt_lbs":"117.4","BMI":"21.3","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"bc",
"Sample ID":"bc-0003",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0003","Age":"27","Sex":"F","Ht_in":"62","Wt_lbs":"117.4","BMI":"21.3","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"bc",
"Sample ID":"bc-0013",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0013","Age":"27","Sex":"F","Ht_in":"62","Wt_lbs":"117.4","BMI":"21.3","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"bc",
"Sample ID":"bc-0018",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0018","Age":"27","Sex":"F","Ht_in":"62","Wt_lbs":"117.4","BMI":"21.3","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"bc",
"Sample ID":"bc-0029",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0029","Age":"27","Sex":"F","Ht_in":"62","Wt_lbs":"117.4","BMI":"21.3","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"bc",
"Sample ID":"bc-0042",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0042","Age":"27","Sex":"F","Ht_in":"62","Wt_lbs":"117.4","BMI":"21.3","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"bc",
"Sample ID":"bc-0068",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0068","Age":"27","Sex":"F","Ht_in":"62","Wt_lbs":"117.4","BMI":"21.3","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"bc",
"Sample ID":"bc-0105",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0105","Age":"27","Sex":"F","Ht_in":"62","Wt_lbs":"117.4","BMI":"21.3","WaistCirc_in":"--","Diet_notes":"-"}
},
{
"Subject ID":"bd",
"Sample ID":"bd-0033",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0033","Age":"33","Sex":"M","Ht_in":"61","Wt_lbs":"177.2","BMI":"24.9","WaistCirc_in":"35.1","Diet_notes":"occ eats fish, dairy"}
},
{
"Subject ID":"be",
"Sample ID":"be-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"24","Sex":"M","Ht_in":"74","Wt_lbs":"180.4","BMI":"23.5","WaistCirc_in":"35","Diet_notes":"avoids dairy"}
},
{
"Subject ID":"bf",
"Sample ID":"bf-0003",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0003","Age":"27","Sex":"M","Ht_in":"67","Wt_lbs":"184.6","BMI":"28.1","WaistCirc_in":"36","Diet_notes":"-"}
},
{
"Subject ID":"bf",
"Sample ID":"bf-0108",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0108","Age":"27","Sex":"M","Ht_in":"67","Wt_lbs":"184.6","BMI":"28.1","WaistCirc_in":"36","Diet_notes":"-"}
},
{
"Subject ID":"bh",
"Sample ID":"bh-0001",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0001","Age":"33","Sex":"F","Ht_in":"66","Wt_lbs":"126.8","BMI":"20.4","WaistCirc_in":"36","Diet_notes":"avoids dairy and bread"}
},
{
"Subject ID":"bh",
"Sample ID":"bh-0003",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0003","Age":"33","Sex":"F","Ht_in":"66","Wt_lbs":"126.8","BMI":"20.4","WaistCirc_in":"36","Diet_notes":"avoids dairy and bread"}
},
{
"Subject ID":"bh",
"Sample ID":"bh-0012",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0012","Age":"33","Sex":"F","Ht_in":"66","Wt_lbs":"126.8","BMI":"20.4","WaistCirc_in":"36","Diet_notes":"avoids dairy and bread"}
},
{
"Subject ID":"bh",
"Sample ID":"bh-0025",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0025","Age":"33","Sex":"F","Ht_in":"66","Wt_lbs":"126.8","BMI":"20.4","WaistCirc_in":"36","Diet_notes":"avoids dairy and bread"}
},
{
"Subject ID":"bh",
"Sample ID":"bh-0050",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0050","Age":"33","Sex":"F","Ht_in":"66","Wt_lbs":"126.8","BMI":"20.4","WaistCirc_in":"36","Diet_notes":"avoids dairy and bread"}
},
{
"Subject ID":"bh",
"Sample ID":"bh-0066",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0066","Age":"33","Sex":"F","Ht_in":"66","Wt_lbs":"126.8","BMI":"20.4","WaistCirc_in":"36","Diet_notes":"avoids dairy and bread"}
},
{
"Subject ID":"bh",
"Sample ID":"bh-0087",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0087","Age":"33","Sex":"F","Ht_in":"66","Wt_lbs":"126.8","BMI":"20.4","WaistCirc_in":"36","Diet_notes":"avoids dairy and bread"}
},
{
"Subject ID":"bh",
"Sample ID":"bh-0123",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0123","Age":"33","Sex":"F","Ht_in":"66","Wt_lbs":"126.8","BMI":"20.4","WaistCirc_in":"36","Diet_notes":"avoids dairy and bread"}
},
{
"Subject ID":"bi",
"Sample ID":"bi-0001",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0001","Age":"24","Sex":"M","Ht_in":"61","Wt_lbs":"146","BMI":"21.6","WaistCirc_in":"31.4","Diet_notes":"-"}
},
{
"Subject ID":"bi",
"Sample ID":"bi-0026",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0026","Age":"24","Sex":"M","Ht_in":"61","Wt_lbs":"146","BMI":"21.6","WaistCirc_in":"31.4","Diet_notes":"-"}
},
{
"Subject ID":"bj",
"Sample ID":"bj-0001",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0001","Age":"26","Sex":"M","Ht_in":"71","Wt_lbs":"181.6","BMI":"27","WaistCirc_in":"33.5","Diet_notes":"-"}
},
{
"Subject ID":"bj",
"Sample ID":"bj-0004",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0004","Age":"26","Sex":"M","Ht_in":"71","Wt_lbs":"181.6","BMI":"27","WaistCirc_in":"33.5","Diet_notes":"-"}
},
{
"Subject ID":"bj",
"Sample ID":"bj-0014",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0014","Age":"26","Sex":"M","Ht_in":"71","Wt_lbs":"181.6","BMI":"27","WaistCirc_in":"33.5","Diet_notes":"-"}
},
{
"Subject ID":"bj",
"Sample ID":"bj-0032",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0032","Age":"26","Sex":"M","Ht_in":"71","Wt_lbs":"181.6","BMI":"27","WaistCirc_in":"33.5","Diet_notes":"-"}
},
{
"Subject ID":"bj",
"Sample ID":"bj-0056",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0056","Age":"26","Sex":"M","Ht_in":"71","Wt_lbs":"181.6","BMI":"27","WaistCirc_in":"33.5","Diet_notes":"-"}
},
{
"Subject ID":"bj",
"Sample ID":"bj-0095",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0095","Age":"26","Sex":"M","Ht_in":"71","Wt_lbs":"181.6","BMI":"27","WaistCirc_in":"33.5","Diet_notes":"-"}
},
{
"Subject ID":"bj",
"Sample ID":"bj-0110",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0110","Age":"26","Sex":"M","Ht_in":"71","Wt_lbs":"181.6","BMI":"27","WaistCirc_in":"33.5","Diet_notes":"-"}
},
{
"Subject ID":"bk",
"Sample ID":"bk-0002",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0002","Age":"25","Sex":"F","Ht_in":"67","Wt_lbs":"115","BMI":"17.5","WaistCirc_in":"31","Diet_notes":"-"}
},
{
"Subject ID":"bl",
"Sample ID":"bl-0009",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0009","Age":"29","Sex":"M","Ht_in":"71","Wt_lbs":"157.2","BMI":"23.6","WaistCirc_in":"33","Diet_notes":"-"}
},
{
"Subject ID":"bm",
"Sample ID":"bm-0002",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0002","Age":"29","Sex":"M","Ht_in":"70","Wt_lbs":"165.6","BMI":"23.7","WaistCirc_in":"35","Diet_notes":"-"}
},
{
"Subject ID":"bm",
"Sample ID":"bm-0013",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0013","Age":"29","Sex":"M","Ht_in":"70","Wt_lbs":"165.6","BMI":"23.7","WaistCirc_in":"35","Diet_notes":"-"}
},
{
"Subject ID":"bn",
"Sample ID":"bn-0002",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0002","Age":"29","Sex":"F","Ht_in":"63","Wt_lbs":"119.6","BMI":"20.3","WaistCirc_in":"31","Diet_notes":"-"}
},
{
"Subject ID":"bn",
"Sample ID":"bn-0038",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0038","Age":"29","Sex":"F","Ht_in":"63","Wt_lbs":"119.6","BMI":"20.3","WaistCirc_in":"31","Diet_notes":"-"}
},
{
"Subject ID":"bo",
"Sample ID":"bo-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"36","Sex":"M","Ht_in":"74","Wt_lbs":"174.8","BMI":"22.2","WaistCirc_in":"34","Diet_notes":"-"}
},
{
"Subject ID":"bo",
"Sample ID":"bo-0122",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0122","Age":"36","Sex":"M","Ht_in":"74","Wt_lbs":"174.8","BMI":"22.2","WaistCirc_in":"34","Diet_notes":"-"}
},
{
"Subject ID":"bp",
"Sample ID":"bp-0002",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0002","Age":"28","Sex":"M","Ht_in":"71","Wt_lbs":"137.6","BMI":"19.7","WaistCirc_in":"30.5","Diet_notes":"-"}
},
{
"Subject ID":"bq",
"Sample ID":"bq-0002",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0002","Age":"26","Sex":"M","Ht_in":"73","Wt_lbs":"190","BMI":"24.9","WaistCirc_in":"35","Diet_notes":"-"}
},
{
"Subject ID":"bq",
"Sample ID":"bq-0068",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0068","Age":"26","Sex":"M","Ht_in":"73","Wt_lbs":"190","BMI":"24.9","WaistCirc_in":"35","Diet_notes":"-"}
},
{
"Subject ID":"br",
"Sample ID":"br-0002",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0002","Age":"25","Sex":"M","Ht_in":"71","Wt_lbs":"145","BMI":"22","WaistCirc_in":"30","Diet_notes":"-"}
},
{
"Subject ID":"bs",
"Sample ID":"bs-0008",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0008","Age":"32","Sex":"M","Ht_in":"75","Wt_lbs":"188","BMI":"23.4","WaistCirc_in":"33","Diet_notes":"-"}
},
{
"Subject ID":"bt",
"Sample ID":"bt-0001",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0001","Age":"30","Sex":"M","Ht_in":"71","Wt_lbs":"162","BMI":"24.7","WaistCirc_in":"35.5","Diet_notes":"-"}
},
{
"Subject ID":"bt",
"Sample ID":"bt-0039",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0039","Age":"30","Sex":"M","Ht_in":"71","Wt_lbs":"162","BMI":"24.7","WaistCirc_in":"35.5","Diet_notes":"-"}
},
{
"Subject ID":"bu",
"Sample ID":"bu-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"21","Sex":"M","Ht_in":"71","Wt_lbs":"139","BMI":"20.5","WaistCirc_in":"30","Diet_notes":"Avoids processed foods"}
},
{
"Subject ID":"bu",
"Sample ID":"bu-0080",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0080","Age":"21","Sex":"M","Ht_in":"71","Wt_lbs":"139","BMI":"20.5","WaistCirc_in":"30","Diet_notes":"Avoids processed foods"}
},
{
"Subject ID":"bv",
"Sample ID":"bv-0001",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0001","Age":"29","Sex":"M","Ht_in":"71","Wt_lbs":"179.6","BMI":"26.9","WaistCirc_in":"36.5","Diet_notes":"-"}
},
{
"Subject ID":"bw",
"Sample ID":"bw-0001",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0001","Age":"26","Sex":"M","Ht_in":"61","Wt_lbs":"151.4","BMI":"21.4","WaistCirc_in":"30.5","Diet_notes":"-"}
},
{
"Subject ID":"bw",
"Sample ID":"bw-0033",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0033","Age":"26","Sex":"M","Ht_in":"61","Wt_lbs":"151.4","BMI":"21.4","WaistCirc_in":"30.5","Diet_notes":"-"}
},
{
"Subject ID":"bx",
"Sample ID":"bx-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"23","Sex":"M","Ht_in":"72","Wt_lbs":"164.2","BMI":"22.4","WaistCirc_in":"33","Diet_notes":"-"}
},
{
"Subject ID":"bx",
"Sample ID":"bx-0057",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0057","Age":"23","Sex":"M","Ht_in":"72","Wt_lbs":"164.2","BMI":"22.4","WaistCirc_in":"33","Diet_notes":"-"}
},
{
"Subject ID":"by",
"Sample ID":"by-0002",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0002","Age":"24","Sex":"M","Ht_in":"71","Wt_lbs":"167.6","BMI":"24.3","WaistCirc_in":"35","Diet_notes":"-"}
},
{
"Subject ID":"bz",
"Sample ID":"bz-0033",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0033","Age":"22","Sex":"M","Ht_in":"65","Wt_lbs":"136.6","BMI":"22.3","WaistCirc_in":"32.4","Diet_notes":"-"}
},
{
"Subject ID":"ca",
"Sample ID":"ca-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"22","Sex":"M","Ht_in":"71","Wt_lbs":"172","BMI":"25.5","WaistCirc_in":"34","Diet_notes":"-"}
},
{
"Subject ID":"ca",
"Sample ID":"ca-0012",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0012","Age":"22","Sex":"M","Ht_in":"71","Wt_lbs":"172","BMI":"25.5","WaistCirc_in":"34","Diet_notes":"-"}
},
{
"Subject ID":"cb",
"Sample ID":"cb-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"19","Sex":"M","Ht_in":"61","Wt_lbs":"143.6","BMI":"20.3","WaistCirc_in":"30.5","Diet_notes":"-"}
},
{
"Subject ID":"cb",
"Sample ID":"cb-0051",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0051","Age":"19","Sex":"M","Ht_in":"61","Wt_lbs":"143.6","BMI":"20.3","WaistCirc_in":"30.5","Diet_notes":"-"}
},
{
"Subject ID":"cc",
"Sample ID":"cc-0002",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0002","Age":"26","Sex":"M","Ht_in":"71","Wt_lbs":"160","BMI":"23.7","WaistCirc_in":"34","Diet_notes":"-"}
},
{
"Subject ID":"cd",
"Sample ID":"cd-0050",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0050","Age":"34","Sex":"M","Ht_in":"69","Wt_lbs":"165.2","BMI":"23.9","WaistCirc_in":"35","Diet_notes":"-"}
},
{
"Subject ID":"ce",
"Sample ID":"ce-0001",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0001","Age":"32","Sex":"M","Ht_in":"71","Wt_lbs":"132.4","BMI":"21.4","WaistCirc_in":"31.5","Diet_notes":"-"}
},
{
"Subject ID":"ce",
"Sample ID":"ce-0007",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0007","Age":"32","Sex":"M","Ht_in":"71","Wt_lbs":"132.4","BMI":"21.4","WaistCirc_in":"31.5","Diet_notes":"-"}
},
{
"Subject ID":"cf",
"Sample ID":"cf-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"26","Sex":"M","Ht_in":"72","Wt_lbs":"207.2","BMI":"27.5","WaistCirc_in":"35","Diet_notes":"-"}
},
{
"Subject ID":"cf",
"Sample ID":"cf-0037",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0037","Age":"26","Sex":"M","Ht_in":"72","Wt_lbs":"207.2","BMI":"27.5","WaistCirc_in":"35","Diet_notes":"-"}
},
{
"Subject ID":"cg",
"Sample ID":"cg-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"29","Sex":"M","Ht_in":"73","Wt_lbs":"187","BMI":"24.6","WaistCirc_in":"34","Diet_notes":"-"}
},
{
"Subject ID":"ch",
"Sample ID":"ch-0008",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0008","Age":"24","Sex":"M","Ht_in":"67","Wt_lbs":"173.8","BMI":"27","WaistCirc_in":"32.5","Diet_notes":"-"}
},
{
"Subject ID":"cj",
"Sample ID":"cj-0004",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0004","Age":"35","Sex":"M","Ht_in":"70","Wt_lbs":"170","BMI":"24.4","WaistCirc_in":"35.5","Diet_notes":"-"}
},
{
"Subject ID":"cl",
"Sample ID":"cl-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"29","Sex":"M","Ht_in":"70","Wt_lbs":"156","BMI":"22","WaistCirc_in":"31","Diet_notes":"Doesn't eat a lot of meat"}
},
{
"Subject ID":"cl",
"Sample ID":"cl-0004",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0004","Age":"29","Sex":"M","Ht_in":"70","Wt_lbs":"156","BMI":"22","WaistCirc_in":"31","Diet_notes":"Doesn't eat a lot of meat"}
},
{
"Subject ID":"cl",
"Sample ID":"cl-0018",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0018","Age":"29","Sex":"M","Ht_in":"70","Wt_lbs":"156","BMI":"22","WaistCirc_in":"31","Diet_notes":"Doesn't eat a lot of meat"}
},
{
"Subject ID":"cl",
"Sample ID":"cl-0068",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0068","Age":"29","Sex":"M","Ht_in":"70","Wt_lbs":"156","BMI":"22","WaistCirc_in":"31","Diet_notes":"Doesn't eat a lot of meat"}
},
{
"Subject ID":"cl",
"Sample ID":"cl-0134",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0134","Age":"29","Sex":"M","Ht_in":"70","Wt_lbs":"156","BMI":"22","WaistCirc_in":"31","Diet_notes":"Doesn't eat a lot of meat"}
},
{
"Subject ID":"cm",
"Sample ID":"cm-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"22","Sex":"M","Ht_in":"72","Wt_lbs":"181.6","BMI":"24.1","WaistCirc_in":"31.5","Diet_notes":"-"}
},
{
"Subject ID":"cm",
"Sample ID":"cm-0022",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0022","Age":"22","Sex":"M","Ht_in":"72","Wt_lbs":"181.6","BMI":"24.1","WaistCirc_in":"31.5","Diet_notes":"-"}
},
{
"Subject ID":"cn",
"Sample ID":"cn-0002",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0002","Age":"34","Sex":"F","Ht_in":"68","Wt_lbs":"157","BMI":"23.6","WaistCirc_in":"33","Diet_notes":"-"}
},
{
"Subject ID":"cp",
"Sample ID":"cp-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"26","Sex":"M","Ht_in":"74","Wt_lbs":"182.6","BMI":"23.2","WaistCirc_in":"33.5","Diet_notes":"-"}
},
{
"Subject ID":"cp",
"Sample ID":"cp-0009",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0009","Age":"26","Sex":"M","Ht_in":"74","Wt_lbs":"182.6","BMI":"23.2","WaistCirc_in":"33.5","Diet_notes":"-"}
},
{
"Subject ID":"cq",
"Sample ID":"cq-0035",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0035","Age":"27","Sex":"F","Ht_in":"66","Wt_lbs":"137","BMI":"22","WaistCirc_in":"29","Diet_notes":"Doesn't eat a lot of meat"}
},
{
"Subject ID":"cr",
"Sample ID":"cr-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"28","Sex":"M","Ht_in":"67","Wt_lbs":"133","BMI":"20.8","WaistCirc_in":"26","Diet_notes":"-"}
},
{
"Subject ID":"cs",
"Sample ID":"cs-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"32","Sex":"F","Ht_in":"65","Wt_lbs":"155","BMI":"26","WaistCirc_in":"32","Diet_notes":"-"}
},
{
"Subject ID":"cs",
"Sample ID":"cs-0029",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0029","Age":"32","Sex":"F","Ht_in":"65","Wt_lbs":"155","BMI":"26","WaistCirc_in":"32","Diet_notes":"-"}
},
{
"Subject ID":"ct",
"Sample ID":"ct-0001",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0001","Age":"35","Sex":"M","Ht_in":"71","Wt_lbs":"162.8","BMI":"22.5","WaistCirc_in":"33","Diet_notes":"-"}
},
{
"Subject ID":"ct",
"Sample ID":"ct-0005",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0005","Age":"35","Sex":"M","Ht_in":"71","Wt_lbs":"162.8","BMI":"22.5","WaistCirc_in":"33","Diet_notes":"-"}
},
{
"Subject ID":"cu",
"Sample ID":"cu-0001",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0001","Age":"29","Sex":"M","Ht_in":"72","Wt_lbs":"175.4","BMI":"23.8","WaistCirc_in":"35","Diet_notes":"-"}
},
{
"Subject ID":"cu",
"Sample ID":"cu-0009",
"Factors":{"Diet":"-"},
"Additional sample data":{"Time Point":"0009","Age":"29","Sex":"M","Ht_in":"72","Wt_lbs":"175.4","BMI":"23.8","WaistCirc_in":"35","Diet_notes":"-"}
},
{
"Subject ID":"cv",
"Sample ID":"cv-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"21","Sex":"M","Ht_in":"74","Wt_lbs":"193","BMI":"24.8","WaistCirc_in":"34.5","Diet_notes":"-"}
},
{
"Subject ID":"cw",
"Sample ID":"cw-0001",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0001","Age":"30","Sex":"F","Ht_in":"64","Wt_lbs":"132","BMI":"22.7","WaistCirc_in":"29","Diet_notes":"-"}
},
{
"Subject ID":"cw",
"Sample ID":"cw-0035",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0035","Age":"30","Sex":"F","Ht_in":"64","Wt_lbs":"132","BMI":"22.7","WaistCirc_in":"29","Diet_notes":"-"}
},
{
"Subject ID":"cw",
"Sample ID":"cw-0053",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0053","Age":"30","Sex":"F","Ht_in":"64","Wt_lbs":"132","BMI":"22.7","WaistCirc_in":"29","Diet_notes":"-"}
},
{
"Subject ID":"cy",
"Sample ID":"cy-0001",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0001","Age":"45","Sex":"F","Ht_in":"71","Wt_lbs":"161","BMI":"22.4","WaistCirc_in":"32","Diet_notes":"-"}
},
{
"Subject ID":"cy",
"Sample ID":"cy-0019",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0019","Age":"45","Sex":"F","Ht_in":"71","Wt_lbs":"161","BMI":"22.4","WaistCirc_in":"32","Diet_notes":"-"}
},
{
"Subject ID":"cy",
"Sample ID":"cy-0037",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0037","Age":"45","Sex":"F","Ht_in":"71","Wt_lbs":"161","BMI":"22.4","WaistCirc_in":"32","Diet_notes":"-"}
},
{
"Subject ID":"cz",
"Sample ID":"cz-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"21","Sex":"M","Ht_in":"74","Wt_lbs":"184","BMI":"23.5","WaistCirc_in":"32.5","Diet_notes":"avoids sugar"}
},
{
"Subject ID":"cz",
"Sample ID":"cz-0039",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0039","Age":"21","Sex":"M","Ht_in":"74","Wt_lbs":"184","BMI":"23.5","WaistCirc_in":"32.5","Diet_notes":"avoids sugar"}
},
{
"Subject ID":"da",
"Sample ID":"da-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"23","Sex":"M","Ht_in":"67","Wt_lbs":"167","BMI":"25.6","WaistCirc_in":"30","Diet_notes":"-"}
},
{
"Subject ID":"da",
"Sample ID":"da-0044",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0044","Age":"23","Sex":"M","Ht_in":"67","Wt_lbs":"167","BMI":"25.6","WaistCirc_in":"30","Diet_notes":"-"}
},
{
"Subject ID":"db",
"Sample ID":"db-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"19","Sex":"M","Ht_in":"68","Wt_lbs":"157.2","BMI":"23.5","WaistCirc_in":"29","Diet_notes":"Limits red meat"}
},
{
"Subject ID":"dc",
"Sample ID":"dc-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"25","Sex":"M","Ht_in":"68","Wt_lbs":"173","BMI":"25.8","WaistCirc_in":"31","Diet_notes":"-"}
},
{
"Subject ID":"dc",
"Sample ID":"dc-0028",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0028","Age":"25","Sex":"M","Ht_in":"68","Wt_lbs":"173","BMI":"25.8","WaistCirc_in":"31","Diet_notes":"-"}
},
{
"Subject ID":"dd",
"Sample ID":"dd-0041",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0041","Age":"33","Sex":"F","Ht_in":"68","Wt_lbs":"134.8","BMI":"20.3","WaistCirc_in":"29.5","Diet_notes":"Vegan"}
},
{
"Subject ID":"de",
"Sample ID":"de-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"29","Sex":"F","Ht_in":"68","Wt_lbs":"127","BMI":"19.4","WaistCirc_in":"27","Diet_notes":"-"}
},
{
"Subject ID":"de",
"Sample ID":"de-0031",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0031","Age":"29","Sex":"F","Ht_in":"68","Wt_lbs":"127","BMI":"19.4","WaistCirc_in":"27","Diet_notes":"-"}
},
{
"Subject ID":"df",
"Sample ID":"df-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"43","Sex":"F","Ht_in":"64","Wt_lbs":"126","BMI":"21.4","WaistCirc_in":"25.5","Diet_notes":"-"}
},
{
"Subject ID":"df",
"Sample ID":"df-0030",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0030","Age":"43","Sex":"F","Ht_in":"64","Wt_lbs":"126","BMI":"21.4","WaistCirc_in":"25.5","Diet_notes":"-"}
},
{
"Subject ID":"dg",
"Sample ID":"dg-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"30","Sex":"M","Ht_in":"73","Wt_lbs":"184","BMI":"23.7","WaistCirc_in":"32.5","Diet_notes":"-"}
},
{
"Subject ID":"dg",
"Sample ID":"dg-0008",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0008","Age":"30","Sex":"M","Ht_in":"73","Wt_lbs":"184","BMI":"23.7","WaistCirc_in":"32.5","Diet_notes":"-"}
},
{
"Subject ID":"dh",
"Sample ID":"dh-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"22","Sex":"F","Ht_in":"63","Wt_lbs":"123.8","BMI":"21.6","WaistCirc_in":"25.5","Diet_notes":"-"}
},
{
"Subject ID":"dh",
"Sample ID":"dh-0010",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0010","Age":"22","Sex":"F","Ht_in":"63","Wt_lbs":"123.8","BMI":"21.6","WaistCirc_in":"25.5","Diet_notes":"-"}
},
{
"Subject ID":"di",
"Sample ID":"di-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"31","Sex":"M","Ht_in":"70","Wt_lbs":"168","BMI":"24","WaistCirc_in":"29","Diet_notes":"-"}
},
{
"Subject ID":"di",
"Sample ID":"di-0009",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0009","Age":"31","Sex":"M","Ht_in":"70","Wt_lbs":"168","BMI":"24","WaistCirc_in":"29","Diet_notes":"-"}
},
{
"Subject ID":"dj",
"Sample ID":"dj-0001",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0001","Age":"19","Sex":"M","Ht_in":"68","Wt_lbs":"169","BMI":"25.3","WaistCirc_in":"33","Diet_notes":"-"}
},
{
"Subject ID":"dj",
"Sample ID":"dj-0016",
"Factors":{"Diet":"Vegetarian"},
"Additional sample data":{"Time Point":"0016","Age":"19","Sex":"M","Ht_in":"68","Wt_lbs":"169","BMI":"25.3","WaistCirc_in":"33","Diet_notes":"-"}
},
{
"Subject ID":"dk",
"Sample ID":"dk-0001",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0001","Age":"40","Sex":"F","Ht_in":"62","Wt_lbs":"132.8","BMI":"24.2","WaistCirc_in":"27.5","Diet_notes":"-"}
},
{
"Subject ID":"dk",
"Sample ID":"dk-0003",
"Factors":{"Diet":"Omnivore"},
"Additional sample data":{"Time Point":"0003","Age":"40","Sex":"F","Ht_in":"62","Wt_lbs":"132.8","BMI":"24.2","WaistCirc_in":"27.5","Diet_notes":"-"}
}
],
"COLLECTION":{"COLLECTION_SUMMARY":"Stool samples were obtained from OpenBiome (https://www.openbiome.org/), a non-profit stool bank, under a protocol approved by the institutional review boards at MIT and the Broad Institute (IRB protocol ID #1603506899)","SAMPLE_TYPE":"Stool","STORAGE_CONDITIONS":"-80℃"},

"TREATMENT":{"TREATMENT_SUMMARY":"Subjects were healthy people screened by OpenBiome to minimize the potential for carrying pathogens, with ages between 19-45 years and with BMI between 17.5-29.8 at initial sampling."},

"SAMPLEPREP":{"SAMPLEPREP_SUMMARY":"Raw stool were diluted 1:10 in 12.5% glycerol buffer and 0.9% NaCl, homogenized and filtered through a 330um filter. HILIC-pos: LC-MS samples were prepared from homogenate(10 μL) via protein precipitation with the addition of nine volumes of 74.9:24.9:0.2 v/v/v acetonitrile/methanol/formic acid containing stable isotope-labeled internal standards (valine-d8, Isotec; and phenylalanine-d8, Cambridge Isotope Laboratories; Andover, MA). The samples are centrifuged (10 min, 9,000 x g, 4°C), and the supernatants were injected directly. HILIC-neg: Stool homogenates (30μL) were extracted using 120 μL of 80% methanol (VWR) containing 0.05 ng/μL inosine-15N4, 0.05 ng/μL thymine-d4, and 0.1 ng/μL glycocholate-d4 as internal standards (Cambridge Isotope Laboratories). The samples were centrifuged (10 min, 9,000 x g, 4ºC) and the supernatants (10 μL) were injected directly. C18-neg: Stool homogenates (30 μL) were extracted using 90 μL of methanol containing PGE2-d4 as an internal standard (Cayman Chemical Co.; Ann Arbor, MI) and centrifuged (10 min, 9,000 x g, 4°C). C8-pos: Lipids were extracted from homogenates (10 μL) using 190 μL of isopropanol containing 1-dodecanoyl-2-tridecanoyl-sn-glycero-3-phosphocholine as an internal standard (Avanti Polar Lipids; Alabaster, AL). After centrifugation (10 min, 9,000 x g, ambient temperature), supernatants (10 μL) were injected directly"},

"CHROMATOGRAPHY":{"CHROMATOGRAPHY_TYPE":"HILIC","INSTRUMENT_NAME":"Thermo Q Exactive Plus Orbitrap","COLUMN_NAME":"Waters Atlantis HILIC (150 x 2 mm)","SOLVENT_A":"10 mM ammonium formate and 0.1% formic acid in water","SOLVENT_B":"acetonitrile with 0.1% formic acid"},

"ANALYSIS":{"ANALYSIS_TYPE":"MS","OPERATOR_NAME":"Justin Scott"},

"MS":{"INSTRUMENT_NAME":"Thermo Q Exactive Plus Orbitrap","INSTRUMENT_TYPE":"Orbitrap","MS_TYPE":"ESI","ION_MODE":"POSITIVE","MS_COMMENTS":"Raw data were processed using TraceFinder 3.3 software (Thermo Fisher Scientific; Waltham, MA) and Progenesis QI (Nonlinear Dynamics; Newcastle upon Tyne, UK). Metabolite identities were confirmed using authentic reference standards or reference samples.","MS_RESULTS_FILE":"ST001192_AN001984_Results.txt UNITS:abundance Has m/z:Yes Has RT:Yes RT units:Minutes"},

"MS_METABOLITE_DATA":{
"Units":"Abundace",

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ID)":"HMDB00696"},{"Metabolite":"aspartate","Compound":"cmp.QI30","m/z":"134.0448","Retention time":"8.06","HMDB ID (*representative ID)":"HMDB00191"},{"Metabolite":"glutamate","Compound":"cmp.QI79","m/z":"148.0604","Retention time":"7.51","HMDB ID (*representative ID)":"HMDB00148"},{"Metabolite":"asparagine","Compound":"cmp.QI29","m/z":"133.0608","Retention time":"7.85","HMDB ID (*representative ID)":"HMDB00168"},{"Metabolite":"glutamine","Compound":"cmp.QI80","m/z":"147.0764","Retention time":"7.94","HMDB ID (*representative ID)":"HMDB00641"},{"Metabolite":"histidine","Compound":"cmp.QI87","m/z":"156.0768","Retention time":"9.33","HMDB ID (*representative ID)":"HMDB00177"},{"Metabolite":"arginine","Compound":"cmp.QI28","m/z":"175.1190","Retention time":"9.07","HMDB ID (*representative ID)":"HMDB00517"},{"Metabolite":"lysine","Compound":"cmp.QI95","m/z":"147.1128","Retention time":"9.31","HMDB ID (*representative ID)":"HMDB00182"},{"Metabolite":"valine","Compound":"cmp.TF18","m/z":"118.0857","Retention time":"7.25","HMDB ID (*representative ID)":"HMDB00883"},{"Metabolite":"leucine","Compound":"cmp.TF10","m/z":"132.1011","Retention time":"6.86","HMDB ID (*representative ID)":"HMDB00687"},{"Metabolite":"isoleucine","Compound":"cmp.TF9","m/z":"132.1011","Retention time":"6.98","HMDB ID (*representative ID)":"HMDB00172"},{"Metabolite":"phenylalanine","Compound":"cmp.QI117","m/z":"166.0863","Retention time":"6.60","HMDB ID (*representative ID)":"HMDB00159"},{"Metabolite":"tyrosine","Compound":"cmp.QI141","m/z":"182.0812","Retention time":"6.71","HMDB ID (*representative ID)":"HMDB00158"},{"Metabolite":"tryptophan","Compound":"cmp.QI139","m/z":"205.0972","Retention time":"6.39","HMDB ID (*representative ID)":"HMDB00929"},{"Metabolite":"proline","Compound":"cmp.QI121","m/z":"116.0706","Retention time":"7.99","HMDB ID (*representative ID)":"HMDB00162"},{"Metabolite":"hydroxyproline","Compound":"cmp.QI90","m/z":"132.0655","Retention time":"7.79","HMDB ID (*representative ID)":"HMDB00725"},{"Metabolite":"ornithine","Compound":"cmp.QI116","m/z":"133.0971","Retention time":"9.19","HMDB ID (*representative ID)":"HMDB00214"},{"Metabolite":"citrulline","Compound":"cmp.QI65","m/z":"176.1029","Retention time":"8.26","HMDB ID (*representative ID)":"HMDB00904"},{"Metabolite":"taurine","Compound":"cmp.QI135","m/z":"126.0220","Retention time":"5.96","HMDB ID (*representative ID)":"HMDB00251"},{"Metabolite":"5-hydroxytryptophan","Compound":"cmp.QI15","m/z":"221.0921","Retention time":"6.60","HMDB ID (*representative ID)":"HMDB00472"},{"Metabolite":"5-HIAA","Compound":"cmp.QI14","m/z":"192.0655","Retention time":"1.87","HMDB ID (*representative ID)":"HMDB00763"},{"Metabolite":"serotonin","Compound":"cmp.QI131","m/z":"177.1023","Retention time":"6.13","HMDB ID (*representative ID)":"HMDB00259"},{"Metabolite":"GABA/alpha-aminoisobutyric acid","Compound":"cmp.QI78","m/z":"104.0706","Retention time":"7.43","HMDB ID (*representative ID)":"HMDB00112*"},{"Metabolite":"dimethylglycine","Compound":"cmp.QI75","m/z":"104.0706","Retention time":"8.42","HMDB ID (*representative ID)":"HMDB00092"},{"Metabolite":"ADMA","Compound":"cmp.TF2","m/z":"203.1488","Retention time":"9.68","HMDB ID (*representative ID)":"HMDB01539"},{"Metabolite":"SDMA","Compound":"cmp.TF16","m/z":"203.1488","Retention time":"9.58","HMDB ID (*representative ID)":"HMDB03334"},{"Metabolite":"NMMA","Compound":"cmp.QI114","m/z":"189.1346","Retention time":"9.31","HMDB ID (*representative ID)":"HMDB29416"},{"Metabolite":"anthranilic acid","Compound":"cmp.QI27","m/z":"138.0549","Retention time":"1.76","HMDB ID (*representative ID)":"HMDB01123"},{"Metabolite":"kynurenic acid","Compound":"cmp.QI94","m/z":"190.0499","Retention time":"5.12","HMDB ID (*representative ID)":"HMDB00715"},{"Metabolite":"1-methylhistamine","Compound":"cmp.QI4","m/z":"126.1025","Retention time":"9.48","HMDB ID (*representative ID)":"HMDB00898"},{"Metabolite":"carnosine","Compound":"cmp.QI61","m/z":"227.1138","Retention time":"9.67","HMDB ID (*representative ID)":"HMDB00033"},{"Metabolite":"histamine","Compound":"cmp.QI86","m/z":"112.0869","Retention time":"9.09","HMDB ID (*representative ID)":"HMDB00870"},{"Metabolite":"3-hydroxyanthranilic acid","Compound":"cmp.QI9","m/z":"154.0499","Retention time":"1.83","HMDB ID (*representative ID)":"HMDB01476"},{"Metabolite":"N-carbamoyl-beta-alanine","Compound":"cmp.QI111","m/z":"133.0608","Retention time":"3.96","HMDB ID (*representative ID)":"HMDB00026"},{"Metabolite":"thiamine","Compound":"cmp.QI136","m/z":"265.1117","Retention time":"9.55","HMDB ID (*representative ID)":"HMDB00235"},{"Metabolite":"niacinamide","Compound":"cmp.QI112","m/z":"123.0553","Retention time":"3.53","HMDB ID (*representative ID)":"HMDB01406"},{"Metabolite":"betaine","Compound":"cmp.TF4","m/z":"118.0857","Retention time":"8.86","HMDB ID (*representative ID)":"HMDB00043"},{"Metabolite":"choline","Compound":"cmp.QI64","m/z":"104.1069","Retention time":"8.12","HMDB ID (*representative ID)":"HMDB00097"},{"Metabolite":"phosphocholine","Compound":"cmp.TF13","m/z":"184.0723","Retention time":"12.02","HMDB ID (*representative ID)":"HMDB01565"},{"Metabolite":"alpha-glycerophosphocholine","Compound":"cmp.QI25","m/z":"258.1101","Retention time":"10.39","HMDB ID (*representative ID)":"HMDB00086"},{"Metabolite":"acetylcholine","Compound":"cmp.QI20","m/z":"146.1174","Retention time":"7.62","HMDB ID (*representative ID)":"HMDB00895"},{"Metabolite":"spermidine","Compound":"cmp.QI132","m/z":"146.1651","Retention time":"10.53","HMDB ID (*representative ID)":"HMDB01257"},{"Metabolite":"creatine","Compound":"cmp.QI70","m/z":"132.0768","Retention time":"8.19","HMDB ID (*representative ID)":"HMDB00064"},{"Metabolite":"creatinine","Compound":"cmp.QI71","m/z":"114.0662","Retention time":"6.33","HMDB ID (*representative ID)":"HMDB00562"},{"Metabolite":"trimethylamine-N-oxide","Compound":"cmp.QI138","m/z":"76.0758","Retention time":"7.94","HMDB ID (*representative ID)":"HMDB00925"},{"Metabolite":"glycerol","Compound":"cmp.QI81","m/z":"93.0546","Retention time":"4.40","HMDB ID (*representative ID)":"HMDB00131"},{"Metabolite":"adenosine","Compound":"cmp.QI21","m/z":"268.1040","Retention time":"4.86","HMDB ID (*representative ID)":"HMDB00050"},{"Metabolite":"cytosine","Compound":"cmp.QI74","m/z":"112.0505","Retention time":"5.85","HMDB ID (*representative ID)":"HMDB00630"},{"Metabolite":"thymidine","Compound":"cmp.QI137","m/z":"243.0975","Retention time":"2.77","HMDB ID (*representative ID)":"HMDB00273"},{"Metabolite":"xanthosine","Compound":"cmp.QI146","m/z":"285.0829","Retention time":"4.18","HMDB ID (*representative ID)":"HMDB00299"},{"Metabolite":"2-deoxyadenosine","Compound":"cmp.TF1","m/z":"252.1061","Retention time":"6.06","HMDB ID (*representative ID)":"HMDB00101"},{"Metabolite":"2-deoxycytidine","Compound":"cmp.QI6","m/z":"228.0978","Retention time":"5.85","HMDB ID (*representative ID)":"HMDB00014"},{"Metabolite":"cotinine","Compound":"cmp.QI69","m/z":"177.1024","Retention time":"4.89","HMDB ID (*representative ID)":"HMDB01046"},{"Metabolite":"mevalonic acid","Compound":"cmp.TF12","m/z":"149.0799","Retention time":"3.64","HMDB ID (*representative ID)":"HMDB00227"},{"Metabolite":"pipecolic acid","Compound":"cmp.QI120","m/z":"130.0863","Retention time":"7.86","HMDB ID (*representative ID)":"HMDB00716"},{"Metabolite":"5-aminolevulinic acid","Compound":"cmp.QI13","m/z":"132.0656","Retention time":"7.34","HMDB ID (*representative ID)":"HMDB01149"},{"Metabolite":"pyroglutamic acid","Compound":"cmp.TF14","m/z":"130.0491","Retention time":"7.95","HMDB ID (*representative ID)":"HMDB00267"},{"Metabolite":"1-methylnicotinamide","Compound":"cmp.QI5","m/z":"137.0709","Retention time":"8.08","HMDB ID (*representative ID)":"HMDB00699"},{"Metabolite":"methionine sulfoxide","Compound":"cmp.TF11","m/z":"166.0522","Retention time":"8.56","HMDB ID (*representative ID)":"HMDB02005"},{"Metabolite":"sarcosine","Compound":"cmp.TF15","m/z":"90.0549","Retention time":"8.01","HMDB ID (*representative ID)":"HMDB00271"},{"Metabolite":"beta-alanine","Compound":"cmp.TF3","m/z":"90.0549","Retention time":"7.88","HMDB ID (*representative ID)":"HMDB00056"},{"Metabolite":"anserine","Compound":"cmp.QI26","m/z":"241.1295","Retention time":"10.43","HMDB ID (*representative ID)":"HMDB00194"},{"Metabolite":"carnitine","Compound":"cmp.QI60","m/z":"162.1125","Retention time":"8.67","HMDB ID (*representative ID)":"HMDB00062"},{"Metabolite":"C2 carnitine","Compound":"cmp.QI47","m/z":"204.1232","Retention time":"8.51","HMDB ID (*representative ID)":"HMDB00201"},{"Metabolite":"C3 carnitine","Compound":"cmp.QI51","m/z":"218.1387","Retention time":"7.74","HMDB ID (*representative ID)":"HMDB00824"},{"Metabolite":"C3-DC-CH3 carnitine","Compound":"cmp.QI52","m/z":"262.1286","Retention time":"8.43","HMDB ID (*representative ID)":"HMDB13133"},{"Metabolite":"C4 carnitine","Compound":"cmp.QI53","m/z":"232.1544","Retention time":"7.85","HMDB ID (*representative ID)":"HMDB02013"},{"Metabolite":"C4-OH carnitine","Compound":"cmp.QI54","m/z":"248.1494","Retention time":"8.71","HMDB ID (*representative ID)":"HMDB13127"},{"Metabolite":"C5 carnitine","Compound":"cmp.QI55","m/z":"246.1701","Retention time":"7.64","HMDB ID (*representative ID)":"HMDB00688"},{"Metabolite":"C5:1 carnitine","Compound":"cmp.QI56","m/z":"244.1544","Retention time":"8.12","HMDB ID (*representative ID)":"HMDB02366"},{"Metabolite":"C5-DC carnitine","Compound":"cmp.QI57","m/z":"276.1442","Retention time":"7.91","HMDB ID (*representative ID)":"HMDB13130"},{"Metabolite":"C6 carnitine","Compound":"cmp.TF7","m/z":"260.1837","Retention time":"7.75","HMDB ID (*representative ID)":"HMDB00705"},{"Metabolite":"C9 carnitine","Compound":"cmp.QI58","m/z":"302.2326","Retention time":"7.05","HMDB ID (*representative ID)":"HMDB13288"},{"Metabolite":"C10:2 carnitine","Compound":"cmp.QI35","m/z":"312.2168","Retention time":"7.26","HMDB ID (*representative ID)":"HMDB13325"},{"Metabolite":"C14 carnitine","Compound":"cmp.QI36","m/z":"372.3109","Retention time":"6.64","HMDB ID (*representative ID)":"HMDB05066"},{"Metabolite":"C16 carnitine","Compound":"cmp.QI37","m/z":"400.3422","Retention time":"6.52","HMDB ID (*representative ID)":"HMDB00222"},{"Metabolite":"C18 carnitine","Compound":"cmp.QI40","m/z":"428.3735","Retention time":"6.42","HMDB ID (*representative ID)":"HMDB00848"},{"Metabolite":"C18:1 carnitine","Compound":"cmp.QI43","m/z":"426.3577","Retention time":"6.44","HMDB ID (*representative ID)":"HMDB05065"},{"Metabolite":"C18:1-OH carnitine","Compound":"cmp.TF5","m/z":"442.3496","Retention time":"6.91","HMDB ID (*representative ID)":"HMDB13339"},{"Metabolite":"C18:2 carnitine","Compound":"cmp.QI45","m/z":"424.3420","Retention time":"6.49","HMDB ID (*representative ID)":"HMDB06469"},{"Metabolite":"C20 carnitine","Compound":"cmp.QI48","m/z":"456.4046","Retention time":"6.32","HMDB ID (*representative ID)":"HMDB06460"},{"Metabolite":"C20:4 carnitine","Compound":"cmp.QI49","m/z":"448.3421","Retention time":"6.06","HMDB ID (*representative ID)":"n/a"},{"Metabolite":"C26 carnitine","Compound":"cmp.TF6","m/z":"540.4950","Retention time":"6.12","HMDB ID (*representative ID)":"HMDB06347"},{"Metabolite":"3-methoxytyramine","Compound":"cmp.QI10","m/z":"168.1020","Retention time":"6.23","HMDB ID (*representative ID)":"HMDB00022"},{"Metabolite":"atenolol","Compound":"cmp.QI31","m/z":"267.1703","Retention time":"6.77","HMDB ID (*representative ID)":"HMDB01924"},{"Metabolite":"DOPA","Compound":"cmp.QI76","m/z":"198.0761","Retention time":"6.98","HMDB ID (*representative ID)":"HMDB00181"},{"Metabolite":"homoserine","Compound":"cmp.QI89","m/z":"120.0655","Retention time":"7.53","HMDB ID (*representative ID)":"HMDB00719"},{"Metabolite":"metanephrine","Compound":"cmp.QI97","m/z":"198.1125","Retention time":"6.58","HMDB ID (*representative ID)":"HMDB04063"},{"Metabolite":"tyramine","Compound":"cmp.QI140","m/z":"138.0913","Retention time":"6.15","HMDB ID (*representative ID)":"HMDB00306"},{"Metabolite":"methylthioadenosine","Compound":"cmp.QI99","m/z":"298.0967","Retention time":"4.09","HMDB ID (*representative ID)":"HMDB01173"},{"Metabolite":"s-adenosylmethionine","Compound":"cmp.QI129","m/z":"399.1446","Retention time":"10.13","HMDB ID (*representative ID)":"HMDB01185"},{"Metabolite":"1-methyladenosine","Compound":"cmp.QI2","m/z":"282.1196","Retention time":"7.55","HMDB ID (*representative ID)":"HMDB03331"},{"Metabolite":"bilirubin","Compound":"cmp.QI34","m/z":"585.2708","Retention time":"1.58","HMDB ID (*representative ID)":"HMDB00054"},{"Metabolite":"C18:0 LPC","Compound":"cmp.QI41","m/z":"524.3712","Retention time":"7.52","HMDB ID (*representative ID)":"HMDB10384"},{"Metabolite":"C16:0 SM","Compound":"cmp.QI39","m/z":"703.5747","Retention time":"7.09","HMDB ID (*representative ID)":"HMDB10169"},{"Metabolite":"cortisone","Compound":"cmp.QI68","m/z":"361.2010","Retention time":"1.74","HMDB ID (*representative ID)":"HMDB02802"},{"Metabolite":"ectoine","Compound":"cmp.QI77","m/z":"143.0815","Retention time":"8.82","HMDB ID (*representative ID)":"n/a"},{"Metabolite":"hypoxanthine","Compound":"cmp.QI91","m/z":"137.0457","Retention time":"4.69","HMDB ID (*representative ID)":"HMDB00157"},{"Metabolite":"1-methylguanosine/2-O-methylguanosine","Compound":"cmp.QI3","m/z":"298.1147","Retention time":"4.93","HMDB ID (*representative ID)":"HMDB01563*"},{"Metabolite":"1,2,4-trimethylbenzene","Compound":"cmp.QI1","m/z":"121.1011","Retention time":"1.88","HMDB ID (*representative ID)":"HMDB13733"},{"Metabolite":"2'-O-methyladenosine/3'-O-methyladenosine","Compound":"cmp.QI7","m/z":"282.1194","Retention time":"4.82","HMDB ID (*representative ID)":"HMDB04326*"},{"Metabolite":"3-dehydroxycarnitine","Compound":"cmp.QI8","m/z":"146.1175","Retention time":"8.62","HMDB ID (*representative ID)":"HMDB06831"},{"Metabolite":"3-methylhistidine","Compound":"cmp.QI11","m/z":"170.0924","Retention time":"9.79","HMDB ID (*representative ID)":"HMDB00479"},{"Metabolite":"4-guanidinobutanoic acid","Compound":"cmp.QI12","m/z":"146.0924","Retention time":"7.11","HMDB ID (*representative ID)":"HMDB03464"},{"Metabolite":"5-methylcytidine","Compound":"cmp.QI16","m/z":"258.1084","Retention time":"5.71","HMDB ID (*representative ID)":"HMDB00982"},{"Metabolite":"5-methylcytosine","Compound":"cmp.QI17","m/z":"126.0662","Retention time":"6.15","HMDB ID (*representative ID)":"HMDB02894"},{"Metabolite":"6,8-dihydroxypurine","Compound":"cmp.QI18","m/z":"153.0407","Retention time":"4.17","HMDB ID (*representative ID)":"HMDB01182"},{"Metabolite":"DMGV","Compound":"cmp.TF8","m/z":"202.1197","Retention time":"7.84","HMDB ID (*representative ID)":"n/a"},{"Metabolite":"N-a-acetyarginine","Compound":"cmp.QI104","m/z":"217.1295","Retention time":"8.04","HMDB ID (*representative ID)":"HMDB04620"},{"Metabolite":"N-acetylglutamine","Compound":"cmp.QI105","m/z":"189.0870","Retention time":"6.89","HMDB ID (*representative ID)":"HMDB06029"},{"Metabolite":"N-acetylleucine","Compound":"cmp.QI106","m/z":"174.1125","Retention time":"2.63","HMDB ID (*representative ID)":"HMDB11756"},{"Metabolite":"N-acetylornithine","Compound":"cmp.QI107","m/z":"175.1077","Retention time":"8.35","HMDB ID (*representative ID)":"HMDB03357"},{"Metabolite":"N-acetylputrescine","Compound":"cmp.QI108","m/z":"131.1179","Retention time":"7.80","HMDB ID (*representative ID)":"HMDB02064"},{"Metabolite":"N-acetyltryptophan","Compound":"cmp.QI109","m/z":"247.1078","Retention time":"2.75","HMDB ID (*representative ID)":"HMDB13713"},{"Metabolite":"N-acetyphenylalanine","Compound":"cmp.QI110","m/z":"208.0969","Retention time":"3.07","HMDB ID (*representative ID)":"HMDB00512"},{"Metabolite":"N1-acetylspermidine","Compound":"cmp.QI101","m/z":"188.1758","Retention time":"9.71","HMDB ID (*representative ID)":"HMDB01276"},{"Metabolite":"N1-acetylspermine","Compound":"cmp.QI102","m/z":"245.2336","Retention time":"10.86","HMDB ID (*representative ID)":"HMDB01186"},{"Metabolite":"N6-acetyllysine","Compound":"cmp.QI103","m/z":"189.1233","Retention time":"8.25","HMDB ID (*representative ID)":"HMDB00206"},{"Metabolite":"acetaminophen","Compound":"cmp.QI19","m/z":"152.0706","Retention time":"1.89","HMDB ID (*representative ID)":"HMDB01859"},{"Metabolite":"adrenochrome","Compound":"cmp.QI22","m/z":"180.0655","Retention time":"4.38","HMDB ID (*representative ID)":"HMDB12884"},{"Metabolite":"alanyalanine","Compound":"cmp.QI24","m/z":"161.0920","Retention time":"7.78","HMDB ID (*representative ID)":"HMDB03459"},{"Metabolite":"beta-guanidinopropionic acid","Compound":"cmp.QI33","m/z":"132.0767","Retention time":"7.34","HMDB ID (*representative ID)":"HMDB13222"},{"Metabolite":"cadaverine","Compound":"cmp.QI59","m/z":"103.1229","Retention time":"9.21","HMDB ID (*representative ID)":"HMDB02322"},{"Metabolite":"cellobiose","Compound":"cmp.QI62","m/z":"343.1237","Retention time":"6.03","HMDB ID (*representative ID)":"HMDB00055"},{"Metabolite":"cerulenin","Compound":"cmp.QI63","m/z":"224.1281","Retention time":"1.75","HMDB ID (*representative ID)":"HMDB15168"},{"Metabolite":"cortexolone/2,1-deoxycortisol","Compound":"cmp.QI66","m/z":"347.2217","Retention time":"1.71","HMDB ID (*representative ID)":"HMDB00015*"},{"Metabolite":"cortisol","Compound":"cmp.QI67","m/z":"363.2166","Retention time":"1.70","HMDB ID (*representative ID)":"HMDB00063"},{"Metabolite":"cyclohexylamine","Compound":"cmp.QI72","m/z":"100.1120","Retention time":"6.27","HMDB ID (*representative ID)":"HMDB31404"},{"Metabolite":"cytidine","Compound":"cmp.QI73","m/z":"244.0928","Retention time":"5.72","HMDB ID (*representative ID)":"HMDB00089"},{"Metabolite":"guanidoacetic acid","Compound":"cmp.QI83","m/z":"118.0611","Retention time":"7.74","HMDB ID (*representative ID)":"HMDB00128"},{"Metabolite":"guanine","Compound":"cmp.QI84","m/z":"152.0567","Retention time":"5.26","HMDB ID (*representative ID)":"HMDB00132"},{"Metabolite":"guanosine","Compound":"cmp.QI85","m/z":"284.0989","Retention time":"5.14","HMDB ID (*representative ID)":"HMDB00133"},{"Metabolite":"histidinol","Compound":"cmp.QI88","m/z":"142.0975","Retention time":"8.95","HMDB ID (*representative ID)":"HMDB03431"},{"Metabolite":"imidazoleacetic acid","Compound":"cmp.QI92","m/z":"127.0502","Retention time":"7.99","HMDB ID (*representative ID)":"HMDB02024"},{"Metabolite":"m-coumaric acid","Compound":"cmp.QI96","m/z":"165.0547","Retention time":"1.75","HMDB ID (*representative ID)":"HMDB01713"},{"Metabolite":"nicotinate","Compound":"cmp.QI113","m/z":"124.0393","Retention time":"3.55","HMDB ID (*representative ID)":"HMDB01488"},{"Metabolite":"nor-psi-tropine","Compound":"cmp.QI115","m/z":"128.1070","Retention time":"7.63","HMDB ID (*representative ID)":"HMDB31667"},{"Metabolite":"phytosphingosine","Compound":"cmp.QI119","m/z":"318.3003","Retention time":"5.74","HMDB ID (*representative ID)":"HMDB04610"},{"Metabolite":"proline betaine","Compound":"cmp.QI122","m/z":"144.1018","Retention time":"9.10","HMDB ID (*representative ID)":"HMDB04827"},{"Metabolite":"pseudouridine","Compound":"cmp.QI123","m/z":"245.0769","Retention time":"4.04","HMDB ID (*representative ID)":"HMDB00767"},{"Metabolite":"pterin","Compound":"cmp.QI124","m/z":"164.0567","Retention time":"4.58","HMDB ID (*representative ID)":"HMDB00802"},{"Metabolite":"putrescine","Compound":"cmp.QI125","m/z":"89.1074","Retention time":"9.26","HMDB ID (*representative ID)":"HMDB01414"},{"Metabolite":"pyridoxamine","Compound":"cmp.QI126","m/z":"169.0971","Retention time":"8.98","HMDB ID (*representative ID)":"HMDB01431"},{"Metabolite":"quercetin","Compound":"cmp.QI127","m/z":"303.0499","Retention time":"1.73","HMDB ID (*representative ID)":"HMDB05794"},{"Metabolite":"sphinganine","Compound":"cmp.QI133","m/z":"302.3053","Retention time":"5.64","HMDB ID (*representative ID)":"HMDB00269"},{"Metabolite":"urocanic acid","Compound":"cmp.QI143","m/z":"139.0502","Retention time":"4.34","HMDB ID (*representative ID)":"HMDB00301"},{"Metabolite":"xanthine","Compound":"cmp.QI145","m/z":"153.0407","Retention time":"3.66","HMDB ID (*representative ID)":"HMDB00292"}]
}

}