#METABOLOMICS WORKBENCH efahy_20130215_9775041_mwtab.txt DATATRACK_ID:36 STUDY_ID:ST000004 ANALYSIS_ID:AN000007 PROJECT_ID:PR000004 VERSION 1 CREATED_ON 2016-09-17 #PROJECT PR:PROJECT_TITLE LIPID MAPS Lipidomics studies PR:PROJECT_TYPE MS quantitative analysis PR:PROJECT_SUMMARY Multi-center quantitative lipidomics studies on samples from human and murine PR:PROJECT_SUMMARY (LIPIDMAPS) PR:INSTITUTE LIPID MAPS PR:DEPARTMENT Multiple PR:LABORATORY Multiple PR:LAST_NAME Fahy PR:FIRST_NAME Eoin PR:ADDRESS UCSD PR:EMAIL efahy@ucsd.edu PR:PHONE - PR:FUNDING_SOURCE NIGMS #STUDY ST:STUDY_TITLE Lipidomics studies on NIDDK / NIST human plasma samples ST:STUDY_TYPE MS analysis on human plasma ST:STUDY_SUMMARY The National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK) in ST:STUDY_SUMMARY with the National Institute of Standards (NIST) recently produced a human ST:STUDY_SUMMARY standard reference material (SRM 1950) for metabolite analysis. The SRM was ST:STUDY_SUMMARY by obtaining plasma samples from 100 individuals between 40 and 50 years of ST:STUDY_SUMMARY whose ethnicity was representative of the US population and that included an ST:STUDY_SUMMARY number of men and women. The intent of the NIDDK/NIST project was to provide a ST:STUDY_SUMMARY material that would be publically available to researchers and that could be ST:STUDY_SUMMARY by the clinical chemistry community to identify plasma metabolites for ST:STUDY_SUMMARY purposes. Signature metabolites could then be further probed for their ST:STUDY_SUMMARY as disease biomarkers. The LIPID MAPS Consortium has undertaken the task to ST:STUDY_SUMMARY this SRM by systematically identifying and quantifying the lipid molecular ST:STUDY_SUMMARY in the six main categories of mammalian lipids. The quantitative levels of over ST:STUDY_SUMMARY different lipids present in this reference human plasma sample are presented ST:INSTITUTE LIPID MAPS ST:DEPARTMENT Multiple ST:LABORATORY Multiple ST:LAST_NAME Fahy ST:FIRST_NAME Eoin ST:ADDRESS UCSD ST:EMAIL efahy@ucsd.edu ST:PHONE - ST:NUM_GROUPS 1 ST:TOTAL_SUBJECTS 100 ST:NUM_MALES 100 #SUBJECT SU:SUBJECT_TYPE Human SU:SUBJECT_SPECIES Homo sapiens SU:TAXONOMY_ID 9606 SU:AGE_OR_AGE_RANGE 40-50 SU:SPECIES_GROUP Human #SUBJECT_SAMPLE_FACTORS: SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Additional sample data SUBJECT_SAMPLE_FACTORS - NIDDK1 Pooled sample:yes #COLLECTION CO:COLLECTION_SUMMARY - #TREATMENT TR:TREATMENT_SUMMARY - #SAMPLEPREP SP:SAMPLEPREP_SUMMARY - #CHROMATOGRAPHY CH:CHROMATOGRAPHY_TYPE - CH:INSTRUMENT_NAME - CH:COLUMN_NAME - #ANALYSIS AN:ANALYSIS_TYPE MS #MS MS:MS_COMMENTS - MS:INSTRUMENT_NAME - MS:INSTRUMENT_TYPE - MS:MS_TYPE ESI MS:ION_MODE - #MS_METABOLITE_DATA MS_METABOLITE_DATA:UNITS nmol/ml MS_METABOLITE_DATA_START Samples NIDDK1 Factors Pooled sample:yes 24S-hydroxy-cholesterol 0.0500 25-hydroxy-cholesterol 0.0167 27-hydroxy-cholesterol 0.5333 4beta-hydroxy-cholesterol 0.0533 7alpha-hydroxy-cholesterol 0.3333 7-Dehydrocholesterol 3.0033 7-oxo-cholesterol 0.1233 Campesterol 6.4600 Cholestenone 0.0767 Cholesterol 3150.3667 Desmosterol 1.8067 Lanosterol 0.4833 Lathosterol 5.3767 Sitosterol 5.5333 MS_METABOLITE_DATA_END #METABOLITES METABOLITES_START metabolite_name moverz_quant ri ri_type pubchem_id inchi_key kegg_id other_id other_id_type 24S-hydroxy-cholesterol 121948 C13550 25-hydroxy-cholesterol 65094 C15519 27-hydroxy-cholesterol 99470 C15610 4beta-hydroxy-cholesterol 3247060 7alpha-hydroxy-cholesterol 107722 C03594 7-Dehydrocholesterol 439423 C01164 7-oxo-cholesterol 91474 Campesterol 5283637 C01789 Cholestenone 9908107 C00599 Cholesterol 5997 C00187 Desmosterol 313036 C01802 Lanosterol 246983 C01724 Lathosterol 65728 C01189 Sitosterol 222284 C01753 METABOLITES_END #END