#METABOLOMICS WORKBENCH hormel101_20170623_093204 DATATRACK_ID:1078 STUDY_ID:ST000631 ANALYSIS_ID:AN000963 PROJECT_ID:PR000457
VERSION             	1
CREATED_ON             	June 25, 2017, 8:54 am
#PROJECT
PR:PROJECT_TITLE                 	Metabolomic Mechanisms of Dietary Salt Effects on Blood Pressure
PR:PROJECT_SUMMARY               	"Enhanced sensitivity of blood pressure to salt intake is observed in
PR:PROJECT_SUMMARY               	approximately 50% of hypertensive patients, reaching 75% in African American
PR:PROJECT_SUMMARY               	hypertensive patients. We recently discovered a novel role of abnormal cellular
PR:PROJECT_SUMMARY               	intermediary metabolism in hypertension in the Dahl salt-sensitive (SS) rat, the
PR:PROJECT_SUMMARY               	most commonly used polygenic, hereditary model of human salt-sensitive
PR:PROJECT_SUMMARY               	hypertension. We propose to test the hypothesis that blood pressure sensitivity
PR:PROJECT_SUMMARY               	to dietary salt intake in human is associated with metabolite changes in the
PR:PROJECT_SUMMARY               	urine. Leveraging the expertise and resources at the Mayo Clinic Metabolomics
PR:PROJECT_SUMMARY               	Resources Core, we propose to perform targeted LC/MS analysis and NMR spectra
PR:PROJECT_SUMMARY               	generation in urine samples obtained from a subset of subjects from the Dietary
PR:PROJECT_SUMMARY               	Approaches to Stop Hypertension – Sodium (DASH2) clinical trial and kidney
PR:PROJECT_SUMMARY               	tissue extract and urine samples from SS rats and a newly generated transgenic
PR:PROJECT_SUMMARY               	rat that overexpresses fumarase (SS.Fh1+). The study will be the first to
PR:PROJECT_SUMMARY               	systematically characterize urinary metabolite profiles associated with blood
PR:PROJECT_SUMMARY               	pressure response to salt in humans. The study is anticipated to generate new
PR:PROJECT_SUMMARY               	insight into the mechanisms (particularly renal mechanisms) underlying
PR:PROJECT_SUMMARY               	salt-sensitive hypertension. Findings of the proposed study could lead to an
PR:PROJECT_SUMMARY               	expanded clinical study as well as mechanistic studies in animal models."
PR:INSTITUTE                     	Mayo Clinic
PR:LAST_NAME                     	Liang
PR:FIRST_NAME                    	Mingyu
PR:ADDRESS                       	Medical College of Wisconsin 8701 Watertown Plank Road Milwaukee, WI 53226
PR:EMAIL                         	mliang@mcw.edu
PR:PHONE                         	414-955-8539
#STUDY
ST:STUDY_TITLE                   	TCA Cycle Metabolites of Dietary Salt Effects on Blood Pressure in Rat Urine
ST:STUDY_TITLE                   	(part IV)
ST:STUDY_SUMMARY                 	We propose to analyze kidney tissue extract and urine samples from SS and
ST:STUDY_SUMMARY                 	SS.Fh1+ transgenic rats in addition to the analysis of urine samples from the
ST:STUDY_SUMMARY                 	DASH2 trial. The analysis of the rat samples will be highly valuable for several
ST:STUDY_SUMMARY                 	reasons. First, it will to take the findings in human subjects back to animal
ST:STUDY_SUMMARY                 	models and prepare us for further mechanistic studies. We hypothesize at least
ST:STUDY_SUMMARY                 	some of the effects of dietary salt intake on metabolite profiles in human will
ST:STUDY_SUMMARY                 	be recapitulated or altered in the SS rat. If this is confirmed, we will have a
ST:STUDY_SUMMARY                 	highly informative animal model ready for mechanistic studies in which we can
ST:STUDY_SUMMARY                 	investigate the functional contribution of specific metabolites to hypertension
ST:STUDY_SUMMARY                 	and the mechanisms involved. Second, the rat study will allow us to take
ST:STUDY_SUMMARY                 	advantage of a new and unique transgenic SS.Fh1+ model that we recently
ST:STUDY_SUMMARY                 	developed that overexpresses fumarase (Fh1) on the genetic background of the SS
ST:STUDY_SUMMARY                 	rat. Fumarase is a TCA cycle enzyme previously implicated in salt-induced
ST:STUDY_SUMMARY                 	hypertension in SS rats.
ST:INSTITUTE                     	Mayo Clinic
ST:LAST_NAME                     	Liang
ST:FIRST_NAME                    	Mingyu
ST:ADDRESS                       	Medical College of Wisconsin 8701 Watertown Plank Road Milwaukee, WI 53226
ST:EMAIL                         	mliang@mcw.edu
ST:PHONE                         	414-955-8539
#SUBJECT
SU:SUBJECT_TYPE                  	Rat
SU:SUBJECT_SPECIES               	Rattus norvegicus
SU:TAXONOMY_ID                   	10116
#SUBJECT_SAMPLE_FACTORS:         	SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Additional sample data
SUBJECT_SAMPLE_FACTORS           	-	ms5952-1	Time point:Control	Date of study=8/3/2010; gender=M; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-2	Time point:Control	Date of study=8/3/2010; gender=M; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-3	Time point:Control	Date of study=8/3/2010; gender=M; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-4	Time point:Control	Date of study=8/3/2010; gender=M; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-5	Time point:Control	Date of study=8/3/2010; gender=F; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-6	Time point:Control	Date of study=8/3/2010; gender=F; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-7	Time point:Control	Date of study=8/3/2010; gender=F; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-8	Time point:Control	Date of study=8/3/2010; gender=F; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-9	Time point:7 day HS	Date of study=8/10/2010; gender=M; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-10	Time point:7 day HS	Date of study=8/10/2010; gender=M; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-11	Time point:7 day HS	Date of study=8/10/2010; gender=M; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-12	Time point:7 day HS	Date of study=8/10/2010; gender=M; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-13	Time point:7 day HS	Date of study=8/10/2010; gender=F; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-14	Time point:7 day HS	Date of study=8/10/2010; gender=F; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-15	Time point:7 day HS	Date of study=8/10/2010; gender=F; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-16	Time point:7 day HS	Date of study=8/10/2010; gender=F; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-17	Time point:Control	Date of study=9/2/2010; gender=M; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-18	Time point:Control	Date of study=9/2/2010; gender=M; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-19	Time point:Control	Date of study=9/2/2010; gender=F; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-20	Time point:Control	Date of study=9/2/2010; gender=F; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-21	Time point:Control	Date of study=9/2/2010; gender=M; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-22	Time point:Control	Date of study=9/2/2010; gender=M; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-23	Time point:Control	Date of study=9/2/2010; gender=M; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-24	Time point:Control	Date of study=9/2/2010; gender=F; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-25	Time point:Control	Date of study=9/2/2010; gender=F; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-26	Time point:Control	Date of study=9/2/2010; gender=F; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-27	Time point:7 day HS	Date of study=9/9/2010; gender=M; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-28	Time point:7 day HS	Date of study=9/9/2010; gender=M; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-29	Time point:7 day HS	Date of study=9/9/2010; gender=F; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-30	Time point:7 day HS	Date of study=9/9/2010; gender=F; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-31	Time point:7 day HS	Date of study=9/9/2010; gender=M; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-32	Time point:7 day HS	Date of study=9/9/2010; gender=M; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-33	Time point:7 day HS	Date of study=9/9/2010; gender=M; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-34	Time point:7 day HS	Date of study=9/9/2010; gender=F; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-35	Time point:7 day HS	Date of study=9/9/2010; gender=F; sample source=rat urine
SUBJECT_SAMPLE_FACTORS           	-	ms5952-36	Time point:7 day HS	Date of study=9/9/2010; gender=F; sample source=rat urine
#COLLECTION
CO:COLLECTION_SUMMARY            	Samples are from Transgenic fumerase rats and WT littermates, 13 weeks of age,
CO:COLLECTION_SUMMARY            	placed on low salt or high salt dyets. We are interested in any differences in
CO:COLLECTION_SUMMARY            	the TCA and AA intermediates.
#TREATMENT
TR:TREATMENT_SUMMARY             	We will analyze kidney tissue extract and urine samples from SS rats and the
TR:TREATMENT_SUMMARY             	newly generated SS.Fh1+ transgenic rats. The SS.Fh1+ rat was generated using a
TR:TREATMENT_SUMMARY             	Sleeping Beauty transposon-mediated transgenic technique. Overexpression of
TR:TREATMENT_SUMMARY             	fumarase has been confirmed in SS.Fh1+ rats. Preliminary study indicated that
TR:TREATMENT_SUMMARY             	the development of salt-induced hypertension was altered in SS.Fh1+ rats
TR:TREATMENT_SUMMARY             	compared to wild-type littermate SS rats. We will analyze kidney tissue extract
TR:TREATMENT_SUMMARY             	and urine samples collected from rats maintained on a 0.4% NaCl diet or switched
TR:TREATMENT_SUMMARY             	to a 4% NaCl diet for 7 days. The dietary protocol has been used in numerous
TR:TREATMENT_SUMMARY             	studies to examine mechanisms underlying salt sensitivity including early
TR:TREATMENT_SUMMARY             	responses (7 days) to salt in the SS model. In total, 64 rat samples (two rat
TR:TREATMENT_SUMMARY             	strains, two salt levels, and 8 rats per condition) will be analyzed.
#SAMPLEPREP
SP:SAMPLEPREP_SUMMARY            	Rat urine TCA concentrations
#CHROMATOGRAPHY
CH:CHROMATOGRAPHY_TYPE           	GC
CH:INSTRUMENT_NAME               	Agilent 7890A
CH:COLUMN_NAME                   	Agilent HP5-MS (30m × 0.25mm, 0.25 um)
#ANALYSIS
AN:ANALYSIS_TYPE                 	MS
#MS
MS:MS_COMMENTS                   	-
MS:INSTRUMENT_NAME               	Agilent 5975C
MS:INSTRUMENT_TYPE               	Single quadrupole
MS:MS_TYPE                       	EI
MS:ION_MODE                      	POSITIVE
#MS_METABOLITE_DATA
MS_METABOLITE_DATA:UNITS         	uM
MS_METABOLITE_DATA_START
Samples	ms5952-1	ms5952-2	ms5952-3	ms5952-4	ms5952-5	ms5952-6	ms5952-7	ms5952-8	ms5952-9	ms5952-10	ms5952-11	ms5952-12	ms5952-13	ms5952-14	ms5952-15	ms5952-16	ms5952-17	ms5952-18	ms5952-19	ms5952-20	ms5952-21	ms5952-22	ms5952-23	ms5952-24	ms5952-25	ms5952-26	ms5952-27	ms5952-28	ms5952-29	ms5952-30	ms5952-31	ms5952-32	ms5952-33	ms5952-34	ms5952-35	ms5952-36
Factors	Time point:Control	Time point:Control	Time point:Control	Time point:Control	Time point:Control	Time point:Control	Time point:Control	Time point:Control	Time point:7 day HS	Time point:7 day HS	Time point:7 day HS	Time point:7 day HS	Time point:7 day HS	Time point:7 day HS	Time point:7 day HS	Time point:7 day HS	Time point:Control	Time point:Control	Time point:Control	Time point:Control	Time point:Control	Time point:Control	Time point:Control	Time point:Control	Time point:Control	Time point:Control	Time point:7 day HS	Time point:7 day HS	Time point:7 day HS	Time point:7 day HS	Time point:7 day HS	Time point:7 day HS	Time point:7 day HS	Time point:7 day HS	Time point:7 day HS	Time point:7 day HS
Lactate	121.8370428	323.9830588	176.0009637	151.5138174	161.1559509	142.7735244	240.7109416	448.0034726	58.7345206	64.86696052	78.29252482	79.31890972	73.27702133	98.56697829	138.7821383	91.6556478	227.8093975	217.5316889	115.5196936	86.91417157	160.1013193	118.5660886	243.7256764	383.95311	174.6952399	126.4499657	75.40695843	105.8831837	115.0870091	70.53544481	71.76623988	106.208651	218.4515234	69.82112055	200.7405387	109.4228018
Succinate	99.2996057	170.0122844	126.2426559	83.06418732	142.0350439	111.964387	219.4656715	272.0321653	27.03761761	25.18949179	45.10522927	33.017913	54.99796583	83.54079335	87.14598147	40.64901018	113.4271406	69.81592255	137.0905841	97.95176824	82.58426701	88.41309726	82.7877143	123.4418308	82.08857833	47.87592963	25.20688216	41.93986406	58.25854226	60.30933219	30.81638033	37.27471168	21.83247958	108.1775993	87.02885222	144.0841026
Fumarate	24.24363463	24.72609837	19.54562058	12.91218637	29.9096659	15.87095766	30.42395502	44.29997268	7.332107871	4.820612287	8.212504645	8.204195041	20.86932529	21.08381028	29.33639825	9.949379978	21.75077352	14.63179105	43.92036612	27.46179054	20.97561915	10.71267985	14.2940784	53.13607146	63.2771294	14.86354399	9.714580403	14.4071471	31.43414662	14.87726872	8.119773687	14.23628981	8.460692503	48.18066297	51.39143038	32.85776176
Oxaloacetate	0.509410392	2.161661189	6.771573213	2.876256604	1.392368032	1.80676983	2.503243982	3.393510193	1.714802055	0.910044588	0.812163259	0.717056444	0.698382088	1.007731905	1.10146809	1.346342473	0.492574789	2.26754096	1.268028258	1.856902496	2.128398008	1.634346239	2.796929632	1.075923288	1.551617792	2.07055415	2.34565664	0.526553821	0.6300006	1.174408933	1.515630409	0.771276456	0.763298269	0.958073205	0.730029136	1.435455569
Ketoglutarate	1092.490743	1516.949378	1241.317411	783.1996532	1021.062964	506.5997198	899.2445391	1200.643254	536.3670269	366.8365912	589.6898584	576.979829	460.3486046	539.5678333	894.4679505	257.7621708	1347.806759	891.6797468	1326.770444	841.1916018	1272.542809	832.3379793	1178.153328	1757.440993	1476.960829	826.8673245	596.2631529	858.2225872	949.4360479	614.5843141	463.5759237	764.1377449	549.1289682	860.9199463	1056.756464	1179.545139
Malate	63.87881006	79.90054229	56.39464817	37.29369649	130.0189312	62.02082194	128.4469148	194.0166219	27.07188918	15.09795756	29.13442528	28.38366951	93.97391204	86.84747069	124.8918446	42.96209835	75.14731576	47.942705	195.6903144	129.4884383	70.35590308	33.02586268	50.10494887	262.5152459	272.8387953	57.03786996	38.15797319	62.63482771	141.7884585	68.16833832	30.15531287	59.18173674	31.81760034	225.5198828	227.9057526	151.8167219
cis-Aconitate	321.8058114	451.7885223	433.4575871	268.6780711	560.157153	297.2569097	535.8255304	667.3993756	105.013712	132.4733843	115.4313725	121.9559269	203.1356199	186.3002405	171.6320246	157.4321906	306.2705054	232.2790916	309.0943193	270.33129	282.0170421	232.2114349	292.7943086	420.1524209	389.4296346	274.9333854	87.63043341	92.83760192	181.742928	209.0391889	122.9851715	105.2447102	87.92753687	122.8047878	179.627693	147.5199027
Citrate	1149.156219	2324.864878	1487.278698	644.8026608	1485.13181	1065.545293	1887.529338	3590.641158	730.2351355	438.563212	866.6778595	643.6256638	969.850851	1482.677622	1484.623586	764.1787721	1674.163973	1418.760552	2952.975391	1762.140987	3757.2817	657.5915676	2822.095882	3236.214506	3705.006818	1238.362679	1147.591015	1998.523708	2099.779029	918.4933489	867.2343117	1668.007926	1017.093221	2301.833671	2824.545188	1976.593773
Isocitrate	772.9842309	1093.095218	1026.401267	631.2193035	1149.03909	587.3706989	1118.928719	1267.672806	220.3776209	297.6452208	235.4591342	265.9325698	318.3567382	325.4077373	385.2770843	291.4189292	703.1795282	545.2759128	586.6950271	520.9851573	593.2774738	683.615703	808.546851	965.461703	711.1479104	700.0581655	168.0273567	179.223219	303.9014003	436.2109158	244.3746843	197.3372102	194.9796811	192.9298877	283.9526193	300.7173856
MS_METABOLITE_DATA_END
#METABOLITES
METABOLITES_START
metabolite_name
Lactate
Succinate
Fumarate
Oxaloacetate
Ketoglutarate
Malate
cis-Aconitate
Citrate
Isocitrate
METABOLITES_END
#END