RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0023426
RefMet nameGlcCer 16:1;O2/23:0
Alternative nameGlcCer(d16:1/23:0)
Systematic nameN-(tricosanoyl)-1-beta-glucosyl-hexadecasphing-4-enine
SynonymsPubChem Synonyms
Sum CompositionGlcCer 39:1;O2 View other entries in RefMet with this sum composition
Exact mass769.643169 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC45H87NO8View other entries in RefMet with this formula
Molecular descriptors
Molfile31084 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C45H87NO8/c1-3-5-7-9-11-13-15-16-17-18-19-20-21-22-23-25-27-29-31-33-35-41(49)46-38(37-53-45-44(52)43(51)42(50)40(36-47)5
4-45)39(48)34-32-30-28-26-24-14-12-10-8-6-4-2/h32,34,38-40,42-45,47-48,50-52H,3-31,33,35-37H2,1-2H3,(H,46,49)/b34-32+/t38-,39+,40+
,42+,43-,44+,45+/m0/s1
InChIKeyMSZQSWVREFSSOB-VNIHTYSBSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCCCCCCCCCCCCC(=O)N[C@@H](CO[C@H]1C(C([C@@H]([C@@H](CO)O1)O)O)O)[C@@H](/C=C/CCCCCCCCCCC)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSphingolipids
Main ClassGlycosphingolipids
Sub ClassHexCer (Hexosyl ceramides)
Distribution of GlcCer 16:1;O2/23:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting GlcCer 16:1;O2/23:0
External Links
Pubchem CID52931252
LIPID MAPSLMSP0501AA31
KEGG IDC01190
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving GlcCer 16:1;O2/23:0

Rxn IDKEGG ReactionEnzyme
R01497 UDP-glucose + N-Acylsphingosine <=> UDP + GlucosylceramideUDP-glucose:N-acylsphingosine D-glucosyltransferase
R01498 Glucosylceramide + H2O <=> D-Glucose + N-AcylsphingosineD-Glucosyl-N-acylsphingosine glucohydrolase
R03354 Glucosylceramide + UDP-alpha-D-galactose <=> Lactosylceramide + UDPUDP-alpha-D-galactose:beta-D-glucosyl-(1<->1)-ceramide 4-beta-D-galactosyltransferase
R03355 Lactosylceramide + H2O <=> Glucosylceramide + D-Galactosebeta-D-Galactosyl-1,4-beta-D-glucosylceramide galactohydrolase

Table of KEGG human pathways containing GlcCer 16:1;O2/23:0

Pathway IDHuman Pathway# of reactions
hsa00600 Sphingolipid metabolism 4
  logo