#METABOLOMICS WORKBENCH Jianzhi.Hu@pnnl.gov_20160811_210358 DATATRACK_ID:701 STUDY_ID:ST000478 ANALYSIS_ID:AN000744 PROJECT_ID:PR000364 VERSION 1 CREATED_ON August 23, 2016, 11:34 am #PROJECT PR:PROJECT_TITLE NMR based Metabolomics Analysis of Liver from C57BL/6 Mouse Exposed to Ionizing PR:PROJECT_TITLE Radiation PR:PROJECT_SUMMARY Tissue extracts from ionizing readiation exposed mouse liver and controls were PR:PROJECT_SUMMARY compared via NMR based metabolomic analysis PR:INSTITUTE Pacific Northwest National Laboratory PR:DEPARTMENT Fundamental & Computational Sciences PR:LAST_NAME Hu PR:FIRST_NAME Jianzhi PR:ADDRESS Pacific Northwest National Laboratory, Richland, WA 99352 PR:EMAIL Jianzhi.Hu@pnnl.gov PR:PHONE +1 (509) 371-6544 #STUDY ST:STUDY_TITLE NMR based Metabolomics Analysis of Liver from C57BL/6 Mouse Exposed to Ionizing ST:STUDY_TITLE Radiation ST:STUDY_SUMMARY Tissue extracts from ionizing readiation exposed mouse liver and controls were ST:STUDY_SUMMARY compared via NMR based metabolomic analysis ST:INSTITUTE Pacific Northwest National Laboratory ST:DEPARTMENT Fundamental & Computational Sciences ST:LAST_NAME Hu ST:FIRST_NAME Jianzhi ST:ADDRESS Pacific Northwest National Laboratory, Richland, WA 99352 ST:EMAIL Jianzhi.Hu@pnnl.gov ST:PHONE +1 (509) 371-6544 #SUBJECT SU:SUBJECT_TYPE Animal SU:SUBJECT_SPECIES Mus musculus #SUBJECT_SAMPLE_FACTORS: SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Additional sample data SUBJECT_SAMPLE_FACTORS - G041 days post exposure to radiation:4 | radiation dose:- | radiation source:sham SUBJECT_SAMPLE_FACTORS - G042 days post exposure to radiation:4 | radiation dose:- | radiation source:sham SUBJECT_SAMPLE_FACTORS - G043 days post exposure to radiation:4 | radiation dose:- | radiation source:sham SUBJECT_SAMPLE_FACTORS - G044 days post exposure to radiation:4 | radiation dose:- | radiation source:sham SUBJECT_SAMPLE_FACTORS - G341 days post exposure to radiation:4 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G342 days post exposure to radiation:4 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G343 days post exposure to radiation:4 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G344 days post exposure to radiation:4 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G345 days post exposure to radiation:4 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G741 days post exposure to radiation:4 | radiation dose:7.8 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G742 days post exposure to radiation:4 | radiation dose:7.8 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G743 days post exposure to radiation:4 | radiation dose:7.8 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G744 days post exposure to radiation:4 | radiation dose:7.8 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G011 days post exposure to radiation:11 | radiation dose:- | radiation source:sham SUBJECT_SAMPLE_FACTORS - G012 days post exposure to radiation:11 | radiation dose:- | radiation source:sham SUBJECT_SAMPLE_FACTORS - G013 days post exposure to radiation:11 | radiation dose:- | radiation source:sham SUBJECT_SAMPLE_FACTORS - G014 days post exposure to radiation:11 | radiation dose:- | radiation source:sham SUBJECT_SAMPLE_FACTORS - G311 days post exposure to radiation:11 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G312 days post exposure to radiation:11 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G313 days post exposure to radiation:11 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G314 days post exposure to radiation:11 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G315 days post exposure to radiation:11 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - P311 days post exposure to radiation:11 | radiation dose:3.0 | radiation source:proton SUBJECT_SAMPLE_FACTORS - P312 days post exposure to radiation:11 | radiation dose:3.0 | radiation source:proton SUBJECT_SAMPLE_FACTORS - P313 days post exposure to radiation:11 | radiation dose:3.0 | radiation source:proton SUBJECT_SAMPLE_FACTORS - P314 days post exposure to radiation:11 | radiation dose:3.0 | radiation source:proton SUBJECT_SAMPLE_FACTORS - P315 days post exposure to radiation:11 | radiation dose:3.0 | radiation source:proton #COLLECTION CO:COLLECTION_SUMMARY Livers were dissected and snap-frozen at -80°C before NMR spectroscopy and CO:COLLECTION_SUMMARY morphology analysis. #TREATMENT TR:TREATMENT_SUMMARY A total of 27 seven-week-old C57BL/6 female mice randomly into 6 groups, and TR:TREATMENT_SUMMARY then whole body being exposed to either gamma or proton radiation. The TR:TREATMENT_SUMMARY individually housed animals were fed a standard diet and maintained in an TR:TREATMENT_SUMMARY environment controlled facility with an ambient temperature of 22-25°C and 45% TR:TREATMENT_SUMMARY relative humidity on 12 h light-dark cycle. Mice were exposed to whole body TR:TREATMENT_SUMMARY gamma radiation using a high-activity source (1250 keV 60Co) with the linear TR:TREATMENT_SUMMARY energy transfer (LET) associated with these fields in the range of 0.2-2 TR:TREATMENT_SUMMARY keV/μm. The mice were isolated in the corner of their polymer cages and placed TR:TREATMENT_SUMMARY a minimum of 100 cm from the collimated 6000 Ci (222 TBq) 60Co source, and then TR:TREATMENT_SUMMARY irradiation to the proposed dosage, respectively. The result of absorbed dose TR:TREATMENT_SUMMARY rate at a depth of approximately 600 mg/cm2 were ~0.83 Gy/min relative to TR:TREATMENT_SUMMARY tissue. After irradiation the isolation barrier was removed and mice were TR:TREATMENT_SUMMARY transferred to Animal Facility.Mice placed into aerated polystyrene boxes TR:TREATMENT_SUMMARY immediately before exposure to the entrance region of proton at the BNL TR:TREATMENT_SUMMARY Alternating Gradient Synchrotron (AGS) (1055 MeV/nucleon at the target, with a TR:TREATMENT_SUMMARY track-averaged LET =148.2 keV/μm at target). Doses of 0 and 3.0 Gy were TR:TREATMENT_SUMMARY delivered to a maximum of four mice at ~0.83 Gy/min in a single fraction. All TR:TREATMENT_SUMMARY procedures (i.e., placement in aerated boxes and subsequent tissue harvesting) TR:TREATMENT_SUMMARY for the control mice were identical to those of irradiated animals, except that TR:TREATMENT_SUMMARY they received no radiation. #SAMPLEPREP SP:SAMPLEPREP_SUMMARY "Step 1: After randomization of the samples, every preweighted intact frozen SP:SAMPLEPREP_SUMMARY liver tissue was homogenized by a Tissue Tearsor (Model 985-370, BioSpec SP:SAMPLEPREP_SUMMARY Product, Inc.) in ice-cold after adding 4 ml MeOH and 0.85 ml deionized H2O per SP:SAMPLEPREP_SUMMARY gram of liver tissue, followed by vortexing the mixture and then 2 ml chloroform SP:SAMPLEPREP_SUMMARY per gram of tissue was added and vortexed again. This process took 6 minutes and SP:SAMPLEPREP_SUMMARY kept exactly the same for each sample. Step 2: 2 ml chloroform and 2 ml SP:SAMPLEPREP_SUMMARY deionized H2O per gram of tissue were added in the mixture then vortexed again, SP:SAMPLEPREP_SUMMARY followed by transferring the different layers into glass vials separately with SP:SAMPLEPREP_SUMMARY syringes after the mixture (in ice bath) centrifuged. Finally, the solvents of SP:SAMPLEPREP_SUMMARY hydrophilic metabolites were removed by employing lyophilizer and then stored at SP:SAMPLEPREP_SUMMARY -80oC freezer before NMR spectral measurements." #CHROMATOGRAPHY CH:CHROMATOGRAPHY_TYPE - CH:INSTRUMENT_NAME - CH:COLUMN_NAME - #ANALYSIS AN:ANALYSIS_TYPE NMR #NMR NM:INSTRUMENT_NAME Varian INOVA 800 NM:INSTRUMENT_TYPE FT-NMR NM:NMR_EXPERIMENT_TYPE 1D-1H NM:SPECTROMETER_FREQUENCY 800MHz #NMR_METABOLITE_DATA NMR_METABOLITE_DATA:UNITS µM/mg NMR_METABOLITE_DATA_START metabolite_name G041 G042 G043 G044 G341 G342 G343 G344 G345 G741 G742 G743 G744 G011 G012 G013 G014 G311 G312 G313 G314 G315 P311 P312 P313 P314 P315 1,3-Diaminopropane 0.414 0.423 0.431 0.414 0.414 0.439 0.506 0.486 0.492 0.401 0.395 0.502 0.488 0.499 0.507 0.483 0.449 0.637 0.678 0.649 0.542 0.538 0.396 0.388 0.384 0.429 0.419 2-Oxobutyrate 0.180 0.213 0.155 0.203 0.190 0.209 0.209 0.197 0.210 0.159 0.122 0.151 0.119 0.177 0.165 0.153 0.170 0.191 0.180 0.209 0.177 0.146 0.116 0.141 0.141 0.121 0.142 3-Hydroxybutyrate 3.513 3.480 2.907 3.568 2.509 2.345 2.535 2.436 2.407 0.876 0.761 0.835 0.660 2.477 1.871 2.514 2.689 2.206 1.740 2.254 2.192 1.808 0.622 0.548 0.789 0.900 0.961 4-Hydroxyphenylacetate 0.108 0.099 0.097 0.114 0.171 0.194 0.156 0.203 0.151 0.177 0.184 0.179 0.170 0.053 0.051 0.051 0.052 0.113 0.111 0.103 0.094 0.105 0.157 0.141 0.181 0.161 0.207 ADP 0.669 0.510 0.456 0.601 0.424 0.594 0.534 0.601 0.508 0.472 0.441 0.504 0.511 0.361 0.404 0.399 0.338 0.708 0.589 0.700 0.695 0.665 0.419 0.694 0.574 0.490 0.501 AMP 1.097 0.995 0.449 0.997 0.421 0.533 0.553 0.532 0.401 0.226 0.253 0.407 0.305 0.790 0.923 1.030 0.508 1.020 0.604 1.106 0.791 0.867 0.490 0.480 0.566 0.465 0.529 ATP 0.534 0.381 0.551 0.509 0.463 0.503 0.445 0.486 0.454 0.920 0.619 0.882 0.869 0.395 0.260 0.378 0.387 0.633 0.458 0.518 0.577 0.632 0.504 0.462 0.521 0.523 0.659 Adenosine 0.567 0.502 0.502 0.616 0.359 0.472 0.454 0.423 0.335 0.273 0.436 0.295 0.286 0.269 0.239 0.351 0.354 0.600 0.395 0.602 0.536 0.443 1.024 0.673 0.709 1.023 0.977 Alanine 6.865 6.594 4.704 6.670 5.487 6.714 6.441 6.798 6.413 10.380 10.853 10.055 8.214 4.621 3.124 4.450 3.790 4.868 5.782 5.312 5.283 5.576 8.367 10.682 14.054 10.333 11.235 Allantoin 0.228 0.252 0.215 0.193 0.257 0.216 0.222 0.317 0.163 0.619 0.425 0.411 0.545 0.511 0.408 0.610 0.210 0.299 0.214 0.274 0.240 0.304 0.442 0.456 0.556 0.548 0.678 Arginine 2.453 2.847 2.916 2.161 3.118 2.704 3.079 3.364 2.645 2.876 3.383 2.584 2.874 1.253 1.069 1.174 1.197 2.100 1.777 2.961 1.814 2.303 1.401 1.624 1.414 1.811 2.295 Aspartate 1.062 0.700 0.670 0.771 0.617 0.562 0.669 0.674 0.762 1.213 0.653 0.877 0.610 0.578 0.571 0.465 0.492 1.006 0.811 0.777 1.010 0.925 1.103 0.931 0.885 0.985 0.654 Betaine 0.896 0.772 0.697 0.608 2.284 2.200 3.195 2.653 2.383 2.602 3.176 3.636 3.234 0.768 0.466 0.709 0.544 1.457 1.634 1.593 1.610 1.616 2.575 3.296 3.276 2.380 2.543 Carnitine 1.752 1.275 1.650 1.564 1.900 2.049 2.079 1.787 1.706 0.981 1.238 1.245 1.210 1.521 1.145 1.483 1.689 1.553 1.510 1.819 1.431 1.314 1.803 1.195 1.525 1.704 1.192 Cholate 0.623 0.567 0.458 0.613 0.515 0.494 0.440 0.503 0.347 0.336 0.302 0.268 0.324 0.754 0.361 0.688 0.541 0.866 0.706 0.710 0.593 0.847 0.386 0.310 0.290 0.336 0.527 Choline 0.652 0.537 0.496 0.547 0.142 0.154 0.169 0.174 0.236 0.120 0.112 0.187 0.174 1.016 0.853 1.009 0.711 0.225 0.205 0.218 0.198 0.198 0.139 0.132 0.151 0.126 0.130 Citrate 0.050 0.057 0.066 0.079 0.124 0.180 0.126 0.121 0.131 0.171 0.130 0.177 0.145 0.061 0.070 0.093 0.079 0.140 0.116 0.136 0.124 0.138 0.079 0.074 0.122 0.089 0.074 Creatine 0.124 0.158 0.128 0.137 0.129 0.201 0.228 0.157 0.155 0.155 0.171 0.142 0.173 0.084 0.081 0.090 0.098 0.140 0.113 0.149 0.149 0.120 0.099 0.102 0.109 0.101 0.109 Creatine phosphate 0.545 0.381 0.314 0.487 0.481 0.387 0.570 0.526 0.524 0.247 0.418 0.422 0.234 0.562 0.366 0.562 0.505 0.541 0.418 0.600 0.471 0.622 0.281 0.613 0.491 0.442 0.596 Creatinine 0.145 0.171 0.139 0.195 0.177 0.283 0.256 0.261 0.165 0.244 0.217 0.317 0.334 0.047 0.046 0.051 0.046 0.213 0.207 0.202 0.133 0.127 0.139 0.171 0.170 0.141 0.165 Ethanolamine 0.834 0.601 0.869 1.004 0.513 1.134 1.287 1.260 1.349 0.915 1.072 1.397 1.294 0.986 0.945 0.898 0.652 1.873 1.641 1.847 1.382 1.515 0.734 0.967 0.613 0.698 0.915 Fumarate 0.050 0.062 0.040 0.072 0.019 0.022 0.051 0.045 0.044 0.070 0.057 0.080 0.069 0.061 0.027 0.066 0.056 0.037 0.046 0.032 0.064 0.046 0.096 0.045 0.055 0.048 0.047 GTP 0.516 0.653 0.456 0.539 0.475 0.540 0.562 0.465 0.417 0.432 0.380 0.494 0.399 0.312 0.314 0.381 0.370 0.441 0.330 0.391 0.339 0.371 0.257 0.290 0.393 0.289 0.311 Glucose 53.472 52.446 37.949 46.338 28.384 77.395 58.333 70.239 70.752 62.437 57.509 56.749 58.930 33.293 32.774 33.655 24.856 55.581 60.525 57.295 59.769 66.360 60.625 71.850 66.082 71.700 74.059 Glucose-6-phosphate 2.894 2.599 2.447 2.463 3.523 3.605 4.028 5.593 3.774 5.955 5.127 4.667 5.325 2.719 2.381 2.342 2.525 1.525 1.699 1.487 1.622 1.778 6.825 5.188 3.763 4.972 4.350 Glutamate 3.126 3.082 2.998 3.199 3.647 3.250 3.397 3.831 3.310 4.633 2.637 4.232 2.853 2.483 1.859 2.252 2.554 3.452 2.483 3.096 2.655 3.294 2.666 2.444 2.797 2.806 2.552 Glutamine 2.203 2.126 2.325 2.363 3.220 2.898 2.952 2.985 3.175 6.901 5.606 7.889 3.444 1.976 1.711 2.102 1.882 6.728 6.515 8.798 7.694 9.440 8.303 7.784 7.906 8.406 7.641 Glutathione 6.468 7.106 5.075 6.474 9.698 11.231 11.326 8.740 8.008 15.129 12.511 11.591 11.631 4.381 4.276 5.042 4.869 7.290 7.754 7.611 7.356 8.528 10.516 12.708 13.673 10.471 10.253 Glycerol 1.743 1.955 2.420 1.822 2.173 2.011 1.796 2.028 1.966 2.222 1.925 2.375 2.201 1.236 1.096 1.246 1.361 2.201 2.452 1.452 1.363 1.228 1.863 1.387 1.445 1.615 1.130 Glycolate 0.625 0.829 0.566 0.884 0.868 0.742 0.736 0.746 0.706 0.453 0.691 0.708 0.499 0.605 0.368 0.628 0.485 0.956 0.920 0.924 0.801 0.795 0.604 0.794 0.875 0.698 0.684 Histidine 0.031 0.027 0.042 0.028 0.032 0.022 0.029 0.023 0.020 0.074 0.067 0.065 0.062 0.026 0.042 0.036 0.043 0.015 0.022 0.016 0.014 0.019 0.031 0.017 0.009 0.010 0.023 Hypoxanthine 0.261 0.238 0.319 0.324 0.276 0.352 0.201 0.277 0.296 0.242 0.184 0.267 0.165 0.220 0.214 0.219 0.243 0.260 0.221 0.223 0.349 0.311 0.183 0.244 0.198 0.159 0.197 IMP 0.458 0.463 0.321 0.366 0.402 0.349 0.413 0.450 0.347 0.336 0.287 0.448 0.425 0.379 0.291 0.333 0.302 0.373 0.277 0.357 0.317 0.348 0.274 0.367 0.249 0.279 0.274 Inosine 0.112 0.109 0.100 0.104 0.134 0.143 0.101 0.176 0.091 0.138 0.081 0.073 0.111 0.110 0.089 0.117 0.089 0.118 0.108 0.097 0.088 0.135 0.077 0.082 0.116 0.105 0.104 Isobutyrate 0.087 0.119 0.088 0.111 0.140 0.110 0.101 0.125 0.121 0.140 0.129 0.128 0.146 0.118 0.119 0.126 0.138 0.147 0.123 0.139 0.124 0.142 0.088 0.086 0.090 0.081 0.087 Isoleucine 0.561 0.458 0.493 0.578 0.839 0.798 0.653 0.702 0.516 0.482 0.510 0.509 0.447 0.385 0.321 0.408 0.344 0.482 0.506 0.437 0.410 0.420 0.527 0.493 0.426 0.410 0.370 Lactate 11.234 12.938 10.086 12.900 11.081 16.827 14.094 15.458 15.595 12.519 18.932 17.021 15.794 8.591 5.287 7.547 5.311 8.494 10.475 7.349 7.578 9.538 15.948 24.689 24.685 21.848 30.502 Leucine 1.327 0.911 0.947 1.057 1.402 1.436 1.213 1.436 0.958 1.081 1.040 1.028 0.895 0.843 0.581 0.850 0.652 0.948 0.812 0.863 0.788 0.802 0.922 0.901 0.894 0.833 0.763 Lysine 1.116 0.688 1.124 0.693 0.892 1.131 1.038 1.202 0.891 1.075 1.076 0.875 0.987 0.784 0.721 0.910 0.790 0.737 0.873 0.940 0.797 0.880 1.005 0.973 0.833 0.731 0.838 Malate 0.712 0.488 0.478 0.809 0.714 0.794 1.140 0.841 1.349 1.910 1.533 1.248 1.293 0.872 0.828 0.700 0.646 1.085 1.111 0.966 1.225 1.224 1.807 1.586 1.699 1.401 0.980 Maltose 0.708 0.438 0.259 0.675 0.412 0.608 1.094 1.128 0.442 1.196 0.677 0.927 0.878 0.409 0.378 0.417 0.275 0.610 0.638 0.606 0.669 0.577 1.227 0.911 1.385 1.644 1.225 Mannitol 1.265 1.656 1.597 1.413 2.203 2.346 2.385 2.212 2.923 2.348 2.089 1.588 1.805 3.843 3.899 4.483 3.367 1.746 1.917 1.732 1.660 1.731 1.600 1.769 1.945 1.937 2.098 Mannose 0.275 0.191 0.137 0.279 0.143 0.288 0.282 0.304 0.290 0.379 0.269 0.285 0.314 0.265 0.259 0.324 0.269 0.411 0.356 0.380 0.406 0.408 0.440 0.341 0.441 0.432 0.441 NAD+ 0.772 1.045 0.896 0.783 0.629 1.013 0.853 0.731 0.845 0.700 0.896 0.970 1.123 0.497 0.675 0.607 0.459 0.647 0.650 0.388 0.585 0.641 0.577 0.851 0.565 0.633 0.731 NADH 0.114 0.178 0.113 0.120 0.329 0.338 0.202 0.148 0.298 0.085 0.061 0.096 0.071 0.065 0.062 0.042 0.036 0.197 0.189 0.174 0.172 0.193 0.031 0.036 0.031 0.034 0.034 NADP+ 0.317 0.267 0.133 0.303 0.250 0.396 0.337 0.340 0.222 0.292 0.272 0.231 0.244 0.208 0.225 0.234 0.197 0.349 0.163 0.280 0.140 0.292 0.174 0.183 0.135 0.213 0.257 NADPH 0.149 0.151 0.124 0.118 0.088 0.084 0.077 0.078 0.093 0.093 0.113 0.164 0.087 0.061 0.034 0.057 0.049 0.102 0.113 0.068 0.093 0.070 0.130 0.140 0.142 0.167 0.168 Niacinamide 0.178 0.168 0.173 0.282 0.182 0.120 0.180 0.203 0.196 0.238 0.271 0.368 0.317 0.222 0.126 0.294 0.207 0.158 0.174 0.175 0.184 0.201 0.238 0.239 0.271 0.265 0.194 Nicotinic acid adenine dinucleotide 0.025 0.037 0.024 0.041 0.031 0.023 0.035 0.022 0.038 0.035 0.024 0.014 0.016 0.037 0.025 0.030 0.036 0.016 0.021 0.021 0.026 0.032 0.019 0.025 0.011 0.016 0.015 O-Acetylcarnitine 0.101 0.106 0.080 0.129 0.132 0.153 0.183 0.133 0.123 0.121 0.146 0.142 0.187 0.134 0.123 0.147 0.141 0.171 0.182 0.233 0.215 0.210 0.261 0.306 0.259 0.260 0.212 O-Phosphocholine 0.712 0.851 0.761 1.238 0.508 0.585 0.590 0.461 0.548 0.397 0.431 0.289 0.392 1.306 1.153 1.420 1.128 0.305 0.389 0.338 0.372 0.407 0.673 0.788 0.884 0.821 0.870 O-Phosphoethanolamine 1.213 1.450 1.296 1.230 2.757 2.414 2.846 2.745 2.405 2.678 2.312 2.736 2.724 2.711 2.466 2.667 2.505 3.131 2.764 3.314 2.677 2.822 2.803 2.492 2.825 3.068 2.812 Oxypurinol 0.458 0.426 0.442 0.464 0.710 0.996 0.735 0.887 0.665 0.432 0.696 0.284 0.313 0.489 0.452 0.505 0.456 0.982 0.983 0.909 0.519 0.569 0.718 1.111 0.787 1.122 1.221 Phenylalanine 0.209 0.173 0.173 0.155 0.187 0.253 0.236 0.234 0.200 0.195 0.218 0.189 0.189 0.132 0.105 0.171 0.121 0.158 0.170 0.149 0.137 0.150 0.203 0.215 0.178 0.169 0.177 S-Adenosylhomocysteine 0.176 0.186 0.150 0.191 0.167 0.202 0.198 0.180 0.204 0.169 0.205 0.162 0.168 0.147 0.099 0.159 0.111 0.161 0.156 0.122 0.132 0.144 0.103 0.167 0.112 0.114 0.140 Saccharopine 1.996 1.762 1.241 1.154 1.352 1.242 1.456 1.201 1.216 1.262 1.476 1.319 1.293 1.238 0.985 1.306 0.941 1.475 1.016 1.078 1.701 1.731 1.343 1.076 1.281 1.552 1.148 Serine 1.226 2.198 1.310 1.375 1.666 1.792 1.496 1.601 1.357 2.089 1.601 2.368 1.703 1.389 1.144 1.216 1.416 1.914 2.338 2.461 2.126 2.530 1.357 2.184 2.555 1.494 1.688 Succinate 2.580 2.834 2.128 2.607 2.245 2.543 2.397 2.580 2.244 3.487 2.494 2.900 2.531 1.499 1.195 1.291 1.384 2.189 2.261 1.875 1.927 2.187 3.061 3.090 2.916 3.110 2.531 Threonine 2.783 2.864 3.250 2.747 2.983 3.910 3.154 3.732 2.887 3.063 2.761 3.049 3.265 2.240 1.999 2.090 2.302 2.534 2.618 2.248 2.101 2.293 2.866 2.652 3.288 3.610 3.910 Trimethylamine 0.122 0.101 0.082 0.109 0.128 0.136 0.152 0.150 0.159 0.141 0.133 0.127 0.103 0.073 0.121 0.096 0.079 0.123 0.116 0.071 0.088 0.108 0.048 0.047 0.037 0.042 0.029 Trimethylamine N-oxide 2.143 2.089 1.792 1.761 0.703 0.732 0.712 0.828 0.702 0.492 0.799 0.688 0.486 1.277 1.240 1.123 1.282 1.004 0.736 0.633 0.784 0.734 0.595 0.750 0.733 0.620 0.856 Tryptophan 0.072 0.054 0.053 0.076 0.069 0.064 0.065 0.078 0.065 0.076 0.059 0.072 0.073 0.043 0.034 0.060 0.049 0.063 0.055 0.064 0.066 0.065 0.064 0.061 0.056 0.059 0.051 UDP-N-Acetylglucosamine 0.366 0.349 0.310 0.261 0.248 0.177 0.153 0.152 0.119 0.183 0.184 0.223 0.246 0.324 0.179 0.369 0.226 0.097 0.165 0.107 0.119 0.130 0.181 0.302 0.360 0.133 0.188 UDP-galactose 0.758 0.656 0.427 0.583 0.249 0.386 0.407 0.545 0.427 0.483 0.459 0.521 0.569 0.301 0.361 0.363 0.344 0.625 0.427 0.595 0.438 0.349 0.420 0.445 0.561 0.503 0.489 UDP-glucose 0.211 0.332 0.226 0.213 0.329 0.346 0.341 0.338 0.327 0.262 0.246 0.372 0.286 0.279 0.196 0.363 0.334 0.444 0.506 0.412 0.359 0.393 0.253 0.413 0.571 0.421 0.291 UDP-glucuronate 0.172 0.181 0.228 0.195 0.129 0.146 0.135 0.177 0.135 0.221 0.159 0.187 0.271 0.271 0.165 0.123 0.151 0.235 0.142 0.200 0.218 0.160 0.220 0.328 0.306 0.282 0.329 Uridine 0.230 0.458 0.237 0.343 0.429 0.573 0.403 0.553 0.502 0.497 0.508 0.317 0.326 0.132 0.106 0.138 0.121 0.317 0.283 0.229 0.192 0.200 0.263 0.211 0.288 0.258 0.265 Valine 1.298 0.757 0.759 0.909 1.059 1.185 0.965 0.937 0.823 0.767 0.971 0.860 0.824 0.639 0.453 0.688 0.413 0.688 0.605 0.614 0.609 0.599 0.791 0.722 0.552 0.554 0.532 myo-Inositol 0.623 0.921 0.865 0.889 0.929 0.881 0.691 0.965 0.690 0.650 0.574 0.855 0.903 0.692 0.643 0.664 0.666 0.861 0.973 0.675 0.586 0.706 0.686 0.766 0.765 0.793 0.572 sn-Glycero-3-phosphocholine 0.994 0.864 1.093 0.845 0.886 0.786 0.994 0.897 0.810 0.543 0.560 0.500 0.534 1.169 1.169 1.577 1.144 1.403 1.080 1.555 1.179 1.296 0.455 0.376 0.353 0.394 0.276 β-Alanine 2.526 2.782 2.522 2.380 1.525 1.774 1.428 2.118 1.651 2.647 1.699 1.970 2.358 2.554 2.554 3.402 2.689 2.110 2.048 1.729 1.935 1.740 1.864 1.994 1.748 1.842 1.772 τ-Methylhistidine 0.416 0.384 0.458 0.455 0.315 0.418 0.506 0.443 0.391 0.448 0.604 0.483 0.447 0.409 0.295 0.375 0.587 0.714 0.515 0.529 0.656 0.602 0.510 0.753 0.495 0.473 0.709 NMR_METABOLITE_DATA_END #METABOLITES METABOLITES_START metabolite_name PubChem ID KEGG ID 1,3-Diaminopropane 428 C00986 2-Oxobutyrate 51 C00026 3-Hydroxybutyrate 441 C01089 4-Hydroxyphenylacetate 127 C00642 ADP 6022 C00008 AMP 6083 C00020 ATP 5957 C00002 Adenosine 60961 C00212 Alanine 5950 C00041 Allantoin 204 C01551 Arginine 6322 C00062 Aspartate 5960 C00049 Betaine 247 C00719 Carnitine 10917 C00318 Cholate 221493 C00695 Choline 305 C00114 Citrate 311 C00158 Creatine 586 C00300 Creatine phosphate 587 C02305 Creatinine 588 C00791 Ethanolamine 700 C00189 Fumarate 284 C00058 GTP 6830 C00044 Glucose 5793 C00031 Glucose-6-phosphate 5958 C00092 Glutamate 33032 C00025 Glutamine 5961 C00064 Glutathione 124886 C00051 Glycerol 753 C00116 Glycolate 757 C00160 Histidine 6274 C00135 Hypoxanthine 790 C00262 IMP 8582 C00130 Inosine 6021 C00294 Isobutyrate 6590 C02632 Isoleucine 6306 C00407 Lactate 107689 C00186 Leucine 6106 C00123 Lysine 5962 C00047 Malate 222656 C00149 Maltose 439186 C00208 Mannitol 6251 C00392 Mannose 18950 C00159 NAD+ 5893 C00003 NADH 439153 C00004 NADP+ 5886 C00006 NADPH 5884 C00005 Niacinamide 936 C00153 Nicotinic acid adenine dinucleotide 165490 C00857 O-Acetylcarnitine 18230 C02571 O-Phosphocholine 1014 C00588 O-Phosphoethanolamine 1015 C00346 Oxypurinol 4644 C07599 Phenylalanine 6140 C00079 S-Adenosylhomocysteine 439155 C00021 Saccharopine 160556 C00449 Serine 5951 C00065 Succinate 1110 C00042 Threonine 6288 C00188 Trimethylamine 1146 C00565 Trimethylamine N-oxide 1145 C01104 Tryptophan 6305 C00078 UDP-N-Acetylglucosamine 445675 C00043 UDP-galactose 18069 C00052 UDP-glucose 8629 C00029 UDP-glucuronate 17473 C00167 Uridine 6029 C00299 Valine 6287 C00183 myo-Inositol 892 C00137 sn-Glycero-3-phosphocholine 439285 C00670 β-Alanine 239 C00099 τ-Methylhistidine 92105 C01152 METABOLITES_END #END