#METABOLOMICS WORKBENCH xliu68_20220330_125443_mwtab.txt DATATRACK_ID:3145 STUDY_ID:ST002119 ANALYSIS_ID:AN003467 PROJECT_ID:PR001344 VERSION 1 CREATED_ON March 31, 2022, 8:01 am #PROJECT PR:PROJECT_TITLE MNK2 deficiency potentiates beta-cell regeneration via hypertranslation PR:PROJECT_SUMMARY Regenerating pancreatic beta-cells is a potential curative approach for PR:PROJECT_SUMMARY diabetes. We previously identified the small molecule CID661578 as a potent PR:PROJECT_SUMMARY inducer of beta-cell regeneration but its target and mechanism of action have PR:PROJECT_SUMMARY remained unknown. We now screened 257 million yeast clones and determined that PR:PROJECT_SUMMARY CID661578 targets MAP kinase-interacting serine/threonine kinase 2 (MNK2), an PR:PROJECT_SUMMARY interaction we genetically validated in vivo. CID661578 increased beta-cell PR:PROJECT_SUMMARY neogenesis from ductal cells in zebrafish, neonatal pig islet aggregates and PR:PROJECT_SUMMARY human pancreatic ductal organoids. Mechanistically, we found that CID661578 PR:PROJECT_SUMMARY boosts protein synthesis and regeneration by blocking MNK2 from binding eIF4G in PR:PROJECT_SUMMARY the translation initiation complex at the mRNA cap. Unexpectedly, this blocking PR:PROJECT_SUMMARY activity augmented eIF4E-phosphorylation depending on MNK1 and bolstered the PR:PROJECT_SUMMARY interaction between eIF4E and eIF4G, which is necessary for both PR:PROJECT_SUMMARY hypertranslation and beta-cell regeneration. Taken together, our findings PR:PROJECT_SUMMARY demonstrate a targetable role of MNK2-controlled translation in beta-cell PR:PROJECT_SUMMARY regeneration, a role that warrants further investigation in diabetes. PR:INSTITUTE North Carolina State University PR:LAST_NAME Liu PR:FIRST_NAME Xiaojing PR:ADDRESS Polk Hall, RM 128 PR:EMAIL xliu68@ncsu.edu PR:PHONE 9195154387 #STUDY ST:STUDY_TITLE Metabolomics analysis of zebrafish response to CID661578 treatment ST:STUDY_SUMMARY zebrafish larvae were treated with DMSO or CID661578 for 24 hours prior to ST:STUDY_SUMMARY global metabolomics analysis (n=6). Metabolites were extracted from pools of 10 ST:STUDY_SUMMARY zebrafish larvae at 5 dpf using a 80% methanol-based extraction method. Samples ST:STUDY_SUMMARY were dried in speed vac and stored in -80C freezer until ready for LC-MS ST:STUDY_SUMMARY analysis. ST:INSTITUTE North Carolina State University ST:LAST_NAME Liu ST:FIRST_NAME Xiaojing ST:ADDRESS Polk Hall, RM 128 ST:EMAIL xliu68@ncsu.edu ST:PHONE 9195154387 #SUBJECT SU:SUBJECT_TYPE Fish SU:SUBJECT_SPECIES Danio rerio SU:TAXONOMY_ID 7955 #SUBJECT_SAMPLE_FACTORS: SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Raw file names and additional sample data SUBJECT_SAMPLE_FACTORS - DMSO1 Treatment:Control RAW_FILE_NAME=DMSO1.raw SUBJECT_SAMPLE_FACTORS - DMSO2 Treatment:Control RAW_FILE_NAME=DMSO2.raw SUBJECT_SAMPLE_FACTORS - DMSO3 Treatment:Control RAW_FILE_NAME=DMSO3.raw SUBJECT_SAMPLE_FACTORS - DMSO4 Treatment:Control RAW_FILE_NAME=DMSO4.raw SUBJECT_SAMPLE_FACTORS - DMSO5 Treatment:Control RAW_FILE_NAME=DMSO5.raw SUBJECT_SAMPLE_FACTORS - DMSO6 Treatment:Control RAW_FILE_NAME=DMSO6.raw SUBJECT_SAMPLE_FACTORS - CID1 Treatment:CID661578 RAW_FILE_NAME=CID1.raw SUBJECT_SAMPLE_FACTORS - CID2 Treatment:CID661578 RAW_FILE_NAME=CID2.raw SUBJECT_SAMPLE_FACTORS - CID3 Treatment:CID661578 RAW_FILE_NAME=CID3.raw SUBJECT_SAMPLE_FACTORS - CID4 Treatment:CID661578 RAW_FILE_NAME=CID4.raw SUBJECT_SAMPLE_FACTORS - CID5 Treatment:CID661578 RAW_FILE_NAME=CID5.raw SUBJECT_SAMPLE_FACTORS - CID6 Treatment:CID661578 RAW_FILE_NAME=CID6.raw SUBJECT_SAMPLE_FACTORS - DMSO1_Pos Treatment:Control RAW_FILE_NAME=DMSO1_Pos.raw SUBJECT_SAMPLE_FACTORS - DMSO2_Pos Treatment:Control RAW_FILE_NAME=DMSO2_Pos.raw SUBJECT_SAMPLE_FACTORS - DMSO3_Pos Treatment:Control RAW_FILE_NAME=DMSO3_Pos.raw SUBJECT_SAMPLE_FACTORS - DMSO4_Pos Treatment:Control RAW_FILE_NAME=DMSO4_Pos.raw SUBJECT_SAMPLE_FACTORS - DMSO5_Pos Treatment:Control RAW_FILE_NAME=DMSO5_Pos.raw SUBJECT_SAMPLE_FACTORS - DMSO6_Pos Treatment:Control RAW_FILE_NAME=DMSO6_Pos.raw SUBJECT_SAMPLE_FACTORS - CID1_Pos Treatment:CID661578 RAW_FILE_NAME=CID1_Pos.raw SUBJECT_SAMPLE_FACTORS - CID2_Pos Treatment:CID661578 RAW_FILE_NAME=CID2_Pos.raw SUBJECT_SAMPLE_FACTORS - CID3_Pos Treatment:CID661578 RAW_FILE_NAME=CID3_Pos.raw SUBJECT_SAMPLE_FACTORS - CID4_Pos Treatment:CID661578 RAW_FILE_NAME=CID4_Pos.raw SUBJECT_SAMPLE_FACTORS - CID5_Pos Treatment:CID661578 RAW_FILE_NAME=CID5_Pos.raw SUBJECT_SAMPLE_FACTORS - CID6_Pos Treatment:CID661578 RAW_FILE_NAME=CID6_Pos.raw SUBJECT_SAMPLE_FACTORS - DMSO1_Neg Treatment:Control RAW_FILE_NAME=DMSO1_Neg.raw SUBJECT_SAMPLE_FACTORS - DMSO2_Neg Treatment:Control RAW_FILE_NAME=DMSO2_Neg.raw SUBJECT_SAMPLE_FACTORS - DMSO3_Neg Treatment:Control RAW_FILE_NAME=DMSO3_Neg.raw SUBJECT_SAMPLE_FACTORS - DMSO4_Neg Treatment:Control RAW_FILE_NAME=DMSO4_Neg.raw SUBJECT_SAMPLE_FACTORS - DMSO5_Neg Treatment:Control RAW_FILE_NAME=DMSO5_Neg.raw SUBJECT_SAMPLE_FACTORS - DMSO6_Neg Treatment:Control RAW_FILE_NAME=DMSO6_Neg.raw SUBJECT_SAMPLE_FACTORS - CID1_Neg Treatment:CID661578 RAW_FILE_NAME=CID1_Neg.raw SUBJECT_SAMPLE_FACTORS - CID2_Neg Treatment:CID661578 RAW_FILE_NAME=CID2_Neg.raw SUBJECT_SAMPLE_FACTORS - CID3_Neg Treatment:CID661578 RAW_FILE_NAME=CID3_Neg.raw SUBJECT_SAMPLE_FACTORS - CID4_Neg Treatment:CID661578 RAW_FILE_NAME=CID4_Neg.raw SUBJECT_SAMPLE_FACTORS - CID5_Neg Treatment:CID661578 RAW_FILE_NAME=CID5_Neg.raw SUBJECT_SAMPLE_FACTORS - CID6_Neg Treatment:CID661578 RAW_FILE_NAME=CID6_Neg.raw #COLLECTION CO:COLLECTION_SUMMARY zebrafish larvae were treated with DMSO or CID661578 for 24 hours prior to CO:COLLECTION_SUMMARY global metabolomics analysis (n=6). Metabolites were extracted from pools of 10 CO:COLLECTION_SUMMARY zebrafish larvae at 5 dpf using a 80% methanol/water-based extraction method. CO:COLLECTION_SUMMARY Detailed metabolite extraction was described previously using 80% methanol/water CO:COLLECTION_SUMMARY as solvent (PMID: 24410464, PMID: 24894601, PMID: 25795660) and dry pellets were CO:COLLECTION_SUMMARY stored in -80 °C freezer until ready for LC-MS analysis. Pellets were CO:COLLECTION_SUMMARY reconstituted into 30 μL of sample solvent (water:methanol:acetonitrile, 2:1:1, CO:COLLECTION_SUMMARY v/v), and 5 μL was injected into the LC-MS. CO:SAMPLE_TYPE new #TREATMENT TR:TREATMENT_SUMMARY Chemicals (DMSO orCID661578) were added to the E3 medium for larvae to reach TR:TREATMENT_SUMMARY final concentration of 10 uM. Pools of 10 wild-type (WT) larvae at 5 dpf were TR:TREATMENT_SUMMARY used for each of the 6 independent biological replicates for DMSO or CID661578 TR:TREATMENT_SUMMARY treatment from 4-5 dpf. #SAMPLEPREP SP:SAMPLEPREP_SUMMARY Intracellular metabolites were harvested as described previously using 80% SP:SAMPLEPREP_SUMMARY methanol/water as solvent (PMID: 24410464, PMID: 24894601, PMID: 25795660) and SP:SAMPLEPREP_SUMMARY dry pellets were stored in -80 °C freezer until ready for LC-MS analysis. For SP:SAMPLEPREP_SUMMARY metabolite analysis, pellets were reconstituted into 30 μL of sample solvent SP:SAMPLEPREP_SUMMARY (water:methanol:acetonitrile, 2:1:1, v/v), and 5 μL was injected into the SP:SAMPLEPREP_SUMMARY LC-MS. #CHROMATOGRAPHY CH:CHROMATOGRAPHY_SUMMARY HILIC method is for general metabolomics analysis. CH:CHROMATOGRAPHY_TYPE HILIC CH:INSTRUMENT_NAME Thermo Dionex Ultimate 3000 CH:COLUMN_NAME Waters Xbridge amide (100 × 2.1 mm i.d., 3.5 μm) #ANALYSIS AN:ANALYSIS_TYPE MS #MS MS:INSTRUMENT_NAME Thermo Q Exactive Plus Orbitrap MS:INSTRUMENT_TYPE Orbitrap MS:MS_TYPE ESI MS:ION_MODE POSITIVE MS:MS_COMMENTS It was operated in the full-scan mode (positive/negative switching) with the MS:MS_COMMENTS resolution set at 70 000 (at m/z 200).LC-MS data were analyzed using Sieve 2.0 MS:MS_COMMENTS (Thermo Scientific), and the integrated area under metabolite peak was used to MS:MS_COMMENTS compare the relative abundance of each metabolite in different samples in the MS:MS_COMMENTS same batch. #MS_METABOLITE_DATA MS_METABOLITE_DATA:UNITS ion counts MS_METABOLITE_DATA_START Samples DMSO1 DMSO2 DMSO3 DMSO4 DMSO5 DMSO6 CID1 CID2 CID3 CID4 CID5 CID6 Factors Treatment:Control Treatment:Control Treatment:Control Treatment:Control Treatment:Control Treatment:Control Treatment:CID661578 Treatment:CID661578 Treatment:CID661578 Treatment:CID661578 Treatment:CID661578 Treatment:CID661578 2-aminoacrylic acid 9244850.322 9977140.512 9645668.745 10329862.08 11114481.48 10894670.41 15172594.07 14480787.27 16194341.57 11146506.47 14860872.96 14424588.85 N-Methylethanolamine phosphate 1058409.738 1080977.439 1176786.615 1317183.546 1418910.099 1127708.802 1886562.075 2100170.586 2014020.495 1778464.257 1895807.382 1976814.954 creatinine 533469644.5 443387061.5 502954086.4 628264656.4 352422145.3 233197159.2 253724917.8 394753702.9 205137615.9 338908442.4 158730094.7 169154558.4 creatine 6760961066 6853183175 6784328709 6768126972 7349291481 7717364492 7118916834 7436679824 7466655957 6966350141 8034663174 7770288054 Phosphodimethylethanolamine 833938.152 688365.312 822152.424 921903.861 1084625.214 767894.253 1388696.892 1600093.779 1579492.572 1495598.484 1373068.617 1274809.665 5,6-dihydrothymine 3407093.262 3032190.468 3156279.027 3618401.094 3275806.65 2573205.225 2373404.715 2617943.571 2580167.823 2170676.925 2298607.845 1992281.538 2-deoxy-D-ribose 304526.007 407586.195 382481.937 372915.471 431874.918 335118.711 311529.759 228051.87 197616.615 54473.445 239044.797 141195.138 2-keto-4-methylthiobutyrate 1175728.491 1478443.347 1572429.558 1762332.801 1312776.45 1423701.603 1267637.853 1490199.171 1638362.712 1013517.519 1297235.481 1031509.899 L-cysteinylglycine 160855.347 13563.702 18754.575 36132.456 25506.24 28564.68 1000 12565.098 25041.51 1000 1000 1000 choline phosphate 752695473.6 661193789.5 574360803.1 854029502.9 837500093.1 836382191.3 652625022.8 858407614.6 710322743.5 737175704.1 813213290 717189548.8 Urocanate 9250171.725 10415245.44 13016961.94 14802101.68 8606846.757 7860689.4 7531645.071 10829004.94 11218174.23 30341569.58 7546778.049 12479376.47 Methylimidazoleacetic acid 19847874.85 16723384.38 27184165.12 20676407.43 21638670.27 21185981.13 13096054.64 10570324.25 14069335.74 13851189.29 7833032.664 9841787.799 4-Imidazolone-5-propanoate 53227.674 85894.749 62499.213 178742.598 96803.916 88116.705 3606990.213 5047003.011 3336125.649 10799990.39 4166468.331 4748125.209 D-Alanyl-D-alanine 1475562.063 2241472.455 1746893.814 1640040.279 1225731.51 1361852.013 1008464.061 1113242.16 833736.39 874169.649 724565.091 659668.095 citr_L[e] 15887212.14 17145857.69 19316678.46 18202205.3 16887352.48 15736185.32 16421791.88 17661938.85 16464276.38 20295654.89 16448534.24 15002264.62 D-Glucosamine 12230.433 1000 1000 1000 1000 1000 27762.192 9902.553 1000 1000 1000 1000 benzoate 16957782.39 26587880.34 27168233.6 18432645.6 23591689.22 17897229.01 39348155.26 35340442.87 36914085.52 25887591.74 31095845.36 31479888.12 4-trimethylammoniobutanal 108091.956 37660.356 33126.588 45256.155 20621.538 17575.089 48707.742 64622.298 60690.57 67790.421 42119.316 24423.204 anthranilate 10476495.14 9216394.635 10092571.28 10912977.05 10725558.52 12327686.57 3582346.116 3461075.439 3272315.604 3069829.254 3710237.049 3542774.301 N(2)-acetyl-L-ornithine 4388008.182 6731824.893 10136545.61 6207845.055 6216693.501 4412711.454 5834212.446 6710306.397 7720320.213 8886213.819 4627483.218 5398795.935 2-phenylethanamine 987503.4 842308.059 853622.901 786500.484 945251.886 1024160.049 349867.86 291832.131 247765.17 277022.82 392104.029 346265.463 dopaminochrome 2060675.085 1567773.891 2875059.255 2539455.519 2991625.383 2666047.323 2045705.394 2303102.811 1578596.097 1433235.912 2465582.94 2918077.449 Pyridoxal 1512380.802 1371728.814 3489822.165 2752642.974 4046210.73 3450678.813 2688260.193 3294314.754 2017915.911 2163964.473 3564118.575 4461353.28 sn-Glycero-3-phosphocholine 324560155.9 600756985.7 731223577.6 405283179.4 470386186.1 383987359.1 745066197.8 688383809.5 886913737.2 379959401.1 424431095.8 482935610.2 5-amino-1-(5-phospho-D-ribosyl)imidazole 1000 26667.792 37614.681 12762.126 22538.028 1000 1000 1000 69243.762 58430.118 10675.92 40996.626 coumarin 8885519.313 12889292.9 13796932.14 9279369.756 11554148.59 9300492.537 20480124.52 17604027.89 18365106.75 12868384.71 15281147.97 15337841.78 N6N6N6-Trimethyl-L-lysine 20312249.9 27074823.21 32245551.72 20599173.28 22550997.09 21674558.19 50892531.66 50883083.3 54520623.79 121293060.7 41316088.31 43608665.8 L-Alanyl-L-leucine 35133352.44 32271377.28 55010422.24 39013938.26 32661287.16 33631719.68 43117558.26 49654782.27 43211677.84 31198237.56 35750730.89 36976038.52 3-Hydroxy-N6N6N6-trimethyl-L-lysine 349814.655 509758.83 491099.922 466712.226 432384.882 455809.818 558386.598 528703.833 415519.899 504550.689 522010.479 467919.537 C9H13N5O3(4) 5819546.541 5070927.252 5890159.506 5085736.377 6807309.168 6046437.372 5214572.562 5466487.947 5623243.665 2319905.784 5282310.882 3649232.325 N-methyl-467-trihydroxy-1234-tetrahydroisoquinoline 26783.64 68441.292 8833.851 8250.72 1000 22996.467 33604.041 49871.718 35068.887 52141.767 1000 9714.36 xanthosine 44923.056 95971.725 81418.914 78166.062 79312.476 58586.412 453937.479 349735.344 327779.196 835005.684 297902.448 274572.96 glutathione 30845396.58 9177726.603 8747732.511 10003433.62 9529450.707 11658451.29 4064825.889 5210904.783 12064210.78 4211676.837 6993293.211 4190063.988 beta-carboline 339965.061 131072.379 307925.988 185267.484 149218.824 190435.44 581576.145 442146.48 671312.919 809111.202 394034.619 458997.933 N1,N12-diacetylspermidine 111290.148 241100.871 445612.179 147004.065 150324.732 170287.575 339967.665 247488.873 230101.065 1106461.623 193108.965 156277.602 lysyl-proline 615084.9 1484202.822 2035749.813 521506.821 723923.592 465540.264 3223598.412 1965925.368 2236138.575 3852449.04 1228514.406 1772559.999 N-Ribosylnicotinamide 22612211.55 28782788.31 27895211.25 21747586.94 22511972.43 22135902.72 25020202.61 22687386.03 26384380.87 18850522.01 23021514.43 22212027.24 3,5-dihydroxy-3,4-dihydro-1,4-benzothiazine 0 0 0 0 0 0 0 0 0 0 0 0 5-Methylthioadenosine 19324972.36 19040262.33 28288811.62 25479456.07 20837217.58 21987110.93 13784346.46 13898378.75 12143692.07 36027297.46 14582480.3 14376817.33 N-acetylneuraminic acid 1549950.006 1503732.138 1503808.467 1750882.599 1516918.905 1466566.194 1241990.703 1471450.656 1388762.055 1466043.858 1392044.139 989981.529 NeuNGc 435244.587 523554.975 517447.842 417882.834 374230.485 671473.32 393444.255 304016.832 313860.399 336051.522 377921.133 208363.185 thiamine 0 0 0 0 0 0 0 0 0 0 0 0 S-(2-Methylpropanoyl)-dihydrolipoamide 1000 21224.619 36283.149 23752.128 1000 21680.178 1000 12766.689 17121.312 1000 16802.916 1000 12S-HHT 644018.565 421514.97 566804.07 405345.81 384274.191 477964.623 723186.597 453076.326 970630.566 540246.012 469618.653 463448.85 CDP-ethanolamine 1445352.396 1519455.945 1698013.527 1843026.672 1704410.664 1737332.097 1931094.768 2223788.817 1950536.547 2094353.91 2059163.127 1980774.522 Acetyl adenylate 1000 1000 17328.87 1000 1000 1000 1000 1000 1000 1000 1000 1000 (S)-2-[5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate 0 0 0 0 0 0 0 0 0 0 0 0 beta-1-4-mannose-N-acetylglucosamine 63914.01 41233.998 66260.142 106566.993 49767.471 85137.288 42251.451 1000 34997.664 30257.22 25860.6 28148.124 CMP-N-trimethyl-2-aminoethylphosphonate 400801.107 153154.248 47782.416 184282.725 206066.586 239755.863 153679.572 180972.207 210814.215 273812.4 162760.272 192225.588 CDPcholine 2914446.894 1411656.423 1274916.429 2955569.808 2123051.838 2813899.815 1775318.757 2321806.344 1917209.262 4306522.221 2739816.381 2542845.162 gama-glutamylglutathione 0 0 0 0 0 0 0 0 0 0 0 0 5-S-glutathionyl-dopamine 0 0 0 0 0 0 0 0 0 0 0 0 GSSG 25946406.33 30573366.98 31058910.55 35693241.11 35572222.81 31944666.41 36673255.81 39327356.77 31936062.41 22637106.43 34623149.11 33545254.88 CMP-N-acetyl-beta-neuraminate 3154557.978 3961327.437 4039725.282 4954573.137 4291839.486 4271132.178 4537282.578 4861521.315 4052594.082 3273701.859 3911791.779 4517803.629 Flavin adenine dinucleotide oxidized 270874.2 168665.091 230199.03 231759.051 240175.086 221250.576 276037.962 296529.882 268993.947 204988.032 269236.098 244349.583 13-carboxy-gama-tocopherol 6048265.983 5125240.221 5730094.728 5233214.379 5698623.102 5634551.301 5388380.976 5045442.546 5478018.618 4697255.622 4721074.203 4912644.462 13'-Hydroxy-alpha-tocotrienol 0 0 0 0 0 0 0 0 0 0 0 0 bilirubin 115961.079 90432.156 161738.046 64229.535 130217.208 103805.43 153297.243 148406.166 188409.771 143231.463 103295.625 90658.401 C4H9NO2(4) 42063811.06 41674346.22 45482797.07 40168855.47 45247488.32 40023045.26 58066475.44 55670338.52 56659115.62 42902885.74 50691238.74 55589522.09 Ureidopropionic acid/Glycyl-glycine 75783377.05 86147502.71 77820411.55 84195576.58 83227967.88 78466277.92 62465432.97 56931103.5 49726032.07 24597145.79 52965871.05 46833747.02 histamine 1403718.24 1132522.227 1064103.066 1434636.075 1432433.211 1329203.301 809050.449 1175935.236 1012252.773 2198754.333 1154404.884 941120.694 acetamidopropanal 629942183.9 588198774.6 536732420.2 643081481.3 766401020 635154585.7 293767635.1 277679005.3 243912958.4 182010953.5 277053904.2 248735633 Ornithine 8740620.999 19488096.09 19603349.06 13446667.95 11049814.25 10459948.25 19132837.09 15428671.78 18864690.42 11131320.94 13252615.14 13479657.12 3-Ureidoisobutyrate/Glycylsarcosine 1005741019 982307809.5 920840141.2 1073259302 984409019.6 811393651.3 649853856.4 728760929.4 554407991.2 296994380.1 590867465.3 512386568.7 C6H11NO3(4) 7551461.856 7668152.67 7204646.733 6808413.099 6502986.54 6234742.239 7676792.247 7840801.116 6471459.549 6058037.565 6204445.011 5395895.796 (R)-mevalonate 5969010.534 5897276.685 5295537.093 6148819.452 5353252.128 4348087.995 3505612.584 3927771.171 2989300.89 1595982.327 3287399.019 2971955.943 spermidine dialdehyde-2 16845618.45 16912139.85 15832739.67 16669965.92 16907694.59 16711882.77 16407228.72 14069705.76 14476969.43 12061847.93 14040344.59 13655687.55 acetylcholine/4-(trimethylammonio)butanoate 154641702.3 138489431.3 122082971.4 148761937.8 157121044.8 141812840.9 123465441.9 132891508.9 129316587 109266395 128365527.4 105166598.7 isoputreanine/putreanine 12060938.75 15132033.59 15502875.84 11637501.81 12025623.62 11644812.21 19166021.18 16080226.23 14237999.44 14673737.54 13331994.94 13130797.94 Glycylproline/L-Prolinylglycine 786899.853 1431070.935 1640336.451 1124601.174 960690.75 956879.892 1404358.017 1371284.946 1445569.932 1550131.002 1075771.413 1136177.277 N-Acetylmethionine 0 0 0 0 0 0 0 0 0 0 0 0 Glycylleucine 3792146.349 4278987.732 4544128.056 3636969.393 3403113.678 2849748.045 4731635.046 4464530.364 5537409.084 8589077.13 3163201.839 3152492.874 gama-L-glutamyl-L-alanine/5-L-Glutamyl-L-alanine-1 91705.11 119879.595 103486.284 84461.373 155420.538 97527.612 20033.76 12497.88 19297.32 1000 29805.54 18556.92 C9H8O3(3) 57533792.72 87145452.8 92951325.55 60959120.05 78733863.98 60605305.97 134449917.4 119005823.2 123332618.9 87813305.47 101520001.9 105847025.6 pseudoecgonine/ecgonine 520215.693 439328.616 545984.454 398936.328 366717.663 385510.887 1196387.286 885667.137 788714.97 1764879.03 582283.209 557094.096 limonene/(+)-alpha-pinene 1278300.834 1083142.911 1217184.018 1088496.141 1088458.014 1076683.179 1220785.482 1106606.898 1630122.759 1029150.9 959772.477 950253.303 (-)-Salsolinol/NN-dimethyldopaminequinone-1 790720.11 798194.925 888958.713 646368.429 700942.902 644706.381 859455.945 870637.725 1802885.007 748136.568 749584.203 699176.445 Xanthurenic acid 0 0 0 0 0 0 0 0 0 0 0 0 L-kynurenine/Formyl-5-hydroxykynurenamine 1520501.01 1104786.996 2019193.044 988350.672 521733.918 553409.436 1566132.504 2216266.557 1750136.1 3779958.525 2465392.47 2074664.691 sphingosine/(2S)-1-hydroxy-3-oxooctadecan-2-aminium 1666095.39 1208672.64 1815750.885 1295154.474 1750295.619 1443453.219 1931514.513 2966805.915 3506605.551 1702049.412 2534281.908 1878486.72 3-oxo-10(R)-hydroxy-octadeca-6E8E12Z-trienoate/3-oxo-10(S)-hydroxy-octadeca-6E8E12Z-trienoate 1934208.582 1659478.683 1817879.448 1648175.745 1514664.111 1606453.245 1531214.028 1552898.316 2321781.051 1288835.331 1485250.068 1431230.838 C18H32O4(3) 3124306.935 2057219.829 2314483.635 2109040.626 2580341.454 2391386.817 2861214.993 1930302.246 2918483.265 2337166.014 1761882.708 2147038.914 C20H28O(5) 6280531.134 4888686.945 6889560.948 5847480.285 5843389.068 6411107.688 6521299.371 6281100.942 5812398.246 5643959.502 5534144.637 6029516.238 C20H28O2(7) 1433033.475 1290377.847 1283731.008 1141139.172 1143498.273 1150592.502 1408188.765 1254345.522 1296439.593 1228414.728 1196136.603 1268841.516 C20H32O6(8) 0 0 0 0 0 0 0 0 0 0 0 0 4-(2-amino-3-hydroxyphenyl)-4-oxobutanoic acid O-glucoside 0 0 0 0 0 0 0 0 0 0 0 0 C27H44O2(5) 813247.287 560779.629 478759.518 673781.442 657173.733 657450.234 354153.669 407020.545 357234.888 330974.292 417737.916 345803.226 C27H46O2(5) 0 0 0 0 0 0 0 0 0 0 0 0 C27H44O3(5) 71147790.26 48861764.31 46589759.88 67406392.91 59567662.57 60251867.51 18196169.89 23793255.46 19857748.55 12641430.27 25096290.1 20188023.74 5-guanidino-2-oxopentanoic acid 2556466.323 3428412.798 3889673.595 3084740.91 2854016.862 2537950.278 2393595.996 1944605.919 2767366.497 12730741.55 2426312.457 2621745.069 phenylacetaldehyde 1060433.502 1811523.306 1928380.791 1274291.481 1728368.022 1131025.776 2711061.081 2466539.79 2720042.139 1665927.408 2282398.725 1969835.562 L-serine 67563112.5 77501519.79 80782604.61 75940035.27 78574058 76668155.3 133309550.4 119688292.6 128551803.6 109319959.6 135346393.5 131678470.7 L-cysteine 0 0 0 0 0 0 0 0 0 0 0 0 NN-dimethylglycine 31909978.5 32558619.61 36994251.22 31661572.87 35009277.34 31271093.25 45274305.39 43161210.5 46561345.96 24379955.49 40192161.82 44490144.76 L-asparagine 75720809.82 86030611.36 77804496.19 84100055.19 83159921.28 78374500.46 62458947.27 56905020.69 49726032.07 24586815.23 52965871.05 46826067.32 L-homocysteine 22538.37 29362.98 1000 17802.369 1000 49873.227 36253.854 22449.45 1000 82488.723 19012.578 17838.756 choline 2440592059 2877756772 3515298425 2456504766 2670545776 2446197662 2351900090 2303661566 2518620761 1397339615 2220768409 2042111022 L-methionine 202224195 277899121.4 365462474.2 228035276.5 239650569 198706859.4 248720628 245436878.9 203802163.6 179711559.7 221709582.6 200184177.6 L-histidine 946565070 1276794492 1243663482 1318892339 1322616448 1283023494 1250607050 1428868637 941389154.4 620790840.5 1087336194 1117219211 L-phenylalanine 1802068146 2077410706 2348749964 1820986441 1935055049 1824278867 4866771285 4205725280 4430178800 5334646200 3507340528 3504503673 Biotin 2172275.988 2177508.54 2354928.78 2417194.287 2309736.312 2349619.485 4735681.212 4182295.812 3086959.617 7632561.648 4058191.206 4393597.776 S-Adenosyl-L-homocysteine 1515709.428 2490161.496 2762247.561 1956865.383 2171866.587 2286603.717 2663071.767 1940549.907 1946521.929 1797397.323 2807471.067 2586027.24 S-adenosyl-L-methionine 1789032.522 3105885.375 3781728.948 2020858.14 2250117.471 2130266.37 2765695.074 2481917.778 1667938.62 7183397.187 2112056.916 2304360.642 Riboflavin 1617646.653 2232457.356 3716416.965 1735248.606 2045774.661 1640087.682 3739609.884 3260035.512 3860119.065 2674865.265 2403191.763 2933884.644 Folate 0 0 0 0 0 0 0 0 0 0 0 0 Coenzyme A 0 0 0 0 0 0 0 0 0 0 0 0 L-threonine 37735341.05 62928536.8 76097008.52 46924512.66 51315569.24 40824289.01 42716711.77 37800690.07 34052988.55 33442042.61 34462231.35 35690682.59 glycine betaine 6363964594 6487852748 7344715155 6389390150 6792797934 6289506683 7049816027 7603358592 7369726947 7269588453 6981869915 6920141872 L-glutamine 1005326731 981951693.8 920510012.3 1072723489 984027210.4 810953627.9 649506511.9 728400278.8 554199638.7 296810692.6 590527496.3 511991497.1 Glycerol 0 0 0 0 0 0 0 0 0 0 0 0 L-tyrosine 406244272.9 621104764.6 644897302.9 441024547.4 559652571.3 423386462.2 929084064.1 822520558.3 860207657.3 614116242.4 709018308.4 723292888.4 L-alanine 110599863 123206729.1 114732670.2 120251290 123952742.9 123247130.1 139102152.8 136170989.2 130667398.4 139599687.6 135409689.2 142944912.1 L-proline 629942183.9 588198774.6 536732420.2 643081481.3 766401020 635154585.7 293767635.1 277679005.3 243912958.4 182010953.5 277053904.2 248735633 adenosine 43672183.08 44634079.14 38479764.99 50870032.1 67696002.01 80410991.33 38380195.59 37726413 55301546.48 35867366.59 81978264.65 60498104.62 2-deoxycytidine 2454993.303 2543123.001 3137379.729 2809866.297 2922629.073 2441535.501 6635194.74 4980825.39 7461373.902 16275888.47 4422630.639 4397556.27 adenine 27221514.95 26068013.85 26500712.35 29396953.35 26110032.53 31987343.73 29977695.89 25173741.11 33554887.77 31225510.25 30341959.86 29662857.06 Guanine 1526238315 1688459746 1641950311 1681089903 1644217132 1519324371 1628314927 1765388917 1721126834 1688876604 1762844912 1532372273 cytosine 14172716.68 14413589.71 18313887.74 16689869.21 16062149.66 15427991.52 37549282.37 28658858.44 39335771.17 82295292.72 24725486.54 23939842.96 thymine/imidazol-4-ylacetate 1520322.771 935111.049 1562836.515 1871414.682 1519197.99 1555509.564 7208157.492 4690842.786 11035781.08 31938213.79 4205379.786 5152766.664 (R)-carnitine 1195946951 1029915748 1125279464 1220965286 1192804102 1173246502 966324886.9 1095298411 989754090.9 465126887.1 1032862305 954964869.1 O-acetylcarnitine 381674264.1 390351561.9 465450246.1 369833969.8 487404582.9 452294457.3 593300077.7 570387858 604105390.9 503853439.2 617438123.3 552243519 propionyl-carnitine 39868783.23 44731047.78 59232287.51 41002195.16 47513079.38 45190440.16 97900491.41 79494719.24 128069941.2 443040966.9 98984759.06 102545820.4 butyryl carnitine 26771824.36 39775125.6 44680704.84 30391732.54 31177079.73 28154016.65 47385939.49 46162034.96 51953737.1 51757289.3 41200734.23 41750941.68 3-Hydroxybutyrylcarnitine 6842089.617 4989999.483 5555330.055 6566290.959 5795235.999 5638006.119 7189565.139 9102135.204 6967518.033 6778163.07 8425593.867 7058351.265 succinyl carnitine 1289574.219 654507.822 1010090.526 1148936.232 1036050.453 1022500.734 1678162.251 1981467.852 1550328.939 2249617.776 1764963.138 1532584.206 tiglyl carnitine 4722270.81 4703664.243 5342905.758 4494213.777 4863767.595 4518549.594 5361735.453 5069746.761 5005856.04 4923689.946 5344743.162 4361581.314 3-hydroxy-isovaleryl carnitine 11604972.47 9595383.627 11159413.18 11370922.33 12220681.61 11439933.93 13482174.38 15412618.83 13623617.53 11963341.7 17006503.32 14604625.57 glutaryl carnitine 2276007.615 1540878.189 1422705.39 3100307.547 2415037.263 2399832.342 981165.504 1296158.667 814368.939 1018310.904 794631.963 795836.748 octenoyl carnitine 3530669.847 2974750.896 3463927.755 3758699.829 3845487.906 3248602.692 2596267.326 2304363.684 2580162.813 2180342.43 2315465.661 2244436.752 octanoyl carnitine/L-Octanoylcarnitine 2075981.874 1653367.968 2281164.861 2194460.256 2349409.482 2163901.377 1398189.735 1455068.07 1429670.958 833689.173 1217480.826 1207497.402 decenoyl carnitine 531121.71 399451.506 552311.841 630257.514 575596.446 568742.907 358842.756 337342.515 315466.203 208240.812 336513.876 277243.731 decanoyl carnitine 1117030.911 793890.216 1188876.222 984356.661 1153730.175 1023551.565 829154.262 717825.264 710923.062 428936.619 700244.1 597596.442 tetradecenoyl carnitine 3077191.077 1821342.228 3241297.656 2787546.615 2888923.092 2675343.642 3491299.902 2967707.292 3195347.604 3198643.842 3182952.648 2715921.231 pendtadenoyl carnitine 1426844.706 753328.611 1348605.372 1309324.32 1276700.301 1449996.489 1397972.001 1616014.614 1457113.458 1470444.141 1533950.604 1486566.543 L-palmitoylcarnitine 32621920.32 24956865.69 36896473.34 35980110 37866989.76 39060597.11 38001729.92 42258408.39 40300445.39 40251647.88 43223567.4 39748566.01 3-hydroxyhexadecenoylcarnitine 1591948.26 505754.718 1549805.208 1430908.509 873981.222 1393002.141 1748558.391 1511839.902 1947809.316 1657682.508 1641295.23 1498451.946 3-hydroxyhexadecanoylcarnitine 364940.841 479311.875 703209.69 356471.874 416233.326 503914.92 873942.6 705791.151 761868.903 433581.645 656655.822 567583.302 heptadecanoyl carnitine 2405701.275 1760696.781 2712386.913 2503392.234 2438481.879 2596267.059 3097531.269 3048223.17 3084226.344 3256620.657 3422636.088 3062602.722 stearoylcarnitine 7461688.605 5601552.039 9026453.199 7977073.794 8705981.229 8807800.986 10107724.16 11220556.28 11055033.85 10629482.05 11658490.06 10191095.52 Tetracosatetraenoyl carnitine 0 0 0 0 0 0 0 0 0 0 0 0 tetradecanoyl carnitine(myristoyl carnitine) 3179101.227 2523952.383 3489275.664 3303317.658 3193516.584 3356148.15 3448360.113 3555607.959 3624186.708 3330892.911 3411801.981 3407633.346 trans-Hexadec-2-enoyl carnitine 5099888.856 3867019.881 5628604.071 4847196.558 4618433.274 5288525.4 5141926.572 5274739.719 5551487.487 4316905.038 5134721.691 5143385.361 alpha-linolenyl carnitine/gamma-linolenyl carnitine 2083747.938 1421616.615 2165889.372 2027178.057 1251352.596 1790602.491 2218959.267 1693040.151 1847975.91 1805595.792 1767532.482 1901386.818 Linoleyl carnitine/Linoelaidyl carnitine 6128854.242 4609110.402 7013657.16 6325982.568 5383263.282 5780483.637 6877997.493 6098143.002 6740098.545 5487567.144 6043232.88 6636298.125 Elaidic carnitine/Vaccenyl carnitine 25925814.82 19699743.18 30348827.79 27139009.06 25280513.85 26600286.1 29694184.92 30154690.41 31480913.3 26790679.1 31246470.52 31568806.36 lauroyl carnitine 1285125.657 1085562.186 1697466.639 1420323.273 1361751.294 1382661.951 1340256.12 1167171.933 1296248.58 993661.794 1151527.875 1135780.884 1-methylpyrrolinium 4991509.095 6977995.713 7569219.24 5600586.681 5502519.84 5053734.147 6526446.573 5364612.192 5400326.118 12098516.36 4622980.17 4483508.526 glycine 37328436.29 41394216.53 49111618.65 38296474.18 45232758.19 41662434.11 39135950.94 41213768.49 48925327.09 31837516.2 37135032.3 43234886 sarcosine 8085268.194 10116973.08 10357815.49 9965699.358 10033048.71 9141050.691 10459118.79 11127995.03 8490090.666 11980114.88 9617825.781 10353013.99 nicotinamide nucleotide 165690.45 155784.105 153291.453 145834.611 165105.366 147835.986 125092.038 135869.904 143847.303 206014.419 146187.702 118275.72 Nicotinamide 36944944.33 31766466.77 40595734.49 37163748.2 34944179.75 42420545.24 44563750.62 43453141.89 47794137.19 45280659.24 57454315.6 61602539.99 NAD+ 15963478.34 15036791.71 17471677.94 16208926.33 17151041.9 16039932.2 16783264.2 18168677.36 16975839.51 14541075.62 17973536.68 16924959.39 NADP+ 1419909.726 1337626.293 1545001.608 1664079.564 1602385.302 1637446.674 1234157.097 1382550.246 1290322.401 1445487.099 1567010.463 1354829.532 1-methylnicotinamide 24674.082 21414.036 17630.682 12008.355 8894.868 3520.32 8923.572 1000 8174.142 35017.086 4307.436 9640.863 MS_METABOLITE_DATA_END #METABOLITES METABOLITES_START metabolite_name Chemical formula 2-aminoacrylic acid C3H5NO2 N-Methylethanolamine phosphate C3H10NO4P creatinine C4H7N3O creatine C4H9N3O2 Phosphodimethylethanolamine C4H12NO4P 5,6-dihydrothymine C5H8N2O2 2-deoxy-D-ribose C5H10O4 2-keto-4-methylthiobutyrate C5H8O3S L-cysteinylglycine C5H10N2O3S choline phosphate C5H14NO4P Urocanate C6H6N2O2 Methylimidazoleacetic acid C6H8N2O2 4-Imidazolone-5-propanoate C6H8N2O3 D-Alanyl-D-alanine C6H12N2O3 citr_L[e] C6H13N3O3 D-Glucosamine C6H13NO5 benzoate C7H6O2 4-trimethylammoniobutanal C7H15NO anthranilate C7H7NO2 N(2)-acetyl-L-ornithine C7H14N2O3 2-phenylethanamine C8H11N dopaminochrome C8H7NO2 Pyridoxal C8H9NO3 sn-Glycero-3-phosphocholine C8H20NO6P 5-amino-1-(5-phospho-D-ribosyl)imidazole C8H14N3O7P coumarin C9H6O2 N6N6N6-Trimethyl-L-lysine C9H20N2O2 L-Alanyl-L-leucine C9H18N2O3 3-Hydroxy-N6N6N6-trimethyl-L-lysine C9H20N2O3 C9H13N5O3(4) C9H13N5O3 N-methyl-467-trihydroxy-1234-tetrahydroisoquinoline C10H13NO3 xanthosine C10H12N4O6 glutathione C10H17N3O6S beta-carboline C11H8N2 N1,N12-diacetylspermidine C11H23N3O2 lysyl-proline C11H21N3O3 N-Ribosylnicotinamide C11H14N2O5 3,5-dihydroxy-3,4-dihydro-1,4-benzothiazine C11H14N2O4S 5-Methylthioadenosine C11H15N5O3S N-acetylneuraminic acid C11H19NO9 NeuNGc C11H19NO10 thiamine C12H16N4OS S-(2-Methylpropanoyl)-dihydrolipoamide C12H23NO2S2 12S-HHT C17H28O3 CDP-ethanolamine C11H20N4O11P2 Acetyl adenylate C12H16N5O8P (S)-2-[5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate C13H19N4O12P beta-1-4-mannose-N-acetylglucosamine C14H25NO11 CMP-N-trimethyl-2-aminoethylphosphonate C14H26N4O10P2 CDPcholine C14H26N4O11P2 gama-glutamylglutathione C15H24N4O9S 5-S-glutathionyl-dopamine C18H26N4O8S GSSG C20H32N6O12S2 CMP-N-acetyl-beta-neuraminate C20H31N4O16P Flavin adenine dinucleotide oxidized C27H33N9O15P2 13-carboxy-gama-tocopherol C28H46O4 13'-Hydroxy-alpha-tocotrienol C29H44O3 bilirubin C33H36N4O6 C4H9NO2(4) C4H9NO2 Ureidopropionic acid/Glycyl-glycine C4H8N2O3 histamine C5H9N3 acetamidopropanal C5H9NO2 Ornithine C5H12N2O2 3-Ureidoisobutyrate/Glycylsarcosine C5H10N2O3 C6H11NO3(4) C6H11NO3 (R)-mevalonate C6H12O4 spermidine dialdehyde-2 C7H13NO2 acetylcholine/4-(trimethylammonio)butanoate C7H15NO2 isoputreanine/putreanine C7H16N2O2 Glycylproline/L-Prolinylglycine C7H12N2O3 N-Acetylmethionine C7H13NO3S Glycylleucine C8H16N2O3 gama-L-glutamyl-L-alanine/5-L-Glutamyl-L-alanine-1 C8H14N2O5 C9H8O3(3) C9H8O3 pseudoecgonine/ecgonine C9H15NO3 limonene/(+)-alpha-pinene C10H16 (-)-Salsolinol/NN-dimethyldopaminequinone-1 C10H13NO2 Xanthurenic acid C10H7NO4 L-kynurenine/Formyl-5-hydroxykynurenamine C10H12N2O3 sphingosine/(2S)-1-hydroxy-3-oxooctadecan-2-aminium C18H37NO2 3-oxo-10(R)-hydroxy-octadeca-6E8E12Z-trienoate/3-oxo-10(S)-hydroxy-octadeca-6E8E12Z-trienoate C18H28O4 C18H32O4(3) C18H32O4 C20H28O(5) C20H28O C20H28O2(7) C20H28O2 C20H32O6(8) C20H32O6 4-(2-amino-3-hydroxyphenyl)-4-oxobutanoic acid O-glucoside C16H21NO9 C27H44O2(5) C27H44O2 C27H46O2(5) C27H46O2 C27H44O3(5) C27H44O3 5-guanidino-2-oxopentanoic acid C6H11N3O3 phenylacetaldehyde C8H8O L-serine C3H7NO3 L-cysteine C3H7NO2S NN-dimethylglycine C4H9NO2 L-asparagine C4H8N2O3 L-homocysteine C4H9NO2S choline C5H13NO L-methionine C5H11NO2S L-histidine C6H9N3O2 L-phenylalanine C9H11NO2 Biotin C10H16N2O3S S-Adenosyl-L-homocysteine C14H20N6O5S S-adenosyl-L-methionine C15H22N6O5S Riboflavin C17H20N4O6 Folate C19H19N7O6 Coenzyme A C21H36N7O16P3S L-threonine C4H9NO3 glycine betaine C5H11NO2 L-glutamine C5H10N2O3 Glycerol C3H8O3 L-tyrosine C9H11NO3 L-alanine C3H7NO2 L-proline C5H9NO2 adenosine C10H13N5O4 2-deoxycytidine C9H13N3O4 adenine C5H5N5 Guanine C5H5N5O cytosine C4H5N3O thymine/imidazol-4-ylacetate C5H6N2O2 (R)-carnitine C7H15NO3 O-acetylcarnitine C9H17NO4 propionyl-carnitine C10H19NO4 butyryl carnitine C11H21NO4 3-Hydroxybutyrylcarnitine C11H21NO5 succinyl carnitine C11H19NO6 tiglyl carnitine C12H21NO4 3-hydroxy-isovaleryl carnitine C12H23NO5 glutaryl carnitine C12H21NO6 octenoyl carnitine C15H27NO4 octanoyl carnitine/L-Octanoylcarnitine C15H29NO4 decenoyl carnitine C17H31NO4 decanoyl carnitine C17H33NO4 tetradecenoyl carnitine C21H39NO4 pendtadenoyl carnitine C22H43NO4 L-palmitoylcarnitine C23H45NO4 3-hydroxyhexadecenoylcarnitine C23H43NO5 3-hydroxyhexadecanoylcarnitine C23H45NO5 heptadecanoyl carnitine C24H47NO4 stearoylcarnitine C25H49NO4 Tetracosatetraenoyl carnitine C31H53NO4 tetradecanoyl carnitine(myristoyl carnitine) C21H41NO4 trans-Hexadec-2-enoyl carnitine C23H43NO4 alpha-linolenyl carnitine/gamma-linolenyl carnitine C25H43NO4 Linoleyl carnitine/Linoelaidyl carnitine C25H45NO4 Elaidic carnitine/Vaccenyl carnitine C25H47NO4 lauroyl carnitine C19H37NO4 1-methylpyrrolinium C5H9N glycine C2H5NO2 sarcosine C3H7NO2 nicotinamide nucleotide C11H15N2O8P Nicotinamide C6H6N2O NAD+ C21H27N7O14P2 NADP+ C21H28N7O17P3 1-methylnicotinamide C7H8N2O METABOLITES_END #END