#METABOLOMICS WORKBENCH ryant_20220217_081124 DATATRACK_ID:3094 STUDY_ID:ST002189 ANALYSIS_ID:AN003583 PROJECT_ID:PR001395 VERSION 1 CREATED_ON June 6, 2022, 9:19 pm #PROJECT PR:PROJECT_TITLE Metabolomic profiling reveals muscle metabolic changes following iliac PR:PROJECT_TITLE arteriovenous fistula creation in mice PR:PROJECT_TYPE Study of the skeletal muscle metabolome in mice with iliac arteriovenous fistula PR:PROJECT_TYPE via 1H NMR PR:PROJECT_SUMMARY In the present study, we hypothesize that the creation of an iliac AVF would PR:PROJECT_SUMMARY result in significant alterations to the limb muscle metabolome. Recently, our PR:PROJECT_SUMMARY group developed a new murine model to address the pathophysiology of PR:PROJECT_SUMMARY access-related hand dysfunction (ARHD) in mice, where AVF creation is performed PR:PROJECT_SUMMARY in the iliac artery/vein. Because of the anatomical location of the AVF PR:PROJECT_SUMMARY creation, this model produces clinically relevant changes in the mouse hindlimb PR:PROJECT_SUMMARY including hemodynamic alterations, muscle weakness, and mitochondrial function PR:PROJECT_SUMMARY impairment. PR:INSTITUTE University of Florida PR:DEPARTMENT Applied Physiology and Kinesiology PR:LABORATORY Rm 42 and Rm 43 PR:LAST_NAME Ryan PR:FIRST_NAME Terence PR:ADDRESS 1864 Stadium Rd, FLG 114, Gainesville, FL, 32611, USA PR:EMAIL ryant@ufl.edu PR:PHONE 352-294-1700 PR:FUNDING_SOURCE National Institutes of Health (NIH) grant R01HL148597 (STS). Additional salary PR:FUNDING_SOURCE support was provided by NIH grants R01DK119274 (SAB) and R01HL149704 (TER), and PR:FUNDING_SOURCE a postdoctoral fellowship (POST903198) from the American Heart Association (KK). PR:PROJECT_COMMENTS Metabolomic study via NMR PR:PUBLICATIONS Frontiers PR:CONTRIBUTORS Ram B. Khattri, Kyoungrae Kim, Erik M. Anderson, Brian Fazzone, Kenneth C PR:CONTRIBUTORS Harland, Qiongyao Hu, Victoria R. Palzkill, Tomas A. Cort, Kerri A. O’Malle, PR:CONTRIBUTORS Scott A. Berceli, Terence E. Ryan, Salvatore T. Scali #STUDY ST:STUDY_TITLE Metabolomic profiling reveals muscle metabolic changes following iliac ST:STUDY_TITLE arteriovenous fistula creation in mice (Aqueous) ST:STUDY_SUMMARY In the present study, we hypothesize that the creation of an iliac AVF would ST:STUDY_SUMMARY result in significant alterations to the limb muscle metabolome. Recently, our ST:STUDY_SUMMARY group developed a new murine model to address the pathophysiology of ST:STUDY_SUMMARY access-related hand dysfunction (ARHD) in mice, where AVF creation is performed ST:STUDY_SUMMARY in the iliac artery/vein. Because of the anatomical location of the AVF ST:STUDY_SUMMARY creation, this model produces clinically relevant changes in the mouse hindlimb ST:STUDY_SUMMARY including hemodynamic alterations, muscle weakness, and mitochondrial function ST:STUDY_SUMMARY impairment. ST:INSTITUTE University of Florida ST:DEPARTMENT Applied Physiology and Kinesiology ST:LABORATORY Rm 42 and Rm 43 ST:LAST_NAME Ryan ST:FIRST_NAME Terence ST:ADDRESS 1864 Stadium Rd, FLG 114, Gainesville, FL, 32611, USA ST:EMAIL ryant@ufl.edu ST:NUM_GROUPS 4 ST:TOTAL_SUBJECTS 34 ST:NUM_MALES All ST:STUDY_COMMENTS Metabolomic study via NMR ST:PUBLICATIONS Frontiers ST:STUDY_TYPE Study of the skeletal muscle metabolome in mice with iliac arteriovenous fistula ST:STUDY_TYPE via 1H NMR ST:PHONE 352-294-1700 #SUBJECT SU:SUBJECT_TYPE Mammal SU:SUBJECT_SPECIES Mus musculus SU:GENOTYPE_STRAIN C57BL/6J SU:AGE_OR_AGE_RANGE 13 weeks SU:WEIGHT_OR_WEIGHT_RANGE (28.4±1.1 g (control SHAM mice) vs 26.4±2.1 g (control AVF mice) vs 23.6±2.1 SU:WEIGHT_OR_WEIGHT_RANGE (CKD SHAM mice) vs 24.7±1.3 (CKD AVF mice), N=8-10/group). SU:GENDER Male SU:ANIMAL_ANIMAL_SUPPLIER Jackson Labs (Stock # 000664) SU:ANIMAL_HOUSING Housed in a temperature of 22 oC SU:ANIMAL_LIGHT_CYCLE 12-hour light/12-hour dark SU:ANIMAL_FEED Ad libitum (Casein control diet vs. adenine-supplemented diet to induce CKD) SU:ANIMAL_WATER free access to food and water (3-5 animals per cage). SU:ANIMAL_INCLUSION_CRITERIA (3-5 animals per cage). #SUBJECT_SAMPLE_FACTORS: SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Raw file names and additional sample data SUBJECT_SAMPLE_FACTORS - Sample name Factor1***:Group RAW_FILE_NAME=raw data file names SUBJECT_SAMPLE_FACTORS - Terence_MS18_Quad_Aq Factor1***:CKD_AVF RAW_FILE_NAME=Terence_MS18_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS26_Quad_Aq Factor1***:CKD_AVF RAW_FILE_NAME=Terence_MS26_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS27_Quad_Aq Factor1***:CKD_AVF RAW_FILE_NAME=Terence_MS27_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS28_Quad_Aq Factor1***:CKD_AVF RAW_FILE_NAME=Terence_MS28_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS29_Quad_Aq Factor1***:CKD_AVF RAW_FILE_NAME=Terence_MS29_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS30_Quad_Aq Factor1***:CKD_AVF RAW_FILE_NAME=Terence_MS30_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS36_Quad_Aq Factor1***:CKD_AVF RAW_FILE_NAME=Terence_MS36_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS37_Quad_Aq Factor1***:CKD_AVF RAW_FILE_NAME=Terence_MS37_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS39_Quad_Aq Factor1***:CKD_AVF RAW_FILE_NAME=Terence_MS39_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS40_Quad_Aq Factor1***:CKD_AVF RAW_FILE_NAME=Terence_MS40_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS6_Quad_Aq Factor1***:CKD_SHAM RAW_FILE_NAME=Terence_MS6_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS7_Quad_Aq Factor1***:CKD_SHAM RAW_FILE_NAME=Terence_MS7_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS8_Quad_Aq Factor1***:CKD_SHAM RAW_FILE_NAME=Terence_MS8_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS9_Quad_Aq Factor1***:CKD_SHAM RAW_FILE_NAME=Terence_MS9_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS10_Quad_Aq Factor1***:CKD_SHAM RAW_FILE_NAME=Terence_MS10_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS16_Quad_Aq Factor1***:CKD_SHAM RAW_FILE_NAME=Terence_MS16_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS17_Quad_Aq Factor1***:CKD_SHAM RAW_FILE_NAME=Terence_MS17_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS20_Quad_Aq Factor1***:CKD_SHAM RAW_FILE_NAME=Terence_MS20_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS14_Quad_Aq Factor1***:CON_AVF RAW_FILE_NAME=Terence_MS14_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS22_Quad_Aq Factor1***:CON_AVF RAW_FILE_NAME=Terence_MS22_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS23_Quad_Aq Factor1***:CON_AVF RAW_FILE_NAME=Terence_MS23_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS24_Quad_Aq Factor1***:CON_AVF RAW_FILE_NAME=Terence_MS24_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS25_Quad_Aq Factor1***:CON_AVF RAW_FILE_NAME=Terence_MS25_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS32_Quad_Aq Factor1***:CON_AVF RAW_FILE_NAME=Terence_MS32_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS33_Quad_Aq Factor1***:CON_AVF RAW_FILE_NAME=Terence_MS33_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS35_Quad_Aq Factor1***:CON_AVF RAW_FILE_NAME=Terence_MS35_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS1_Quad_Aq Factor1***:CON_SHAM RAW_FILE_NAME=Terence_MS1_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS2_Quad_Aq Factor1***:CON_SHAM RAW_FILE_NAME=Terence_MS2_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS3_Quad_Aq Factor1***:CON_SHAM RAW_FILE_NAME=Terence_MS3_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS4_Quad_Aq Factor1***:CON_SHAM RAW_FILE_NAME=Terence_MS4_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS5_Quad_Aq Factor1***:CON_SHAM RAW_FILE_NAME=Terence_MS5_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS11_Quad_Aq Factor1***:CON_SHAM RAW_FILE_NAME=Terence_MS11_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS12_Quad_Aq Factor1***:CON_SHAM RAW_FILE_NAME=Terence_MS12_Quad_Aq.raw SUBJECT_SAMPLE_FACTORS - Terence_MS15_Quad_Aq Factor1***:CON_SHAM RAW_FILE_NAME=Terence_MS15_Quad_Aq.raw #COLLECTION CO:COLLECTION_SUMMARY Two weeks after surgery, mice were anesthetized using isoflurane and the left CO:COLLECTION_SUMMARY quadriceps muscle was rapidly dissected and immediately frozen in liquid CO:COLLECTION_SUMMARY nitrogen and stored at -80oC for metabolite extraction. Euthanasia was carried CO:COLLECTION_SUMMARY out by thoracotomy followed by cervical dislocation. CO:SAMPLE_TYPE Muscle CO:COLLECTION_METHOD While under isoflurane anesthesia, tissues were rapidly dissected and snap CO:COLLECTION_METHOD frozen in liquid nitrogen and stored at -80°C until metabolite extraction CO:COLLECTION_LOCATION University of Florida, Applied Physiology and Kinesiology, 1864 stadium RD, CO:COLLECTION_LOCATION Gainesville, FL 32611 CO:STORAGE_CONDITIONS -80℃ CO:STORAGE_VIALS cryovials #TREATMENT TR:TREATMENT_SUMMARY Briefly, mice were acclimated to a standard casein-based chow (Control Diet) for TR:TREATMENT_SUMMARY 7 days. Thereafter, the animals were randomly assign to either remain on Control TR:TREATMENT_SUMMARY Diet (non-CKD groups) or receive adenine-supplemented diet to induce CKD. TR:TREATMENT_SUMMARY Following three weeks of the casein/adenine diet, animals were randomly assigned TR:TREATMENT_SUMMARY to receive either an arteriovenous fistula surgery (AVF) or sham surgery (SHAM) TR:ANIMAL_VET_TREATMENTS none TR:ANIMAL_ANESTHESIA isoflurane TR:ANIMAL_FASTING non-fasted TR:ANIMAL_ENDP_EUTHANASIA Euthanasia was carried out by thoracotomy followed by cervical dislocation. TR:ANIMAL_ENDP_TISSUE_COLL_LIST Skeletal muscle (quadriceps) TR:ANIMAL_ENDP_TISSUE_PROC_METHOD Two weeks after surgery, mice were anesthetized using isoflurane and the left TR:ANIMAL_ENDP_TISSUE_PROC_METHOD quadriceps muscle was rapidly dissected and immediately frozen in liquid TR:ANIMAL_ENDP_TISSUE_PROC_METHOD nitrogen and stored at -80oC for metabolite extraction. #SAMPLEPREP SP:SAMPLEPREP_SUMMARY Weights of frozen quadriceps specimens were weighed using a microbalance SP:SAMPLEPREP_SUMMARY (Mettler-Toledo, Columbus, OH, USA). Next, a slightly modified FOLCH extraction SP:SAMPLEPREP_SUMMARY was performed to extract aqueous and lipid phase metabolites. The aqueous phase SP:SAMPLEPREP_SUMMARY was lyophilized overnight (Labconco Corporation, Kansas, MO, USA) and the lipid SP:SAMPLEPREP_SUMMARY phase was dried by passing inert nitrogen gas. The resulting aqueous and lipid SP:SAMPLEPREP_SUMMARY phase dry powders were stored at -80oC until analysis using nuclear magnetic SP:SAMPLEPREP_SUMMARY resonance (NMR). The dry powder of aqueous phase samples was dissolved in 50 µL SP:SAMPLEPREP_SUMMARY of phosphate buffer system (50 mM, pH 7.2) consisting of 0.5 mM D6-DSS, 2 mM SP:SAMPLEPREP_SUMMARY EDTA and 0.2% NaN2. Lipid phase dry powders were dissolved in 70 µL of CDCl3 SP:SAMPLEPREP_SUMMARY supplemented with 10 mM of pyrazine (as internal NMR standard). All samples were SP:SAMPLEPREP_SUMMARY loaded into 1.5 mm optical density (O.D.) NMR tubes. SP:SAMPLEPREP_PROTOCOL_FILENAME AVF_NMR_Aqueous_Phase_Procedures.docx SP:PROCESSING_METHOD Lyophilization and Homogenization SP:PROCESSING_STORAGE_CONDITIONS -80℃ SP:EXTRACTION_METHOD Modified FOLCH extraction SP:EXTRACT_STORAGE -80℃ SP:SAMPLE_RESUSPENSION In 50 microliter of 50 mM phosphate buffer (pH 7.2) with 2 mM EDTA, 0.5 mM DSS SP:SAMPLE_RESUSPENSION and 0.2% sodium azide for aqueous phase samples. SP:SAMPLE_SPIKING 0.5 mM of DSS for aqueous phase samples #ANALYSIS AN:DATA_FORMAT fid, 1r #NMR NM:INSTRUMENT_NAME Bruker Avance III Cryo800 MHz 54 mm NM:INSTRUMENT_TYPE FT-NMR NM:NMR_EXPERIMENT_TYPE 1D-1H NM:FIELD_FREQUENCY_LOCK Deuterium NM:STANDARD_CONCENTRATION 0.5 mM DSS NM:SPECTROMETER_FREQUENCY 799.9 NM:NMR_PROBE CP TXI CryoProbe NM:NMR_SOLVENT Phosphate buffer (pH 7.2) + 2 mM EDTA + 0.5 mM DSS + 0.2% of sodium azide in NM:NMR_SOLVENT deuterated environment NM:NMR_TUBE_SIZE 1.5 mm O.D. NM:SHIMMING_METHOD Topshim NM:PULSE_SEQUENCE noesypr1d NM:WATER_SUPPRESSION presat NM:PULSE_WIDTH 90-degree NM:RECEIVER_GAIN 645 NM:OFFSET_FREQUENCY 2827.31 Hz NM:CHEMICAL_SHIFT_REF_CPD DSS (4,4-dimethyl-4-silapentane-1-sulfonic acid) NM:TEMPERATURE 25 o C NM:NUMBER_OF_SCANS 128 scans NM:DUMMY_SCANS 8 NM:ACQUISITION_TIME 4 s NM:RELAXATION_DELAY 1 s NM:SPECTRAL_WIDTH 9523.8 NM:NUM_DATA_POINTS_ACQUIRED 38094 NM:REAL_DATA_POINTS 65536 NM:LINE_BROADENING 0.22 Hz NM:ZERO_FILLING 65,536 points NM:APODIZATION Exponential NM:BASELINE_CORRECTION_METHOD Spline NM:CHEMICAL_SHIFT_REF_STD 0 ppm for DSS NM:BINNED_INCREMENT None NM:BINNED_DATA_EXCLUDED_RANGE None #NMR_METABOLITE_DATA NMR_METABOLITE_DATA:UNITS mM NMR_METABOLITE_DATA_START Samples Terence_MS18_Quad_Aq Terence_MS26_Quad_Aq Terence_MS27_Quad_Aq Terence_MS28_Quad_Aq Terence_MS29_Quad_Aq Terence_MS30_Quad_Aq Terence_MS36_Quad_Aq Terence_MS37_Quad_Aq Terence_MS39_Quad_Aq Terence_MS40_Quad_Aq Terence_MS6_Quad_Aq Terence_MS7_Quad_Aq Terence_MS8_Quad_Aq Terence_MS9_Quad_Aq Terence_MS10_Quad_Aq Terence_MS16_Quad_Aq Terence_MS17_Quad_Aq Terence_MS20_Quad_Aq Terence_MS14_Quad_Aq Terence_MS22_Quad_Aq Terence_MS23_Quad_Aq Terence_MS24_Quad_Aq Terence_MS25_Quad_Aq Terence_MS32_Quad_Aq Terence_MS33_Quad_Aq Terence_MS35_Quad_Aq Terence_MS1_Quad_Aq Terence_MS2_Quad_Aq Terence_MS3_Quad_Aq Terence_MS4_Quad_Aq Terence_MS5_Quad_Aq Terence_MS11_Quad_Aq Terence_MS12_Quad_Aq Terence_MS15_Quad_Aq Factors Factor1***:CKD_AVF Factor1***:CKD_AVF Factor1***:CKD_AVF Factor1***:CKD_AVF Factor1***:CKD_AVF Factor1***:CKD_AVF Factor1***:CKD_AVF Factor1***:CKD_AVF Factor1***:CKD_AVF Factor1***:CKD_AVF Factor1***:CKD_SHAM Factor1***:CKD_SHAM Factor1***:CKD_SHAM Factor1***:CKD_SHAM Factor1***:CKD_SHAM Factor1***:CKD_SHAM Factor1***:CKD_SHAM Factor1***:CKD_SHAM Factor1***:CON_AVF Factor1***:CON_AVF Factor1***:CON_AVF Factor1***:CON_AVF Factor1***:CON_AVF Factor1***:CON_AVF Factor1***:CON_AVF Factor1***:CON_AVF Factor1***:CON_SHAM Factor1***:CON_SHAM Factor1***:CON_SHAM Factor1***:CON_SHAM Factor1***:CON_SHAM Factor1***:CON_SHAM Factor1***:CON_SHAM Factor1***:CON_SHAM Pantothenate 0.147614587 0.062956381 0.045346893 0.15496874 0.397136628 0.05171417 0.047917031 0.132597992 0.059493037 0.144314116 0.095655435 0.089369786 0.099786651 0.07701208 0.061492029 0.085406942 0.080973615 0.103125671 0.09067473 0.080115363 0.083487008 0.145692862 0.095122264 0.060711366 0.166091917 0.166227512 0.113435281 0.067630562 0.08816326 0.069888029 0.103938504 0.072662072 0.055797286 0.090198272 2-Hydroxyvalerate 0.382704485 0.209371068 0.152141547 0.181964023 0.318473027 0.17309551 0.144459228 0.270049649 0.182835056 0.338565127 0.286216065 0.231208284 0.271939241 0.245547846 0.216529649 0.270612894 0.256796118 0.311756133 0.317490353 0.280566829 0.16326614 0.248811568 0.260610011 0.198973748 0.397808479 0.535880299 0.372297405 0.238737818 0.287999981 0.244030514 0.329219167 0.236125058 0.180165496 0.296596306 Anserine 1.717553431 3.265898535 2.177195322 2.003411471 2.153447908 4.056027367 3.03399785 1.856475159 3.85271863 1.462086778 4.905060638 3.387864429 5.042112265 4.265406033 3.879003882 3.704119045 4.301334979 5.291069827 3.990589699 2.958615799 2.216352796 2.819904636 1.220579522 3.140040611 2.649873402 5.096868734 6.589441414 4.313849888 5.135509868 4.16339161 4.374481558 3.999188123 3.862277964 4.248284812 Aspartate 0.941939008 0.254436619 0.195699454 0.581358676 0.830932022 0.22766945 0.308687182 0.957204664 0.411407532 0.97289233 0.194686943 0.30777801 0.390281261 0.44526201 0.32778315 0.293304038 0.441316555 0.488359989 0.320581537 0.405903347 0.607015134 0.68637258 0.835482739 0.340448957 1.243855552 0.971404129 0.233667304 0.308238052 0.448478105 0.268577963 0.198208309 0.336102094 0.30065713 0.350930454 Trimethylamine 0.015794153 0.051158104 0.043246779 0.039081038 0.060334218 0.069667169 0.054644299 0.019621198 0.05376153 0.025377766 0.089778565 0.060310191 0.095663236 0.070977552 0.076808999 0.073641164 0.080870068 0.090955561 0.085393957 0.059896289 0.045929815 0.05330815 0.058026143 0.068023319 0.030913007 0.021504958 0.108747873 0.070273892 0.092676379 0.073281353 0.072515235 0.073408965 0.063931742 0.064734744 Taurine 26.70876379 68.83994987 57.67712503 62.58297349 69.84852591 81.2916569 72.51894541 30.29698889 77.11913863 33.88189051 88.76211635 86.25856394 78.99865877 75.97830826 68.93809393 88.56825972 90.47890229 79.03589885 74.73993388 68.98411085 55.61418838 50.89806658 73.58152243 84.3778312 57.30865357 36.93079337 72.7900605 68.30963988 74.28961612 64.21244235 81.69614731 83.07099358 59.56309433 90.58165942 Glycerol 0.736736508 0.968425807 0.708438248 0.83165804 1.333292885 0.934588652 1.230499925 0.991283588 1.04978272 1.174978872 1.121231741 1.015817344 1.04363642 1.15087083 0.781464319 0.952502762 0.957393915 0.912300748 1.432119771 0.92899036 0.907711893 1.26829978 0.955049394 1.550687945 1.125966968 1.857950858 1.032284495 0.735168063 0.924559706 0.681552679 1.490671516 1.095799526 0.554286934 1.132051075 Glycine 3.26708137 2.830232641 1.820642739 1.426344932 5.797006754 3.788162264 3.521665766 3.582417716 3.463893233 4.362285947 5.82947976 4.927446375 4.547302426 5.294293176 3.510574724 4.114450553 3.352017717 3.993809274 1.432119771 4.016638637 3.254438383 3.92671208 4.508545384 5.594419458 5.508278611 5.144722109 4.403820105 3.758879557 4.342880182 3.898784558 4.488572195 3.726358582 3.27176728 4.765804122 Glucose 5.727810463 1.370921134 1.204142788 0.544536658 4.914056622 1.096721711 1.047388412 6.764149911 1.546245808 2.568884832 1.782567158 2.103707096 2.939170447 1.967974751 1.504649437 1.258097835 1.282738029 2.992017038 2.280649769 1.682857449 2.084663405 3.510257236 2.757920868 2.344367193 7.215829262 6.439088082 3.833245329 2.193899327 2.546448813 2.096352075 2.805131011 2.407451285 1.438845502 3.22687456 Allanttoin 0.096708816 0.132585558 0.060281032 0.06596337 0.192119087 0.110895517 0.122743135 0.107710051 0.158074948 0.172147795 0.114911561 0.087755364 0.107414969 0.084483402 0.044381853 0.096227256 0.099715589 0.1256358 0.055383713 0.05598292 0.073439861 0.054273003 0.063024357 0.054064136 0.081343123 0.146272461 0.039960156 0.036684261 0.066332357 0.041080877 0.14031698 0.046627497 0.029423854 0.047519964 ATP 0.537608682 2.091389705 2.524725196 1.980256521 2.220146496 3.352524001 2.287330117 0.459136038 1.83236261 0.695374179 4.602714441 2.32130811 2.772584468 3.1152536 2.53021395 2.509472369 2.837079372 3.318779924 2.648887059 1.94635764 1.810759038 2.368956283 1.798263745 2.713177665 1.068201562 0.982253477 3.722974049 3.159230504 4.436920992 2.720579243 3.853459594 2.46133432 2.588345853 2.322919313 Histidine 0.088204272 1.903197512 1.286980594 0.151693162 0.379655828 2.244601525 1.437983032 0.104818506 2.043740567 0.129929484 2.254842421 2.242201435 2.083974108 2.184786746 1.737542092 2.419443157 1.583645093 2.044944546 2.346466228 1.820151484 0.566946155 0.124104267 0.50435105 1.694268111 0.112518104 0.160609099 2.435577357 1.872057796 2.111929891 1.690380601 2.165788355 1.76736352 1.68872583 3.429686181 Leucine 0.615743557 0.38435936 0.278949584 0.33918787 0.571541927 0.297175425 0.266157712 0.51575385 0.33415782 0.579927695 0.477281182 0.482548226 0.445581035 0.417325163 0.346374846 0.490201831 0.440429666 0.604001901 0.492588628 0.455343401 0.344460133 0.408480578 0.430811143 0.331978656 0.587037053 0.785960053 0.584778901 0.398300013 0.447382935 0.383336453 0.547308 0.407284407 0.307363096 0.454231417 Valine 0.730873127 0.529332891 0.447010201 0.570803827 0.667383547 0.427811865 0.422439796 0.590020593 0.493432115 0.680159494 0.626844676 0.641104407 0.543481788 0.539732129 0.646440547 0.624964368 0.526626042 0.700424209 0.757904724 0.637511602 0.530401537 0.564788183 0.628246372 0.58659942 0.72519158 0.857373537 0.806457722 0.607279404 0.664193176 0.605578361 0.876208213 0.540804803 0.475462241 0.701707211 Isoleucine 0.35713809 0.216916586 0.178141506 0.227661688 0.334437835 0.179005269 0.172626417 0.313740744 0.227978078 0.345003061 0.318891721 0.325027266 0.28219183 0.262886262 0.221953949 0.299435954 0.26930675 0.380631062 0.300823964 0.301808472 0.203655238 0.268059807 0.267554575 0.213009077 0.39564635 0.485162005 0.391100329 0.265859915 0.294040277 0.259373548 0.335517214 0.246448755 0.194972501 0.297699863 Isobutyrate 0.174568244 0.138315288 0.130521098 0.217321743 0.216756299 0.104469158 0.135580123 0.205743924 0.169196238 0.195402091 0.248161334 0.274954028 0.21852815 0.187151907 0.146796126 0.196386626 0.155128875 0.284481811 0.165806745 0.16504851 0.163878739 0.144069123 0.139546042 0.114814596 0.191256034 0.212817822 0.226248028 0.131066502 0.182232346 0.127423643 0.228390774 0.140077816 0.08945009 0.18750309 Lactate 24.81114638 42.49771092 45.87582139 25.36011522 34.93934387 68.93087012 37.22635455 15.92384666 31.65026204 30.402268 84.98484958 46.94055905 49.26720844 43.76196046 46.85646364 53.28047999 42.30990509 41.82155101 68.81630634 44.193862 33.22455538 32.67654227 32.94563254 60.91258831 26.93942224 38.62718668 85.49998433 74.28200865 78.52255559 76.29381728 107.1511459 46.62266932 38.84569229 45.77832041 Alanine 3.423047047 4.862374321 3.681064147 3.505202526 5.88181424 5.421946101 4.467592208 2.926694158 4.495310251 3.448458921 3.621456099 5.627085386 4.559779737 4.31125532 5.711881907 5.230553392 4.684523398 4.256195664 7.654763857 6.465942887 5.248639708 4.850135413 5.461677254 7.450006894 5.946423766 3.997835773 6.70096407 6.431972268 6.213269206 6.46280482 6.920713355 5.19619879 4.981697683 6.537205229 Lysine 1.761504239 4.192386958 3.661956089 2.467019725 6.657493779 1.852198845 3.660452508 1.810015862 2.790016006 1.813153013 2.26482593 1.978297518 1.483428288 1.864811834 1.422197564 2.311402461 1.949292058 2.634072308 3.949294511 3.776267754 3.196857621 3.517433185 3.547159552 5.111358162 3.17512451 2.174682703 2.459458186 3.104683564 1.294972738 2.244145382 1.51577698 1.88848692 2.443940513 2.895044256 Acetate 0.438788149 0.517308582 0.347828084 0.300295416 0.589464809 0.214779828 0.380883054 0.394701205 0.578146521 0.56323321 0.414154044 0.443056811 0.443611142 0.384936337 0.299537898 0.482741274 0.374358731 0.304916586 0.589522332 0.572448498 0.467381729 0.442534483 0.382647476 0.579731313 0.55283472 0.610139659 0.373570537 0.29300489 0.228709635 0.260701975 0.372037288 0.44032552 0.33236693 0.758111551 Glutamate1 4.068435746 1.200429329 1.259824984 3.082694562 4.641831634 1.152729212 1.724613855 3.434329318 1.972080139 3.802036031 1.412393523 1.4967367 1.691514346 1.43531058 1.790106738 1.437929215 1.793032735 1.830240679 1.669868056 2.045116029 2.446530985 3.809272971 3.540290481 2.615187024 5.874935969 4.472084699 2.210829956 2.055665856 1.624443349 1.760556884 1.948956701 1.847195672 1.584538338 2.06663832 Pyruvate 0.131077689 0.130158541 0.11748328 0.1762553 0.201905647 0.081833618 0.085933955 0.145019059 0.180263027 0.155930571 0.148427542 0.165343066 0.171473187 0.185213114 0.125437403 0.169197191 0.183685161 0.134167148 0.192510771 0.194829913 0.155535183 0.153378787 0.154005702 0.163405368 0.152121123 0.218498305 0.209622786 0.104501356 0.145493489 0.084925718 0.184718565 0.174061215 0.086687204 0.232857063 Succinate 0.358049175 0.413230651 0.402034163 0.556013038 0.836612214 0.927328026 1.20153379 0.281585648 0.440046463 0.75509282 0.288900574 0.437579471 0.321151431 0.278338214 0.361420262 0.566825616 0.693174659 0.294129773 0.924321935 0.624262057 0.296167692 0.45694085 0.4667966 1.394221336 0.4374938 0.699180743 0.35607774 0.511671739 0.281334726 0.421985947 0.511170149 0.484931954 0.392523483 0.273383465 Glutamine 3.506961144 2.984339609 3.245412101 8.067905976 7.09984603 3.416594382 4.234193001 4.754779342 4.661035046 4.533393561 3.767069166 3.997642607 4.079912913 3.955942912 4.436278261 4.066446621 4.445059337 3.784378633 3.708744016 3.574699576 4.256561863 6.90302548 7.497878957 6.655947864 7.134253619 5.01374776 4.487386143 4.325510901 4.005613735 4.175749993 4.170205469 4.258751678 3.562701057 4.135598371 Creatine 8.569940529 32.57859774 28.28271685 31.78182935 32.07464693 40.11721536 33.50619954 10.80952449 36.88516742 13.52496 47.95207145 40.28532008 44.66966471 38.70894992 40.02785057 42.81705236 43.28284541 36.48009429 41.58603793 35.28906881 27.17851972 26.18286477 32.97100622 41.28462638 20.61093358 11.59120334 45.56382871 36.98380576 41.09838092 36.92424284 44.11588035 39.78130786 35.52171564 43.51705935 Creatinine+PCr 0.644738175 3.972176342 1.632809189 1.386022215 2.343640869 1.925726319 2.916761745 1.321378816 6.328012227 0.982401894 1.139347018 6.290581675 4.837584794 4.674338433 4.281895109 4.99621268 4.212704028 3.583570276 1.898947663 4.070971998 3.3225525 1.836072324 2.913086765 3.446529602 2.21038429 0.995836774 1.403952549 1.157386776 0.998572243 0.877345742 1.135965787 3.39111171 2.029244655 7.934852642 Mannose 0.016289017 0.186092134 0.34957546 0.162097464 0.216457339 0.141963322 0.203659957 0.009648545 0.301749082 0.087346865 0.081015904 0.284317802 0.354154511 0.281684415 0.275988437 0.185694563 0.133891534 0.351192987 0.334693818 0.201796961 0.25067071 0.154179569 0.159666238 0.310309002 0.00539306 0.034129536 0.164316715 0.151778535 0.175022542 0.082173463 0.238952017 0.122524358 0.116753147 0.338339028 NAD+ 0.04935557 0.26892679 0.307809493 0.32581314 0.381235759 0.463937933 0.413188014 0.126005415 0.375210865 0.096567428 0.153374415 0.334057928 0.292180103 0.396834241 0.38175945 0.387827993 0.390848648 0.367429364 0.331301036 0.364672389 0.220477703 0.241325544 0.269388 0.318278963 0.130428873 0.150432406 0.261533601 0.308159612 0.226682353 0.211849704 0.231186514 0.331301306 0.450616699 0.337362812 Fumarate 0.025367789 0.035605401 0.020438396 0.041106971 0.049443926 0.020922879 0.026237749 0.017292001 0.059846347 0.03483593 0.019529106 0.028547757 0.025965054 0.022780579 0.025185338 0.023709834 0.029884661 0.023652663 0.038949574 0.038281497 0.028142613 0.041508768 0.038958712 0.042796378 0.042357901 0.043943913 0.024670848 0.026622934 0.02199738 0.021160183 0.028358184 0.024572508 0.014282175 0.027809391 Tyrosine 0.285200664 0.156083356 0.187250835 0.433895805 0.2013195 0.236657263 0.190942017 0.187822107 0.134398307 0.260304382 0.18236258 0.179180548 0.135202963 0.156297446 0.427298571 0.198769943 0.148549342 0.218014859 0.252987544 0.181440272 0.191774228 0.166290731 0.222518145 0.266270675 0.177836268 0.253074808 0.232481207 0.168708929 0.2282479 0.220154446 0.321770139 0.192888614 0.166144218 0.2238963 Phenylalanine 0.206375356 0.152446823 0.087434042 0.162898998 0.204091639 0.168510998 0.14581718 0.171529722 0.121806636 0.205250647 0.168344082 0.145820211 0.142901523 0.129604662 0.216341364 0.163728539 0.154172914 0.123705905 0.143113605 0.161177229 0.129098234 0.146072198 0.126615523 0.143723056 0.17576472 0.243832816 0.136809677 0.126774161 0.124675271 0.09681532 0.186264409 0.141404629 0.113847681 0.106336232 Benzoate 0.038839235 0.035244199 0.009308926 0.030977155 0.0471396 0.025450354 0.03227146 0.026103935 0.066862177 0.036815162 0.06572311 0.048437935 0.044205133 0.042715762 0.035647835 0.042255778 0.049793088 0.037185549 0.038973889 0.048726271 0.057583693 0.052860765 0.030874318 0.030735179 0.042665353 0.075207147 0.059817238 0.042518279 0.041835372 0.021311505 0.071292061 0.047645822 0.028708539 0.031670149 Nicotinurate 0.145274337 0.15155747 0.107361423 0.159798389 0.199106775 0.16295244 0.135729071 0.081147624 0.155744113 0.112749134 0.378292061 0.197117447 0.207189831 0.149715059 0.187048992 0.208390243 0.217201822 0.172046347 0.195259143 0.194056381 0.212679051 0.209373886 0.237764266 0.141040329 0.14182166 0.180126592 0.39129815 0.403812415 0.407976925 0.380811578 0.363281224 0.245568246 0.184083715 0.171214448 Tryptophan 0.081210037 0.066358847 0.050788623 0.088653639 0.084202019 0.045886006 0.061431095 0.08263103 0.102330049 0.097725923 0.102827747 0.101887927 0.099051972 0.118732249 0.077959392 0.107303612 0.108077363 0.088846509 0.109030434 0.112893292 0.105518451 0.068593593 0.070094652 0.066600331 0.078704878 0.163673658 0.119332713 0.079924985 0.091579026 0.053784991 0.101585301 0.111294469 0.062224602 0.130537946 Formate 0.126225524 0.060864278 0.051595683 0.092641488 0.070066214 0.05002137 0.061177622 0.070508306 0.238691814 0.16167854 0.121035173 0.089364298 0.159109856 0.071657809 0.061208672 0.082517928 0.102420644 0.062728578 0.101688067 0.078718065 0.070995722 0.074315618 0.088071248 0.073768625 0.086495334 0.29140363 0.105613782 0.077707247 0.065685516 0.076035365 0.177055381 0.12376649 0.051927674 0.144882289 IMP 0.385823833 0.275803181 0.293022016 0.612888932 0.874317205 0.432810224 0.642435154 0.720748577 0.436935351 0.549969596 0.376584818 0.357593878 0.286799655 0.126966748 0.314666071 0.401021273 0.621069789 0.388160372 0.306202174 0.209486886 0.288378231 0.380722618 0.471481697 0.322538884 0.700414562 0.608248508 0.142970112 0.131162304 0.163579264 0.107540331 0.155442948 0.417687062 0.467867927 0.184807553 AMP 0.610896227 2.850761743 3.703272317 3.211886597 3.030535569 4.773726683 3.355642056 0.563357074 2.443719657 0.791668424 6.35360699 3.278680984 3.696303423 4.335512798 3.641642939 3.534720525 3.96849111 3.996555076 3.673923493 2.70178303 2.560301757 3.202006784 2.511192892 3.815753008 1.233956176 1.117062518 4.964147633 4.55616869 5.708526851 3.873800037 5.798464941 3.403114519 3.712784937 2.956995932 NMR_METABOLITE_DATA_END #METABOLITES METABOLITES_START metabolite_name Pantothenate 2-Hydroxyvalerate Anserine Aspartate Trimethylamine Taurine Glycerol Glycine Glucose Allanttoin ATP Histidine Leucine Valine Isoleucine Isobutyrate Lactate Alanine Lysine Acetate Glutamate1 Pyruvate Succinate Glutamine Creatine Creatinine+PCr Mannose NAD+ Fumarate Tyrosine Phenylalanine Benzoate Nicotinurate Tryptophan Formate IMP AMP METABOLITES_END #END