#METABOLOMICS WORKBENCH NOZOMU_20230315_190112 DATATRACK_ID:3790 STUDY_ID:ST002508 ANALYSIS_ID:AN004130 PROJECT_ID:PR001619 VERSION 1 CREATED_ON March 20, 2023, 7:48 am #PROJECT PR:PROJECT_TITLE Lactate-dependent Transcriptional Regulation Controls Mammalian Eye PR:PROJECT_TITLE Morphogenesis PR:PROJECT_SUMMARY Mammalian retinal metabolism favors aerobic glycolysis. However, the role of PR:PROJECT_SUMMARY glycolytic metabolism in retinal morphogenesis remains unknown. Here we report PR:PROJECT_SUMMARY that aerobic glycolysis is necessary for the early stages of retinal PR:PROJECT_SUMMARY development. Taking advantage of an unbiased approach that combines the use of PR:PROJECT_SUMMARY eye organoids and single-cell RNA sequencing we identified specific glucose PR:PROJECT_SUMMARY transporters and glycolytic genes in retinal progenitors. Next, we determined PR:PROJECT_SUMMARY that the optic vesicle territory of mouse embryos displays elevated levels of PR:PROJECT_SUMMARY glycolytic activity. At the functional level, we found that removal of Glut1 PR:PROJECT_SUMMARY (also known as Slc2a1) and Lactate dehydrogenase A (Ldha) gene activity from PR:PROJECT_SUMMARY developing retinal progenitors arrested eye morphogenesis. Surprisingly, we PR:PROJECT_SUMMARY uncovered that lactate-mediated upregulation of key eye-field transcription PR:PROJECT_SUMMARY factors was controlled by the epigenetic modification of histone H3 acetylation PR:PROJECT_SUMMARY through histone deacetylase (Hdac) activity. Our results identify a novel PR:PROJECT_SUMMARY bioenergetic independent role of lactate as a signaling molecule necessary for PR:PROJECT_SUMMARY mammalian eye morphogenesis. PR:INSTITUTE Northwestern University PR:LAST_NAME TAKATA PR:FIRST_NAME NOZOMU PR:ADDRESS 303 East Superior Street, 10-220, Chicago, Illinois, 60611, USA PR:EMAIL nozomu.takata@northwestern.edu PR:PHONE 13125036066 #STUDY ST:STUDY_TITLE 13C-isotopic labeling of mouse eye organoids under three conditions. ST:STUDY_SUMMARY To examine the potential involvement of metabolites, we performed 13C-glucose ST:STUDY_SUMMARY labeling under three conditions: 13C-glucose = control, 13C-glucose + GNE-140 = ST:STUDY_SUMMARY LHDi, 13C-lactate in glucose free media mimicking the lack of glucose. Cell Name ST:STUDY_SUMMARY AES0145 : Rx-GFP K/I EB5 (RIKEN Cell Bank): Organoid method (PMID: 21475194). ST:INSTITUTE Northwestern University ST:LAST_NAME TAKATA ST:FIRST_NAME NOZOMU ST:ADDRESS 303 East Superior Street, 10-220, Chicago, Illinois, 60611, USA ST:EMAIL nozomu.takata@northwestern.edu ST:PHONE 13125036066 #SUBJECT SU:SUBJECT_TYPE Mammal SU:SUBJECT_SPECIES Mus musculus SU:TAXONOMY_ID 10090 #SUBJECT_SAMPLE_FACTORS: SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Raw file names and additional sample data SUBJECT_SAMPLE_FACTORS - Cont1 Genotype:Wild-type | Treatment:Control RAW_FILE_NAME=Cont-biological_independent1.raw SUBJECT_SAMPLE_FACTORS - Cont2 Genotype:Wild-type | Treatment:Control RAW_FILE_NAME=Cont-biological_independent2.raw SUBJECT_SAMPLE_FACTORS - Cont3 Genotype:Wild-type | Treatment:Control RAW_FILE_NAME=Cont-biological_independent3.raw SUBJECT_SAMPLE_FACTORS - LDHi1 Genotype:Wild-type | Treatment:LDHi RAW_FILE_NAME=LDHi-biological_independent1.raw SUBJECT_SAMPLE_FACTORS - LDHi2 Genotype:Wild-type | Treatment:LDHi RAW_FILE_NAME=LDHi-biological_independent2.raw SUBJECT_SAMPLE_FACTORS - LDHi3 Genotype:Wild-type | Treatment:LDHi RAW_FILE_NAME=LDHi-biological_independent3.raw SUBJECT_SAMPLE_FACTORS - Lactate1 Genotype:Wild-type | Treatment:Lactate RAW_FILE_NAME=Lactate-biological_independent1.raw SUBJECT_SAMPLE_FACTORS - Lactate2 Genotype:Wild-type | Treatment:Lactate RAW_FILE_NAME=Lactate-biological_independent2.raw SUBJECT_SAMPLE_FACTORS - Lactate3 Genotype:Wild-type | Treatment:Lactate RAW_FILE_NAME=Lactate-biological_independent3.raw #COLLECTION CO:COLLECTION_SUMMARY The eye organoids were collected and washed twice with PBS before pellets were CO:COLLECTION_SUMMARY flash-frozen and stored at −80°C until metabolite extraction. Three CO:COLLECTION_SUMMARY biologically independent repeated samples were collected. CO:SAMPLE_TYPE Retina #TREATMENT TR:TREATMENT_SUMMARY 13C-glucose labeling under three conditions: 13C-glucose = control, 13C-glucose TR:TREATMENT_SUMMARY + GNE-140 = LHDi, 13C-lactate in glucose free media mimicking the lack of TR:TREATMENT_SUMMARY glucose. All the organoids (50 organoids per condition) were washed with blank TR:TREATMENT_SUMMARY SILAC before being reconstituted in 13C medium at a concentration of 10 eye TR:TREATMENT_SUMMARY organoids/ml. #SAMPLEPREP SP:SAMPLEPREP_SUMMARY The eye organoids were collected and washed twice with PBS before pellets were SP:SAMPLEPREP_SUMMARY flash-frozen and stored at −80°C until metabolite extraction. Metabolite SP:SAMPLEPREP_SUMMARY analysis was performed as described previously (PMID: 33931446). Briefly, for SP:SAMPLEPREP_SUMMARY metabolite extraction, 80% methanol was used followed by the rapid freeze-thaw SP:SAMPLEPREP_SUMMARY method to break the tissues. The supernatant underwent speedvac drying. The SP:SAMPLEPREP_SUMMARY samples were prepared in 80% acetonitrile and were analyzed by High-Resolution SP:SAMPLEPREP_SUMMARY Liquid Chromatography Tandem Mass Spectrometry (LC-MS/MS). #CHROMATOGRAPHY CH:CHROMATOGRAPHY_TYPE HILIC CH:INSTRUMENT_NAME Q-exactive CH:COLUMN_NAME Waters XBridge BEH Amide (100 x 3.0mm, 3.5um) CH:SOLVENT_A 95% water/5% acetonitrile; 10 mM ammonium hydroxide; 10 mM ammonium acetate, pH CH:SOLVENT_A 9.0 CH:SOLVENT_B 100% acetonitrile CH:FLOW_GRADIENT 0 min, 15% A; 2.5 min, 30% A; 7 min, 43% A; 16 min, 62% A; 16.1-18 min, 75% A; CH:FLOW_GRADIENT 18-25 min, 15% A with a flow rate of 150 μL/min CH:FLOW_RATE 150 μL/mi CH:COLUMN_TEMPERATURE 40 #ANALYSIS AN:ANALYSIS_TYPE MS #MS MS:INSTRUMENT_NAME Thermo Q Exactive Orbitrap MS:INSTRUMENT_TYPE Orbitrap MS:MS_TYPE ESI MS:ION_MODE UNSPECIFIED MS:MS_COMMENTS The capillary of the ESI source was set to 275 °C, with sheath gas at 35 MS:MS_COMMENTS arbitrary units, auxiliary gas at 5 arbitrary units and the spray voltage at 4.0 MS:MS_COMMENTS kV. In positive/negative polarity switching mode, an m/z scan range from 60 to MS:MS_COMMENTS 900 was chosen and MS1 data was collected at a resolution of 70,000. The MS:MS_COMMENTS automatic gain control (AGC) target was set at 1 × 106 and the maximum MS:MS_COMMENTS injection time was 200 ms. The top 5 precursor ions were subsequently MS:MS_COMMENTS fragmented, in a data-dependent manner, using the higher energy collisional MS:MS_COMMENTS dissociation (HCD) cell set to 30% normalized collision energy in MS2 at a MS:MS_COMMENTS resolution power of 17,500. Besides matching m/z, metabolites are identified by MS:MS_COMMENTS matching either retention time with analytical standards and/or MS2 MS:MS_COMMENTS fragmentation pattern. Data acquisition and analysis were carried out by MS:MS_COMMENTS Xcalibur 4.1 software and Tracefinder 4.1 software, respectively (both from MS:MS_COMMENTS Thermo Fisher Scientific) #MS_METABOLITE_DATA MS_METABOLITE_DATA:UNITS Peak area MS_METABOLITE_DATA_START Samples Cont1 Cont2 Cont3 LDHi1 LDHi2 LDHi3 Lactate1 Lactate2 Lactate3 Factors Genotype:Wild-type | Treatment:Control Genotype:Wild-type | Treatment:Control Genotype:Wild-type | Treatment:Control Genotype:Wild-type | Treatment:LDHi Genotype:Wild-type | Treatment:LDHi Genotype:Wild-type | Treatment:LDHi Genotype:Wild-type | Treatment:Lactate Genotype:Wild-type | Treatment:Lactate Genotype:Wild-type | Treatment:Lactate Total Ion Count 2.74219E+11 1.95935E+11 1.65372E+11 1.6884E+11 2.11084E+11 2.0648E+11 1.94113E+11 1.81327E+11 1.42619E+11 1,3-diphosphoglycerate 0 0 0 0 0 0 0 0 0 1,3-diphosphoglycerate_13C1 0 0 0 0 0 0 0 0 0 1,3-diphosphoglycerate_13C2 0 0 0 0 0 0 0 0 0 1,3-diphosphoglycerate_13C3 0 0 0 0 0 0 0 0 0 2,3-diphosphoglycerate 1226510 235100 240971 230944 103710 538598 198479 175908 51342 2,3-diphosphoglycerate_13C1 0 0 0 0 0 0 0 0 0 2,3-diphosphoglycerate_13C2 0 0 0 0 0 0 0 0 0 2,3-diphosphoglycerate_13C3 0 0 0 0 0 0 0 0 0 2-HG 13243400 2834538 1689868 1538105 3170255 3782099 2818291 2857587 1359651 2-HG_13C1 840509 207721 128613 147545 209795 227504 146593 215557 86891 2-HG_13C2 16726 8390 7735 0 0 0 0 7455 0 2-HG_13C3 0 0 0 0 0 0 0 0 0 2-HG_13C4 0 0 6487 0 0 0 0 10865 0 2-HG_13C5 0 0 0 0 0 0 0 0 0 2/3-phosphoglycerate 1725483 98455 29702 87255 225243 261978 334537 138670 24683 2/3-phosphoglycerate_13C1 0 0 0 0 0 0 0 0 0 2/3-phosphoglycerate_13C2 147387 0 0 0 0 0 0 8476 0 2/3-phosphoglycerate_13C3 9292473 113452 86264 75360 734609 863373 39726 0 0 3-phospho-serine 9742279 1600883 1538324 0 147606 53374 1789246 1913503 723062 3-phospho-serine_13C1 186885 0 0 0 0 0 0 0 0 3-phospho-serine_13C2 0 0 0 0 0 0 0 0 0 3-phospho-serine_13C3 2334653 193942 240759 0 0 0 0 0 0 6-phospho-D-gluconate 17189 7327 8240 0 0 0 0 0 8530 6-phospho-D-gluconate_13C1 0 0 0 0 0 0 8041 0 0 6-phospho-D-gluconate_13C2 0 0 0 0 0 0 0 0 0 6-phospho-D-gluconate_13C3 0 0 0 0 0 0 0 0 0 6-phospho-D-gluconate_13C4 0 0 0 0 0 0 0 0 0 6-phospho-D-gluconate_13C5 0 0 0 0 0 0 0 0 0 6-phospho-D-gluconate_13C6 0 0 0 0 0 0 0 0 0 acetoacetic acid / succinic semialdehyde 0 0 0 0 0 0 0 0 0 acetoacetate / succinic semialdehyde_13C1 0 0 0 0 0 0 0 0 0 acetoacetate / succinic semialdehyde_13C2 0 0 0 0 0 0 0 0 0 acetoacetate / succinic semialdehyde_13C3 0 0 0 0 0 0 0 0 0 acetoacetate / succinic semialdehyde_13C4 0 0 0 0 0 0 0 0 0 acetyl-CoA + 337456 0 0 0 103059 24621 24085 36149 0 acetyl-CoA_13C1 + 23780 0 0 0 0 0 0 0 0 acetyl-CoA_13C2 + 0 0 0 0 0 0 0 0 0 aconitic acid - 7116027 882294 602630 22215 603661 607416 903682 1184024 346964 aconitic acid_13C1 - 368771 13707 9983 0 35236 18312 39213 42750 7673 aconitic acid_13C2 - 354232 10168 0 0 22906 14270 222770 259612 53499 adenosine 0 0 0 1226746 1396334 1801876 1803995 1736962 1692871 adenosine_13C10 0 0 0 0 0 0 0 0 0 adenosine_13C5 0 0 0 0 0 0 0 0 0 adenosine_13C6 0 0 0 0 0 0 0 0 0 adenosine_13C7 0 0 0 0 0 0 0 0 0 adenosine_13C8 0 0 0 0 0 0 0 0 0 adenosine_13C9 0 0 0 0 0 0 0 0 0 ADP / dGDP 18582485 2930296 3549412 5225530 11353928 9651870 9349445 9178396 3476648 ADP / dGDP_13C1 1728097 63717 71288 148462 897870 841679 687118 664976 119877 ADP / dGDP_13C10 0 0 0 0 0 0 0 0 0 ADP / dGDP_13C2 174343 0 0 0 18131 18851 20094 0 0 ADP / dGDP_13C3 0 0 0 0 0 0 0 0 0 ADP / dGDP_13C4 0 0 0 0 0 0 0 0 0 ADP / dGDP_13C5 1175920 0 0 0 0 0 0 0 0 ADP / dGDP_13C6 35484 0 0 0 0 0 0 0 0 ADP / dGDP_13C7 0 0 0 0 0 0 0 0 0 ADP / dGDP_13C8 0 0 0 0 0 0 0 0 0 ADP / dGDP_13C9 0 0 0 0 0 0 0 0 0 AICAR 819862 0 0 0 0 0 0 0 0 AICAR_13C5 4801188 411821 227457 0 17595 0 19148 0 0 AICAR_13C6 135065 0 0 0 0 0 0 0 0 AICAR_13C7 0 0 0 0 0 0 0 0 0 AICAR_13C8 0 0 0 0 0 0 0 0 0 AICAR_13C9 0 0 0 0 0 0 0 0 0 a-KG 15022110 2296224 2031671 407652 937684 931284 1414650 1827767 590097 a-KG_13C1 698540 65145 80590 0 15245 0 46663 71015 10178 a-KG_13C2 188026 0 0 105020 0 0 0 0 0 a-KG_13C3 0 0 0 0 0 0 0 0 0 a-KG_13C4 0 0 0 0 0 0 0 0 0 a-KG_13C5 0 0 0 0 0 0 0 0 0 alanine 25065233 6517719 3578383 7362929 14326378 12874303 5414129 6190067 2278860 alanine_13C1 796647 294508 273287 237877 561984 340258 224690 112041 167165 alanine_13C2 537997 92012 43712 61594 204301 151978 58044 52413 6592 alanine_13C3 21203179 3388168 2344610 3381440 8020927 6577821 2148662 2439866 932416 AMP / dGMP 9836118 3574625 2547477 7757264 15889849 14808144 3788059 3250957 1872121 AMP / dGMP_13C1 597068 68125 0 520316 1381246 1451389 95911 95668 0 AMP / dGMP_13C10 0 0 0 0 0 0 0 0 0 AMP / dGMP_13C2 0 0 0 0 19560 0 0 0 0 AMP / dGMP_13C5 0 0 0 0 0 0 0 0 0 AMP / dGMP_13C6 0 0 0 0 0 0 0 0 0 AMP / dGMP_13C7 0 0 0 0 0 0 0 0 0 AMP / dGMP_13C8 0 0 0 0 0 0 0 0 0 AMP / dGMP_13C9 0 0 0 0 0 0 0 0 0 aspartate 305091751 47212147 31202601 23365663 54054525 49652023 115701962 121280032 42549526 aspartate_13C1 14458310 1231801 1102132 683906 1737434 1043317 2727759 2818576 788307 aspartate_13C2 1477780 0 0 0 0 0 2804206 2749085 1001279 aspartate_13C3 14458310 1293277 1097233 605026 1737434 898304 2727759 2818576 851531 aspartate_13C4 0 0 0 0 0 0 0 0 0 ATP / dGTP 4123943 2555567 3013567 1238904 1355675 1078400 3917949 6164116 2836009 ATP / dGTP_13C10 0 0 0 0 0 0 0 0 0 ATP / dGTP_13C5 0 0 0 0 0 0 0 0 0 ATP / dGTP_13C6 0 0 0 0 0 0 0 0 0 ATP / dGTP_13C7 0 0 0 0 0 0 0 0 0 ATP / dGTP_13C8 252855 0 0 0 0 0 0 0 0 ATP / dGTP_13C9 16581 0 0 0 0 0 0 0 0 choline+ 9981125 10446513 10697606 9861465 9201055 10044140 9972884 9802173 8116464 choline_13C1+ 4017052 143204 189675 147494 59705 71205 140186 73131 136406 choline_13C2+ 0 0 0 0 0 0 0 0 0 choline_13C3+ 0 0 0 0 0 0 0 0 0 choline_13C4+ 0 0 0 0 0 0 0 0 0 choline_13C5+ 0 0 0 0 0 0 0 0 0 citrate(iso)/citrate 36431171 6402465 3414691 2307455 16204254 13795512 14209609 2733962 1536719 citrate(iso)/citrate_13C1 2104973 170757 0 8959 863876 754969 756752 40582 7335 citrate(iso)/citrate_13C2 319434 34429 0 9031 140533 138743 764541 40964 0 citrate(iso)/citrate_13C3 0 9531 0 0 0 0 11541 0 0 citrate(iso)/citrate_13C4 0 7084 0 0 0 0 0 0 8206 citrate(iso)/citrate_13C5 0 0 8542 10145 7340 11422 8213 0 0 citrate(iso)/citrate_13C6 0 0 0 0 0 0 0 8469 0 CMP 7400240 1000633 673348 2401071 5648886 4835005 1865382 1829868 567419 CMP_13C5 0 0 0 0 0 0 0 0 0 CMP_13C6 0 0 0 0 0 0 0 0 0 CMP_13C7 0 0 0 0 0 0 0 0 0 CMP_13C8 0 0 0 0 20389 0 0 0 0 CMP_13C9 0 0 0 0 0 0 0 0 0 Crotonyl-CoA 26537 0 15540 17705 22028 0 24605 0 0 CTP 9521665 1568254 1854123 414172 895014 818830 2840692 4140015 963334 CTP_13C5 0 0 0 0 0 0 0 0 0 CTP_13C6 0 0 0 0 0 0 0 0 0 CTP_13C7 0 0 0 0 0 0 0 0 0 CTP_13C8 0 0 0 0 0 0 0 0 0 CTP_13C9 0 0 0 0 0 0 0 0 0 cystathionine 3695618 3533037 2964077 3261146 5096524 3619768 4042573 5158438 2364758 cystathionine_13C1 0 0 18711 70892 81561 0 0 21001 0 cysteine 12299477 3200830 2030043 1149913 1819137 1552471 2807781 2963836 968797 cysteine_13C1 339724 23257 0 0 0 0 29696 34541 0 cysteine_13C2 0 0 0 0 0 0 0 0 0 cysteine_13C3 0 0 0 0 0 0 0 0 0 dATP 0 0 0 0 0 0 0 0 0 dATP_13C10 0 0 0 0 0 0 0 0 0 dATP_13C5 0 0 0 0 0 0 0 0 0 dATP_13C6 0 0 0 0 0 0 0 0 0 dATP_13C7 0 0 0 0 0 0 0 0 0 dATP_13C8 0 0 0 0 0 0 0 0 0 dATP_13C9 0 0 0 0 0 0 0 0 0 dCTP 0 0 0 0 0 0 0 0 0 dCTP_13C5 0 0 0 0 0 0 0 0 0 dCTP_13C6 0 0 0 0 0 0 0 0 0 dCTP_13C7 0 0 0 0 0 0 0 0 0 dCTP_13C8 0 0 0 0 0 0 0 0 0 dCTP_13C9 0 0 0 0 0 0 0 0 0 deoxyguanosine 0 0 0 0 0 0 0 0 0 deoxyguanosine_13C10 0 0 0 0 0 0 0 0 0 deoxyguanosine_13C5 0 0 0 0 0 0 0 0 0 deoxyguanosine_13C6 0 0 0 0 0 0 0 0 0 deoxyguanosine_13C7 0 0 0 0 0 0 0 0 0 deoxyguanosine_13C8 0 0 0 0 0 0 0 0 0 deoxyguanosine_13C9 0 0 0 0 0 0 0 0 0 D-galactosamine/glucosamine-1/6-phosphate 1014058 129212 82001 164324 306835 350058 142716 264690 48195 D-galactosamine/glucosamine-1/6-phosphate_13C6 146329 0 0 72545 441050 212788 0 0 0 GAP / DHAP 72491 0 6004 16601 93921 86425 16089 0 0 GAP / DHAP_13C1 0 0 0 0 0 0 0 0 0 GAP / DHAP_13C2 96642 0 0 0 107042 77898 0 0 0 GAP / DHAP_13C3 8147722 1549561 705858 2247197 6141906 4688137 555480 530691 174451 D-ribose-1/5-phosphate 842268 46602 28329 64352 290087 247252 63555 58998 16200 D-ribose-1/5-phosphate_13C1 0 0 0 0 0 0 0 0 0 D-ribose-1/5-phosphate_13C2 0 0 0 0 0 0 0 0 0 D-ribose-1/5-phosphate_13C3 0 0 0 0 16603 25854 0 0 0 D-ribose-1/5-phosphate_13C4 0 0 0 0 0 0 0 0 0 D-ribose-1/5-phosphate_13C5 316114 7861 0 34968 238824 183847 0 0 0 D-sedoheptulose-7-phosphate 539008 27745 8497 0 124575 79776 107880 48116 0 D-sedoheptulose-7-phosphate_13C1 0 0 0 0 0 0 0 0 0 D-sedoheptulose-7-phosphate_13C2 0 0 0 0 0 0 0 0 0 D-sedoheptulose-7-phosphate_13C3 0 0 0 0 0 0 0 0 0 D-sedoheptulose-7-phosphate_13C4 0 0 0 0 0 0 6894 0 0 D-sedoheptulose-7-phosphate_13C5 0 0 0 0 0 0 0 0 0 D-sedoheptulose-7-phosphate_13C6 0 0 0 0 0 0 0 0 0 D-sedoheptulose-7-phosphate_13C7 289871 0 0 9887 158037 122612 0 0 0 dTTP 0 0 0 12542 0 0 0 0 0 dTTP_13C10 0 0 0 0 0 0 0 0 0 dTTP_13C5 0 0 0 0 0 0 0 0 0 dTTP_13C6 0 0 0 0 0 0 0 0 0 dTTP_13C7 0 0 0 0 0 0 0 0 0 dTTP_13C8 0 0 0 0 0 0 0 0 0 dTTP_13C9 0 0 0 0 0 0 0 0 0 dUTP 0 0 0 0 0 0 0 0 0 dUTP_13C5 179963 109105 0 0 108233 100288 0 0 0 dUTP_13C6 0 0 0 0 0 27249 0 0 0 dUTP_13C7 0 0 0 0 0 0 0 0 0 dUTP_13C8 0 0 0 0 0 0 0 0 0 dUTP_13C9 0 0 0 0 21986 0 0 0 0 F-1,6/2,6-P 3392276 1135815 1127005 1214554 1196574 1109361 561993 302781 183487 F-1,6/2,6-P_13C1 43152 7498 6294 0 7632 0 0 0 0 F-1,6/2,6-P_13C2 0 0 0 0 15077 0 0 0 0 F-1,6/2,6-P_13C3 25550 0 0 281538 1760279 1410021 31162 0 0 F-1,6/2,6-P_13C4 7827 0 0 6631 106474 143805 0 0 0 F-1,6/2,6-P_13C5 329258 8136 0 501855 1746807 1545972 48163 0 0 F-1,6/2,6-P_13C6 7547299 1742326 1267705 7609010 18114025 26153553 4123345 1554816 865772 fructose / mannose 1673989 557788 276736 384629 865797 784827 476957 479910 313170 fumarate 9244783 2027593 1655997 1424563 2422532 2589033 3160691 3542559 1641549 fumarate_13C1 319685 24033 41858 34815 85135 110049 118548 128973 44826 fumarate_13C2 0 0 0 0 0 0 26507 39710 0 fumarate_13C3 0 0 0 0 0 0 0 0 0 fumarate_13C4 0 0 0 0 0 0 0 0 0 F6P/G1P/G6P 1473373 217184 96482 238266 576783 525972 182414 291325 45995 F6P/G1P/G6P_13C1 0 0 0 0 0 0 0 0 0 F6P/G1P/G6P_13C2 0 0 0 0 0 0 0 0 0 F6P/G1P/G6P_13C3 0 0 0 40912 174308 142393 0 0 0 F6P/G1P/G6P_13C4 0 0 0 0 0 0 0 0 0 F6P/G1P/G6P_13C5 224268 14698 0 58414 279987 198410 0 0 0 F6P/G1P/G6P_13C6 7569273 1185648 832533 2732288 5888819 5218650 NaN 0 0 galactose / glucose 2731847 1296918 376053 689833 1621080 2124220 589331 508274 463879 glucose_13C6 1022616392 583619356 184003185 181940935 391051946 303323058 0 0 0 glutamate 1164428382 260256195 169644273 171883247 371419947 317905280 270447701 316455919 115196889 glutamate_13C1 79939319 17107928 11254579 11400461 25001209 21505146 18653842 21431848 7789829 glutamate_13C2 9109483 1491961 909122 1780665 4497127 3924870 12988486 13584278 5081063 glutamate_13C3 416534 106546 67985 262915 191414 196857 646507 473733 244363 glutamate_13C4 0 0 0 0 0 0 86044 52579 15352 glutamate_13C5 0 0 0 0 0 0 0 0 0 glutamine 3358403145 1740426364 646761073 658155398 1278119570 1081467764 1311364235 974112581 413352557 glutamine_13C1 196454125 99456339 35538514 36947704 71901077 60652869 72961103 54404258 22038288 glutamine_13C2 0 0 0 0 0 0 0 0 0 glutamine_13C3 0 0 0 544419 0 241796 383563 0 0 glutamine_13C4 0 0 0 0 0 0 0 0 0 glutamine_13C5 0 33246 0 0 0 0 0 0 0 glutathione 331295700 42627620 47297012 45199653 81935212 77381479 46687762 79458054 29694821 glutathione_13C1 32911419 4225456 5075335 4813954 7965777 7324100 4849757 7746692 2933961 glutathione_13C2 2442994 116360 345158 75052 322483 134674 210621 380473 98451 glutathione_13C3 0 0 0 0 0 0 0 0 0 glutathione_13C4 0 0 0 0 0 0 0 0 0 glutathione_13C5 0 0 0 0 0 0 0 0 0 glutathione disulfide 1368723 560385 1492262 1717862 1028755 843039 453940 974957 1258980 glutathione disulfide_13C1 0 17862 0 0 0 0 0 63123 18371 glutathione disulfide_13C2 0 0 0 0 0 0 0 0 0 glutathione disulfide_13C3 0 0 0 0 0 0 0 0 0 glutathione disulfide_13C4 0 0 0 0 0 0 0 0 0 glutathione disulfide_13C5 0 0 0 0 0 0 0 0 0 glycerate 3600285 1083314 688015 995269 1570161 2167741 2714189 2435107 1179077 glycerate_13C1 212862 155576 148399 211884 122432 306435 198209 152919 53581 glycerate_13C2 33867 0 0 0 0 0 0 0 0 glycerate_13C3 2444037 466771 278793 219306 536002 371214 0 0 0 glycerol-2/3-phosphate 1932871 648055 450930 368548 650785 485436 241896 311733 88035 glycerol-2/3-phosphate_13C2 0 0 10296 7861 0 13083 0 7226 0 glycerol-2/3-phosphate_13C3 927800 19274 25955 432385 1259706 981191 0 0 0 glycine 184934967 52796263 24801421 24525007 57204709 46955455 49330644 45695905 16948791 glycine_13C1 2991209 847170 448865 492070 964965 706700 818840 733284 279327 glycine_13C2 1185463 210588 132541 0 0 0 0 0 0 GMP 1182464 195998 29257 1340544 3326175 3300893 363074 168299 57269 GMP_13C10 0 0 0 0 0 0 0 0 0 GMP_13C5 0 0 0 0 0 0 0 0 0 GMP_13C6 0 0 0 0 0 0 0 0 0 GMP_13C7 0 0 0 0 0 0 0 0 0 GMP_13C8 0 0 0 0 0 0 0 0 0 GMP_13C9 0 0 0 0 0 0 0 0 0 GTP 2859955 123822 345283 56130 413781 411226 521792 953124 69570 GTP_13C10 0 0 0 0 0 0 0 0 0 GTP_13C5 313202 0 40016 0 0 0 0 0 16482 GTP_13C6 0 0 0 0 18505 0 0 0 0 GTP_13C7 0 0 0 0 0 0 0 0 0 GTP_13C8 0 0 0 0 0 0 0 0 0 GTP_13C9 0 0 0 0 0 0 0 0 0 guanosine 13528966 2261203 1534190 3758632 9311364 8678446 2799345 2911729 1240997 guanosine_13C10 0 0 0 0 0 0 0 0 0 guanosine_13C5 201682 16698 0 23801 24645 0 0 0 0 guanosine_13C6 0 0 0 0 0 0 0 0 0 guanosine_13C7 0 0 0 0 0 0 0 0 0 guanosine_13C8 0 0 0 0 0 0 0 0 0 guanosine_13C9 0 0 0 0 0 0 0 22942 0 IDP 0 0 0 0 0 0 0 0 0 IDP_13C10 0 0 0 0 0 0 0 0 0 IDP_13C5 0 0 0 0 0 0 0 0 0 IDP_13C6 0 0 0 0 0 0 0 0 0 IDP_13C7 0 0 0 0 0 0 0 0 0 IDP_13C8 0 0 0 0 0 0 15489 0 0 IDP_13C9 0 0 0 0 0 0 0 0 0 IMP 1455630 318571 73794 519857 1594284 1703680 97441 43237 36556 IMP_13C10 0 0 0 0 0 0 0 0 0 IMP_13C5 665474 19339 0 0 0 0 0 0 0 IMP_13C6 0 0 0 0 0 0 0 0 0 IMP_13C7 105540 94170 177684 32047 199181 379876 96080 202322 24197 IMP_13C8 24078 0 0 0 14000 0 0 41356 0 IMP_13C9 0 0 0 0 0 0 0 0 0 itaconic acid 0 0 0 0 0 0 0 0 0 itaconic acid_13C1 0 0 0 0 0 0 0 0 0 itaconic acid_13C2 0 0 0 0 0 0 0 0 0 lactate 249202576 65226445 41286092 71783986 138424200 108418011 91407007 70388425 46296015 lactate_13C1 7345963 2416959 2275117 2653238 4276654 4067520 1088077 1749458 851124 lactate_13C2 13590376 4265903 1250352 23212 249312 255058 48348842 33931414 15202929 lactate_13C3 501632847 189199226 79693023 11863021 26831739 24830137 1902027763 1389055916 675270166 leucine / leucine(iso) 3812808335 2017362347 714350392 706607658 1555202330 1245709682 1574499307 1137999514 500708200 leucine / leucine(iso)_13C1 258380172 136024563 47026974 47978987 104223789 83318178 105057774 76005213 33309954 leucine / leucine(iso)_13C2 5284187 2703075 423278 921056 2143603 1709757 2147903 689079 329316 leucine / leucine(iso)_13C3 0 0 0 0 0 0 0 0 0 leucine / leucine(iso)_13C6 0 0 0 0 0 0 0 0 0 malate 1054323529 59379313 26651176 17656210 77382024 68208412 77151886 123662273 20301565 malate_13C1 44297151 2266594 1034021 758137 3024591 2801424 3079373 3562967 1124153 malate_13C2 2954319 698977 473769 1715464 549339 1101645 1952742 1801307 1197731 malate_13C3 12549568 787295 431189 101502 486523 493862 104755 96839 9444 malate_13C4 335731 65160 103970 253677 183738 214671 160739 141794 69055 mevalonate 0 0 0 0 0 0 0 0 0 mevalonate_13C1 0 0 0 0 0 0 0 0 0 mevalonate_13C2 0 0 0 0 0 0 0 0 0 mevalonate_13C3 0 0 0 0 0 0 0 0 0 mevalonate_13C4 0 0 0 0 0 0 0 0 0 mevalonate_13C5 0 0 0 0 0 0 0 0 0 mevalonate_13C6 0 0 0 0 0 0 0 0 0 N-acetyl-glucosamine-1/6-phosphate 504663 17746 0 0 85625 143120 52063 31695 8219 N-acetyl-glucosamine-1/6-phosphate_13C6 0 0 0 0 0 0 0 0 0 N-acetyl-glucosamine-1/6-phosphate_13C8 0 0 0 0 8504 0 0 0 0 NAD+ 26608927 5107379 3288637 3147748 6933227 5888028 6702567 7767395 2832174 NADH 1876383 274129 181152 1036977 2451017 2195392 172767 234527 51659 NADP+ 0 0 0 0 0 0 0 0 0 NADPH 197816 0 0 0 0 0 0 17360 0 N-carbamoyl-L-aspartate 2059661 161778 88095 8698 17816 26016 72636 64735 9692 N-carbamoyl-L-aspartate_13C1 83000 0 9147 0 0 0 0 0 0 N-carbamoyl-L-aspartate_13C2 0 0 0 0 0 0 0 0 0 N-carbamoyl-L-aspartate_13C3 21782 0 0 0 0 0 0 0 0 N-carbamoyl-L-aspartate_13C4 0 0 0 0 0 0 0 0 0 N-carbamoyl-L-aspartate_13C5 0 0 0 0 0 0 0 0 0 oxaloacetate 76277 10781 6869 9456 0 0 0 0 0 oxaloacetate_13C1 0 0 0 0 0 0 0 0 0 oxaloacetate_13C2 0 0 0 0 0 0 0 0 0 oxaloacetate_13C3 0 0 0 0 0 0 0 0 0 oxaloacetate_13C4 27284 10223 9775 15997 19312 0 24777 6489 12916 phosphoenolpyruvate 420844 0 0 0 9684 17898 71163 10005 0 phosphoenolpyruvate_13C1 0 0 0 0 0 0 0 0 0 phosphoenolpyruvate_13C2 81982 25877 19518 37504 65655 10179 12711 26544 32137 phosphoenolpyruvate_13C3 4264453 0 0 0 84309 81154 0 0 0 PRPP 0 0 0 0 0 0 0 0 0 PRPP_13C1 0 0 0 0 0 0 0 0 0 PRPP_13C2 0 0 0 0 0 0 0 0 0 PRPP_13C3 0 0 0 0 0 0 0 0 0 PRPP_13C4 0 0 0 0 0 0 0 0 0 PRPP_13C5 0 0 0 0 0 0 0 0 0 pyruvate 4956383 1354548 449550 1847180 4651110 3472176 930335 2628428 464500 pyruvate_13C1 103787 44397 95006 147168 147596 115938 64715 112021 88610 pyruvate_13C2 0 0 0 0 0 0 0 0 0 pyruvate_13C3 2646044 704464 767842 346287 862294 1224200 1545582 1464988 509933 S-adenosyl-L-homoCysteine 3636733 436668 158877 375973 996632 1018311 813198 692162 254222 S-adenosyl-L-homoCysteine_13C1 0 0 0 30374 47600 71345 0 0 0 S-adenosyl-L-methionine 7852711 1129434 896807 1096529 2802215 2442591 1916272 2040680 608925 S-adenosyl-L-methionine_13C1 1346553 20088 0 71613 333362 274302 178720 146500 0 S-adenosyl-L-methionine_13C2 16655 0 0 0 0 0 0 0 0 S-adenosyl-L-methionine_13C3 0 0 0 0 0 0 0 0 18286 S-adenosyl-L-methionine_13C4 0 0 0 0 0 0 0 0 15042 S-adenosyl-L-methionine_13C5 0 0 0 35530 0 0 0 0 0 S-adenosyl-L-methionine_13C6 0 0 0 0 0 0 0 0 0 S-adenosyl-L-methionine_13C7 0 0 0 0 0 0 0 0 0 S-adenosyl-L-methionine_13C8 0 0 0 0 0 0 0 0 0 S-adenosyl-L-methionine_13C9 15959 0 38974 25433 0 0 19875 0 0 serine 184223283 61196392 27237728 29886994 62694576 49815063 50682894 41047248 16771491 serine_13C1 6873451 2036826 913460 774342 1720594 1345522 1569176 1145532 418669 serine_13C2 589832 21196 17558 0 0 0 0 0 0 serine_13C3 8405777 1635573 951110 36885 129457 77446 0 0 0 sorbitol / galactitol / L-iditol / manitol 4440817 1214072 1222270 1337916 2549557 2127565 1552802 1371577 1064524 sorbitol / galactitol / L-iditol / manitol_13C6 1355269 170023 82679 147060 338056 275843 0 0 0 succinate 62366045 23427081 17513209 14055534 17039255 16890295 21309669 31892542 16699416 succinate_13C1 2237027 1000227 563200 733839 545361 768578 1170564 1246980 634023 succinate_13C2 0 0 0 0 0 0 0 0 0 succinate_13C3 13301 21708 0 16502 0 12403 11108 0 0 succinate_13C4 15259 0 0 11543 0 12373 0 0 21686 thiamine diphosphate+ 0 0 0 0 0 0 0 0 0 thiamine phosphate+ 0 0 0 0 0 0 0 0 0 thiamine+ 128282127 95549714 37747277 33960653 57261030 43739931 57714210 46408204 26019896 UDP-N-acetyl-galactosamine/glucosamine 10596080 1797720 1281762 1648763 3439329 3199766 2550573 2618719 870957 UDP-N-acetyl-galactosamine/glucosamine_13C13 0 0 0 0 0 0 0 0 0 UDP-N-acetyl-galactosamine/glucosamine_13C6 351185 46148 0 0 11478 0 0 0 0 UDP-N-acetyl-galactosamine/glucosamine_13C8 18132 0 0 0 0 0 0 0 0 UMP 1462623 168682 92604 604213 1556143 1479399 460574 388883 38487 UMP_13C5 0 8873 0 0 0 0 0 0 0 UMP_13C6 0 0 0 0 0 0 0 0 0 UMP_13C7 0 0 0 0 0 0 0 0 0 UMP_13C8 2695405 595445 327434 353858 976365 890488 734906 802270 180193 UMP_13C9 298019 40869 11420 28485 87506 71628 38951 113501 11889 UTP 1405026 368261 529806 21462 80131 40182 377110 351697 76232 UTP_13C5 130021 14427 37281 0 0 0 0 0 0 UTP_13C6 1434562 66371 0 0 123626 199054 79236 0 0 UTP_13C7 82533 0 0 0 0 0 0 0 0 UTP_13C8 0 0 0 0 0 0 0 0 0 UTP_13C9 0 0 0 0 0 85395 0 0 0 xylitol / arabitol / ribito 0 0 0 0 0 0 0 0 0 xylitol / arabitol / ribito_13C5 0 0 0 0 10477 16101 0 0 0 MS_METABOLITE_DATA_END #METABOLITES METABOLITES_START metabolite_name Total Ion Count 1,3-diphosphoglycerate 1,3-diphosphoglycerate_13C1 1,3-diphosphoglycerate_13C2 1,3-diphosphoglycerate_13C3 2,3-diphosphoglycerate 2,3-diphosphoglycerate_13C1 2,3-diphosphoglycerate_13C2 2,3-diphosphoglycerate_13C3 2-HG 2-HG_13C1 2-HG_13C2 2-HG_13C3 2-HG_13C4 2-HG_13C5 2/3-phosphoglycerate 2/3-phosphoglycerate_13C1 2/3-phosphoglycerate_13C2 2/3-phosphoglycerate_13C3 3-phospho-serine 3-phospho-serine_13C1 3-phospho-serine_13C2 3-phospho-serine_13C3 6-phospho-D-gluconate 6-phospho-D-gluconate_13C1 6-phospho-D-gluconate_13C2 6-phospho-D-gluconate_13C3 6-phospho-D-gluconate_13C4 6-phospho-D-gluconate_13C5 6-phospho-D-gluconate_13C6 acetoacetic acid / succinic semialdehyde acetoacetate / succinic semialdehyde_13C1 acetoacetate / succinic semialdehyde_13C2 acetoacetate / succinic semialdehyde_13C3 acetoacetate / succinic semialdehyde_13C4 acetyl-CoA + acetyl-CoA_13C1 + acetyl-CoA_13C2 + aconitic acid - aconitic acid_13C1 - aconitic acid_13C2 - adenosine adenosine_13C10 adenosine_13C5 adenosine_13C6 adenosine_13C7 adenosine_13C8 adenosine_13C9 ADP / dGDP ADP / dGDP_13C1 ADP / dGDP_13C10 ADP / dGDP_13C2 ADP / dGDP_13C3 ADP / dGDP_13C4 ADP / dGDP_13C5 ADP / dGDP_13C6 ADP / dGDP_13C7 ADP / dGDP_13C8 ADP / dGDP_13C9 AICAR AICAR_13C5 AICAR_13C6 AICAR_13C7 AICAR_13C8 AICAR_13C9 a-KG a-KG_13C1 a-KG_13C2 a-KG_13C3 a-KG_13C4 a-KG_13C5 alanine alanine_13C1 alanine_13C2 alanine_13C3 AMP / dGMP AMP / dGMP_13C1 AMP / dGMP_13C10 AMP / dGMP_13C2 AMP / dGMP_13C5 AMP / dGMP_13C6 AMP / dGMP_13C7 AMP / dGMP_13C8 AMP / dGMP_13C9 aspartate aspartate_13C1 aspartate_13C2 aspartate_13C3 aspartate_13C4 ATP / dGTP ATP / dGTP_13C10 ATP / dGTP_13C5 ATP / dGTP_13C6 ATP / dGTP_13C7 ATP / dGTP_13C8 ATP / dGTP_13C9 choline+ choline_13C1+ choline_13C2+ choline_13C3+ choline_13C4+ choline_13C5+ citrate(iso)/citrate citrate(iso)/citrate_13C1 citrate(iso)/citrate_13C2 citrate(iso)/citrate_13C3 citrate(iso)/citrate_13C4 citrate(iso)/citrate_13C5 citrate(iso)/citrate_13C6 CMP CMP_13C5 CMP_13C6 CMP_13C7 CMP_13C8 CMP_13C9 Crotonyl-CoA CTP CTP_13C5 CTP_13C6 CTP_13C7 CTP_13C8 CTP_13C9 cystathionine cystathionine_13C1 cysteine cysteine_13C1 cysteine_13C2 cysteine_13C3 dATP dATP_13C10 dATP_13C5 dATP_13C6 dATP_13C7 dATP_13C8 dATP_13C9 dCTP dCTP_13C5 dCTP_13C6 dCTP_13C7 dCTP_13C8 dCTP_13C9 deoxyguanosine deoxyguanosine_13C10 deoxyguanosine_13C5 deoxyguanosine_13C6 deoxyguanosine_13C7 deoxyguanosine_13C8 deoxyguanosine_13C9 D-galactosamine/glucosamine-1/6-phosphate D-galactosamine/glucosamine-1/6-phosphate_13C6 GAP / DHAP GAP / DHAP_13C1 GAP / DHAP_13C2 GAP / DHAP_13C3 D-ribose-1/5-phosphate D-ribose-1/5-phosphate_13C1 D-ribose-1/5-phosphate_13C2 D-ribose-1/5-phosphate_13C3 D-ribose-1/5-phosphate_13C4 D-ribose-1/5-phosphate_13C5 D-sedoheptulose-7-phosphate D-sedoheptulose-7-phosphate_13C1 D-sedoheptulose-7-phosphate_13C2 D-sedoheptulose-7-phosphate_13C3 D-sedoheptulose-7-phosphate_13C4 D-sedoheptulose-7-phosphate_13C5 D-sedoheptulose-7-phosphate_13C6 D-sedoheptulose-7-phosphate_13C7 dTTP dTTP_13C10 dTTP_13C5 dTTP_13C6 dTTP_13C7 dTTP_13C8 dTTP_13C9 dUTP dUTP_13C5 dUTP_13C6 dUTP_13C7 dUTP_13C8 dUTP_13C9 F-1,6/2,6-P F-1,6/2,6-P_13C1 F-1,6/2,6-P_13C2 F-1,6/2,6-P_13C3 F-1,6/2,6-P_13C4 F-1,6/2,6-P_13C5 F-1,6/2,6-P_13C6 fructose / mannose fumarate fumarate_13C1 fumarate_13C2 fumarate_13C3 fumarate_13C4 F6P/G1P/G6P F6P/G1P/G6P_13C1 F6P/G1P/G6P_13C2 F6P/G1P/G6P_13C3 F6P/G1P/G6P_13C4 F6P/G1P/G6P_13C5 F6P/G1P/G6P_13C6 galactose / glucose glucose_13C6 glutamate glutamate_13C1 glutamate_13C2 glutamate_13C3 glutamate_13C4 glutamate_13C5 glutamine glutamine_13C1 glutamine_13C2 glutamine_13C3 glutamine_13C4 glutamine_13C5 glutathione glutathione_13C1 glutathione_13C2 glutathione_13C3 glutathione_13C4 glutathione_13C5 glutathione disulfide glutathione disulfide_13C1 glutathione disulfide_13C2 glutathione disulfide_13C3 glutathione disulfide_13C4 glutathione disulfide_13C5 glycerate glycerate_13C1 glycerate_13C2 glycerate_13C3 glycerol-2/3-phosphate glycerol-2/3-phosphate_13C2 glycerol-2/3-phosphate_13C3 glycine glycine_13C1 glycine_13C2 GMP GMP_13C10 GMP_13C5 GMP_13C6 GMP_13C7 GMP_13C8 GMP_13C9 GTP GTP_13C10 GTP_13C5 GTP_13C6 GTP_13C7 GTP_13C8 GTP_13C9 guanosine guanosine_13C10 guanosine_13C5 guanosine_13C6 guanosine_13C7 guanosine_13C8 guanosine_13C9 IDP IDP_13C10 IDP_13C5 IDP_13C6 IDP_13C7 IDP_13C8 IDP_13C9 IMP IMP_13C10 IMP_13C5 IMP_13C6 IMP_13C7 IMP_13C8 IMP_13C9 itaconic acid itaconic acid_13C1 itaconic acid_13C2 lactate lactate_13C1 lactate_13C2 lactate_13C3 leucine / leucine(iso) leucine / leucine(iso)_13C1 leucine / leucine(iso)_13C2 leucine / leucine(iso)_13C3 leucine / leucine(iso)_13C6 malate malate_13C1 malate_13C2 malate_13C3 malate_13C4 mevalonate mevalonate_13C1 mevalonate_13C2 mevalonate_13C3 mevalonate_13C4 mevalonate_13C5 mevalonate_13C6 N-acetyl-glucosamine-1/6-phosphate N-acetyl-glucosamine-1/6-phosphate_13C6 N-acetyl-glucosamine-1/6-phosphate_13C8 NAD+ NADH NADP+ NADPH N-carbamoyl-L-aspartate N-carbamoyl-L-aspartate_13C1 N-carbamoyl-L-aspartate_13C2 N-carbamoyl-L-aspartate_13C3 N-carbamoyl-L-aspartate_13C4 N-carbamoyl-L-aspartate_13C5 oxaloacetate oxaloacetate_13C1 oxaloacetate_13C2 oxaloacetate_13C3 oxaloacetate_13C4 phosphoenolpyruvate phosphoenolpyruvate_13C1 phosphoenolpyruvate_13C2 phosphoenolpyruvate_13C3 PRPP PRPP_13C1 PRPP_13C2 PRPP_13C3 PRPP_13C4 PRPP_13C5 pyruvate pyruvate_13C1 pyruvate_13C2 pyruvate_13C3 S-adenosyl-L-homoCysteine S-adenosyl-L-homoCysteine_13C1 S-adenosyl-L-methionine S-adenosyl-L-methionine_13C1 S-adenosyl-L-methionine_13C2 S-adenosyl-L-methionine_13C3 S-adenosyl-L-methionine_13C4 S-adenosyl-L-methionine_13C5 S-adenosyl-L-methionine_13C6 S-adenosyl-L-methionine_13C7 S-adenosyl-L-methionine_13C8 S-adenosyl-L-methionine_13C9 serine serine_13C1 serine_13C2 serine_13C3 sorbitol / galactitol / L-iditol / manitol sorbitol / galactitol / L-iditol / manitol_13C6 succinate succinate_13C1 succinate_13C2 succinate_13C3 succinate_13C4 thiamine diphosphate+ thiamine phosphate+ thiamine+ UDP-N-acetyl-galactosamine/glucosamine UDP-N-acetyl-galactosamine/glucosamine_13C13 UDP-N-acetyl-galactosamine/glucosamine_13C6 UDP-N-acetyl-galactosamine/glucosamine_13C8 UMP UMP_13C5 UMP_13C6 UMP_13C7 UMP_13C8 UMP_13C9 UTP UTP_13C5 UTP_13C6 UTP_13C7 UTP_13C8 UTP_13C9 xylitol / arabitol / ribito xylitol / arabitol / ribito_13C5 METABOLITES_END #END