#METABOLOMICS WORKBENCH sjena_Purdue_20231116_080800 DATATRACK_ID:4467 STUDY_ID:ST002978 ANALYSIS_ID:AN004892 PROJECT_ID:PR001854 VERSION 1 CREATED_ON November 16, 2023, 10:43 am #PROJECT PR:PROJECT_TITLE Metabolite Profiling Of Vaginal Microbes In Suspension And Biofilm Cultures: PR:PROJECT_TITLE Potential Target Against Bacterial Vaginosis PR:PROJECT_SUMMARY This study facilitates better understanding of the differential metabolism and PR:PROJECT_SUMMARY growth requirements of vaginal microbes in suspension and biofilm growth PR:PROJECT_SUMMARY conditions. Comparison of metabolite profiles between Bacterial Vaginosis (BV) PR:PROJECT_SUMMARY associated, protective and intermediate microbes for identifying target PR:PROJECT_SUMMARY metabolite to manipulate growth and biofilm formation of Lactobacillus crispatus PR:PROJECT_SUMMARY and Gardnerella vaginalis as a therapeutic approach against BV. PR:INSTITUTE Purdue University PR:DEPARTMENT BME PR:LABORATORY Brubaker Lab PR:LAST_NAME Jena PR:FIRST_NAME Smrutiti PR:ADDRESS S. martin Jischke drive PR:EMAIL sjena@purdue.edu PR:PHONE 5715659650 #STUDY ST:STUDY_TITLE Metabolite Profiling Of Vaginal Microbes In Suspension And Biofilm Cultures: ST:STUDY_TITLE Potential Target Against Bacterial Vaginosis ST:STUDY_SUMMARY This study facilitates better understanding of the differential metabolism and ST:STUDY_SUMMARY growth requirements of vaginal microbes in suspension and biofilm growth ST:STUDY_SUMMARY conditions. Comparison of metabolite profiles between Bacterial Vaginosis (BV) ST:STUDY_SUMMARY associated, protective and intermediate microbes for identifying target ST:STUDY_SUMMARY metabolite to manipulate growth and biofilm formation of Lactobacillus crispatus ST:STUDY_SUMMARY and Gardnerella vaginalis as a therapeutic approach against BV. ST:INSTITUTE Purdue University ST:DEPARTMENT BME ST:LABORATORY Brubaker Lab ST:LAST_NAME Jena ST:FIRST_NAME Smrutiti ST:ADDRESS S. martin Jischke drive ST:EMAIL sjena@purdue.edu ST:PHONE 5715659650 ST:NUM_GROUPS 10 ST:TOTAL_SUBJECTS 3 ST:NUM_MALES NA ST:NUM_FEMALES NA #SUBJECT SU:SUBJECT_TYPE Bacteria SU:SUBJECT_SPECIES Lactobacillus crispatus; Gardenerella vaginalis; Lactobacillus iners SU:TAXONOMY_ID ATCC33820; ATCC55195; ATCC14018 SU:GENOTYPE_STRAIN DSM 20584; ATCC55195; ATCC14018 SU:CELL_BIOSOURCE_OR_SUPPLIER ATCC SU:CELL_STRAIN_DETAILS Lactobacillus crispatus, Lactobacillus iners, Gardnerella vaginalis #SUBJECT_SAMPLE_FACTORS: SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Raw file names and additional sample data SUBJECT_SAMPLE_FACTORS - L_cris_S Sample type:L. crispatus suspension Replicate=1 SUBJECT_SAMPLE_FACTORS - L_cris_S.1 Sample type:L. crispatus suspension Replicate=2 SUBJECT_SAMPLE_FACTORS - L_cris_S.2 Sample type:L. crispatus suspension Replicate=3 SUBJECT_SAMPLE_FACTORS - L_cris_B Sample type:L. crispatus biofilm Replicate=1 SUBJECT_SAMPLE_FACTORS - L_cris_B.1 Sample type:L. crispatus biofilm Replicate=2 SUBJECT_SAMPLE_FACTORS - L_cris_B.2 Sample type:L. crispatus biofilm Replicate=3 SUBJECT_SAMPLE_FACTORS - L_iners_S Sample type:L. iners suspension Replicate=1 SUBJECT_SAMPLE_FACTORS - L_iners_S.1 Sample type:L. iners suspension Replicate=2 SUBJECT_SAMPLE_FACTORS - L_iners_S.2 Sample type:L. iners suspension Replicate=3 SUBJECT_SAMPLE_FACTORS - G_vag_S Sample type:G. vaginalis suspension Replicate=1 SUBJECT_SAMPLE_FACTORS - G_vag_S.1 Sample type:G. vaginalis suspension Replicate=2 SUBJECT_SAMPLE_FACTORS - G_vag_S.2 Sample type:G. vaginalis suspension Replicate=3 SUBJECT_SAMPLE_FACTORS - G_vag_B1 Sample type:G. vaginalis biofilm #1 Replicate=1 SUBJECT_SAMPLE_FACTORS - G_vag_B1.1 Sample type:G. vaginalis biofilm #1 Replicate=2 SUBJECT_SAMPLE_FACTORS - G_vag_B1.2 Sample type:G. vaginalis biofilm #1 Replicate=3 SUBJECT_SAMPLE_FACTORS - G_vag_B2 Sample type:G. vaginalis biofilm #2 Replicate=1 SUBJECT_SAMPLE_FACTORS - G_vag_B2.1 Sample type:G. vaginalis biofilm #2 Replicate=2 SUBJECT_SAMPLE_FACTORS - G_vag_B2.2 Sample type:G. vaginalis biofilm #2 Replicate=3 SUBJECT_SAMPLE_FACTORS - BL_MRS Sample type:Blank media, MRS Replicate=1 SUBJECT_SAMPLE_FACTORS - BL_MRS.1 Sample type:Blank media, MRS Replicate=2 SUBJECT_SAMPLE_FACTORS - BL_MRS.2 Sample type:Blank media, MRS Replicate=3 SUBJECT_SAMPLE_FACTORS - BL_NYC Sample type:Blank media, NYC Replicate=1 SUBJECT_SAMPLE_FACTORS - BL_NYC.1 Sample type:Blank media, NYC Replicate=2 SUBJECT_SAMPLE_FACTORS - BL_NYC.2 Sample type:Blank media, NYC Replicate=3 SUBJECT_SAMPLE_FACTORS - BL_BHI Sample type:Blank media, BHI Replicate=1 SUBJECT_SAMPLE_FACTORS - BL_BHI.1 Sample type:Blank media, BHI Replicate=2 SUBJECT_SAMPLE_FACTORS - BL_BHI.2 Sample type:Blank media, BHI Replicate=3 SUBJECT_SAMPLE_FACTORS - Bl_sBHI Sample type:Blank media, sBHI Replicate=1 SUBJECT_SAMPLE_FACTORS - Bl_sBHI.1 Sample type:Blank media, sBHI Replicate=2 SUBJECT_SAMPLE_FACTORS - Bl_sBHI.2 Sample type:Blank media, sBHI Replicate=3 #COLLECTION CO:COLLECTION_SUMMARY L. crispatus cultures were grown in MRS media at 37oC, 5% CO2 for 24 and 48 CO:COLLECTION_SUMMARY hours to grow suspension and biofilm respectively. L. iners suspension cultures CO:COLLECTION_SUMMARY were grown in BHI at 37oC, 5% CO2 for 24hrs. G. vaginalis suspension and biofilm CO:COLLECTION_SUMMARY type I was grown in NYCIII at 37oC, 5% CO2 for 24 and 48 hours respectively. The CO:COLLECTION_SUMMARY type II biofilm of G. vaginalis was grown in supplemented BHI in the same CO:COLLECTION_SUMMARY incubation conditions as biofilm type I. All suspension cultures were grown on CO:COLLECTION_SUMMARY shakers and biofilms were grown as static cultures. The cultures were then CO:COLLECTION_SUMMARY centrifuged at 4000g for 8mins and filtered using 0.2micron syringe filter. The CO:COLLECTION_SUMMARY sample were then shipped with dry ice in triplicates to the metabolomics CO:COLLECTION_SUMMARY facility. CO:COLLECTION_PROTOCOL_FILENAME Smrutiti_Vag Sample collection Protocol CO:SAMPLE_TYPE Bacterial cells CO:COLLECTION_METHOD Centrifugation CO:COLLECTION_LOCATION Purdue University CO:VOLUMEORAMOUNT_COLLECTED 5ml CO:STORAGE_CONDITIONS -80? CO:COLLECTION_VIALS tubes CO:STORAGE_VIALS Cryovials CO:COLLECTION_TUBE_TEMP 4 #TREATMENT TR:TREATMENT_SUMMARY No treatment #SAMPLEPREP SP:SAMPLEPREP_SUMMARY Samples were prepared using the automated MicroLab STAR® system from Hamilton SP:SAMPLEPREP_SUMMARY Company. Several recovery standards were added prior to the first step in the SP:SAMPLEPREP_SUMMARY extraction process for QC purposes. To remove protein, dissociate small SP:SAMPLEPREP_SUMMARY molecules bound to protein or trapped in the precipitated protein matrix, and to SP:SAMPLEPREP_SUMMARY recover chemically diverse metabolites, proteins were precipitated with methanol SP:SAMPLEPREP_SUMMARY under vigorous shaking for 2 min (Glen Mills GenoGrinder 2000) followed by SP:SAMPLEPREP_SUMMARY centrifugation. The resulting extract was divided into five fractions: two for SP:SAMPLEPREP_SUMMARY analysis by two separate reverse phase (RP)/UPLC-MS/MS methods with positive ion SP:SAMPLEPREP_SUMMARY mode electrospray ionization (ESI), one for analysis by RP/UPLC-MS/MS with SP:SAMPLEPREP_SUMMARY negative ion mode ESI, one for analysis by HILIC/UPLC-MS/MS with negative ion SP:SAMPLEPREP_SUMMARY mode ESI, and one sample was reserved for backup. Samples were placed briefly on SP:SAMPLEPREP_SUMMARY a TurboVap® (Zymark) to remove the organic solvent. The sample extracts were SP:SAMPLEPREP_SUMMARY stored overnight under nitrogen before preparation for analysis. SP:SAMPLEPREP_PROTOCOL_FILENAME Smrutiti_Vag Sample collection protocol, Smrutiti_Vag Metabolomics Protocol SP:PROCESSING_STORAGE_CONDITIONS -80? #CHROMATOGRAPHY CH:CHROMATOGRAPHY_SUMMARY Low pH Lipophilic (LC/MS Pos late) CH:CHROMATOGRAPHY_TYPE Reversed phase CH:INSTRUMENT_NAME Waters Acquity CH:COLUMN_NAME Waters Acquity BEH C18 (100 x 2mm, 1.7um) CH:SOLVENT_A 100% water; 0.1% formic acid; 0.05% PFPA, pH ~2.5 CH:SOLVENT_B 50% methanol/50% acetonitrile; 0.1% formic acid; 0.05% PFPA, pH ~2.5 CH:FLOW_GRADIENT Linear gradient from 40% B to 99.5% B over 1.0 minute, hold 99.5% B for 2.4 CH:FLOW_GRADIENT minutes. CH:FLOW_RATE 0.60 mL/min CH:COLUMN_TEMPERATURE 40-50 #ANALYSIS AN:ANALYSIS_TYPE MS #MS MS:INSTRUMENT_NAME Thermo Q Exactive Orbitrap MS:INSTRUMENT_TYPE Orbitrap MS:MS_TYPE Other MS:ION_MODE POSITIVE MS:MS_COMMENTS Metabolon (LC/MS Pos late) #MS_METABOLITE_DATA MS_METABOLITE_DATA:UNITS pmol/l MS_METABOLITE_DATA_START Metabolite_name L_cris_S L_cris_S.1 L_cris_S.2 L_cris_B L_cris_B.1 L_cris_B.2 L_iners_S L_iners_S.1 L_iners_S.2 G_vag_S G_vag_S.1 G_vag_S.2 G_vag_B1 G_vag_B1.1 G_vag_B1.2 G_vag_B2 G_vag_B2.1 G_vag_B2.2 BL_MRS BL_MRS.1 BL_MRS.2 BL_NYC BL_NYC.1 BL_NYC.2 BL_BHI BL_BHI.1 BL_BHI.2 Bl_sBHI Bl_sBHI.1 Bl_sBHI.2 1-(1-enyl-palmitoyl)-2-linoleoyl-GPC (P-16:0/18:2)* 0.5774166 0.5774166 0.5774166 0.5774166 0.5774166 0.5774166 0.5774166 0.5774166 0.5774166 0.629447106 0.5774166 0.598578167 1.031550981 1.148321091 1.184329995 0.5774166 0.5774166 0.5774166 0.5774166 0.5774166 0.5774166 1.123674572 1.170620943 1.101294699 0.5774166 0.5774166 0.5774166 0.5774166 0.5774166 0.5774166 1-(1-enyl-palmitoyl)-2-linoleoyl-GPE (P-16:0/18:2)* 0.495671787 0.495671787 0.495671787 0.495671787 0.495671787 0.495671787 0.495671787 0.495671787 0.495671787 0.495671787 0.685100595 0.638520466 0.905181468 0.950893859 1.143782843 0.495671787 0.495671787 0.495671787 0.495671787 0.495671787 0.495671787 1.049106141 1.197461659 1.068721787 0.495671787 0.495671787 0.495671787 0.495671787 0.495671787 0.495671787 1-(1-enyl-palmitoyl)-GPC (P-16:0)* 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 1.017942967 0.782316307 1 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 0.782316307 1-(1-enyl-stearoyl)-2-linoleoyl-GPE (P-18:0/18:2)* 0.467939503 0.467939503 0.467939503 0.467939503 0.467939503 0.467939503 0.467939503 0.467939503 0.467939503 0.593132896 0.467939503 0.556887814 0.998437633 1.097378391 0.965710161 0.467939503 0.467939503 0.467939503 0.467939503 0.467939503 0.467939503 1.051725608 1.283461449 1.391331758 0.467939503 0.467939503 0.467939503 0.467939503 0.467939503 0.467939503 1-linoleoyl-GPC (18:2) 0.597745258 0.597745258 0.597745258 0.597745258 0.597745258 0.597745258 0.597745258 0.597745258 0.597745258 0.597745258 0.597745258 0.597745258 0.597745258 0.866639355 0.826792437 0.597745258 0.597745258 0.597745258 0.597745258 0.597745258 0.597745258 7.585890748 7.85878302 8.073315425 0.597745258 0.597745258 0.597745258 0.597745258 0.597745258 0.597745258 1-oleoyl-2-linoleoyl-GPC (18:1/18:2)* 0.00760325 0.00760325 0.00760325 0.00760325 0.00760325 0.00760325 0.00760325 0.00760325 0.00760325 0.480129422 0.49407518 0.448094244 0.954135762 1.064659268 0.997855479 0.009869153 0.00760325 0.00760325 0.00760325 0.00760325 0.00760325 1.197399586 1.101188284 1.157418708 0.00760325 0.00760325 0.00760325 0.00760325 0.00760325 0.00760325 1-oleoyl-GPC (18:1) 0.062105335 0.062105335 0.062105335 0.062105335 0.062105335 0.062105335 0.062105335 0.062105335 0.062105335 0.062105335 0.062105335 0.062105335 0.062105335 0.083654733 0.062105335 0.062105335 0.062105335 0.062105335 0.062105335 0.062105335 0.062105335 1.953492751 1.916345267 2.142622169 0.062105335 0.062105335 0.062105335 0.062105335 0.062105335 0.062105335 1-palmitoleoyl-GPC (16:1)* 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 1.114832796 1 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 0.788852324 1-palmitoyl-2-arachidonoyl-GPC (16:0/20:4n6) 0.535857258 0.535857258 0.535857258 0.535857258 0.535857258 0.535857258 0.535857258 0.535857258 0.535857258 0.535857258 0.665639577 0.568052876 1.160600113 1.198471752 1.088594454 0.535857258 0.535857258 0.535857258 0.535857258 0.535857258 0.535857258 1.047481928 0.911025017 1.012434892 0.535857258 0.535857258 0.535857258 0.535857258 0.535857258 0.535857258 1-palmitoyl-2-linoleoyl-GPC (16:0/18:2) 0.003507951 0.005060449 0.00517293 0.003507951 0.003507951 0.003507951 0.003507951 0.003507951 0.003507951 1 1.032996061 0.931881523 1.765828185 1.936945955 1.863876149 0.024020306 0.022564524 0.025921947 0.010491367 0.003956465 0.003507951 2.314781799 2.094766179 2.189280385 0.003507951 0.003507951 0.003507951 0.003507951 0.003507951 0.003507951 1-palmitoyl-2-oleoyl-GPC (16:0/18:1) 0.012211474 0.012211474 0.012211474 0.012211474 0.012211474 0.012211474 0.012211474 0.012211474 0.012211474 0.624454005 0.61847481 0.573395622 0.907097375 1.037656602 0.962343398 0.012211474 0.012211474 0.012211474 0.016030039 0.012211474 0.012211474 1.165277663 1.173173877 1.196941004 0.012211474 0.012211474 0.012211474 0.012211474 0.012211474 0.012211474 1-palmitoyl-2-palmitoleoyl-GPC (16:0/16:1)* 0.477154127 0.477154127 0.477154127 0.477154127 0.477154127 0.477154127 0.477154127 0.477154127 0.477154127 0.486319467 0.515472028 0.477154127 0.791350682 1.005204353 0.981127586 0.477154127 0.477154127 0.477154127 0.477154127 0.477154127 0.477154127 1.083032352 1.077081597 0.994795647 0.477154127 0.477154127 0.477154127 0.477154127 0.477154127 0.477154127 1-palmitoyl-2-palmitoleoyl-GPE (16:0/16:1)* 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 0.982040618 1-palmitoyl-GPC (16:0) 0.182751725 0.182751725 0.182751725 0.182751725 0.182751725 0.182751725 0.182751725 0.182751725 0.182751725 0.182751725 0.182751725 0.182751725 1.263828669 1.360774931 1.542668135 0.182751725 0.182751725 0.182751725 0.182751725 0.294778665 0.203266371 42.15874643 41.11314834 44.83330394 0.182751725 0.182751725 0.182751725 0.182751725 0.182751725 0.182751725 1-palmityl-GPC (O-16:0) 0.536766515 0.536766515 0.536766515 0.536766515 0.536766515 0.536766515 0.536766515 0.536766515 0.536766515 0.536766515 0.632170038 0.700324326 0.916375794 1 1.103392175 0.536766515 0.536766515 0.536766515 0.536766515 0.536766515 0.536766515 1.289894109 1.21943246 1.336035458 0.536766515 0.536766515 0.536766515 0.536766515 0.536766515 0.536766515 1-stearoyl-2-arachidonoyl-GPC (18:0/20:4) 0.481954393 0.481954393 0.481954393 0.481954393 0.481954393 0.481954393 0.481954393 0.481954393 0.481954393 0.510681026 0.54921855 0.481954393 1.043495113 1.112137881 1.101121264 0.481954393 0.481954393 0.481954393 0.481954393 0.481954393 0.481954393 1.090656761 0.916081812 0.987680897 0.481954393 0.481954393 0.481954393 0.481954393 0.481954393 0.481954393 1-stearoyl-2-docosapentaenoyl-GPC (18:0/22:5n3)* 0.550411815 0.550411815 0.550411815 0.550411815 0.550411815 0.550411815 0.550411815 0.550411815 0.550411815 0.550411815 0.550411815 0.550411815 0.954970179 0.963483385 1.195583641 0.550411815 0.550411815 0.550411815 0.550411815 0.550411815 0.550411815 1.437524851 1.118517467 1.181731042 0.550411815 0.550411815 0.550411815 0.550411815 0.550411815 0.550411815 1-stearoyl-2-oleoyl-GPC (18:0/18:1) 0.008723568 0.008723568 0.008723568 0.008723568 0.008723568 0.008723568 0.008723568 0.008723568 0.008723568 0.631665158 0.622535965 0.603210835 0.906384419 1.00431746 0.949901734 0.008723568 0.008723568 0.008723568 0.008723568 0.008723568 0.008723568 1.190862976 1.078737034 1.19149242 0.008723568 0.008723568 0.008723568 0.008723568 0.008723568 0.008723568 1-stearoyl-GPC (18:0) 0.073685032 0.073685032 0.073685032 0.073685032 0.073685032 0.073685032 0.073685032 0.073685032 0.073685032 0.073685032 0.119076368 0.073685032 1 1.086734094 1.295265843 0.073685032 0.073685032 0.073685032 0.073685032 0.073685032 0.073685032 24.99578636 25.14205864 27.23780791 0.073685032 0.073685032 0.073685032 0.073685032 0.073685032 0.073685032 1-stearoyl-GPE (18:0) 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 1 1.184713141 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 0.915310849 "1,2-dipalmitoyl-GPC (16:0/16:0)" 0.600907883 0.600907883 0.600907883 0.600907883 0.600907883 0.600907883 0.600907883 0.600907883 0.600907883 0.634647102 0.600907883 0.612792407 0.784836934 1.011233745 0.828670402 0.600907883 0.600907883 0.600907883 0.600907883 0.600907883 0.600907883 1.173434712 1.172706278 1.171864739 0.600907883 0.600907883 0.600907883 0.600907883 0.600907883 0.600907883 "1,2-dipalmitoyl-GPE (16:0/16:0)*" 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 0.913674298 behenoyl sphingomyelin (d18:1/22:0)* 0.736017704 0.736017704 0.736017704 0.736017704 0.736017704 0.736017704 0.736017704 0.736017704 0.736017704 0.757720614 0.82402746 0.736017704 1.249382627 1.252405168 1.204681652 0.736017704 0.736017704 0.736017704 0.736017704 0.736017704 0.736017704 0.99992983 1.162112075 1.080457077 0.736017704 0.736017704 0.736017704 0.736017704 0.736017704 0.736017704 cholesterol 0.498678994 0.498678994 0.498678994 0.498678994 0.498678994 0.498678994 0.498678994 0.498678994 0.498678994 0.683806171 0.498678994 0.498678994 1.068182941 1.170677838 0.498678994 0.498678994 0.498678994 0.498678994 0.498678994 0.498678994 0.498678994 1 1.410874829 1.414356964 0.498678994 0.498678994 0.498678994 0.498678994 0.498678994 0.498678994 palmitoyl dihydrosphingomyelin (d18:0/16:0)* 0.637807356 0.637807356 0.637807356 0.637807356 0.637807356 0.637807356 0.637807356 0.637807356 0.637807356 0.710938652 0.637807356 0.658903008 1.021495411 1.309533912 1.065127186 0.637807356 0.637807356 0.637807356 0.637807356 0.637807356 0.637807356 1.144949416 1.169660763 1.051626951 0.637807356 0.637807356 0.637807356 0.637807356 0.637807356 0.637807356 palmitoyl sphingomyelin (d18:1/16:0) 0.011400655 0.011400655 0.011400655 0.011400655 0.011400655 0.011400655 0.011400655 0.011400655 0.011400655 0.645162338 0.65744948 0.603123446 1 1.151185165 1.091804148 0.011400655 0.011400655 0.011400655 0.011400655 0.011400655 0.011400655 1.209209531 1.070077072 1.133346452 0.011400655 0.011400655 0.011400655 0.011400655 0.011400655 0.011400655 spermine 0.266023197 0.266023197 0.266023197 0.266023197 0.266023197 0.266023197 0.541690083 0.533141128 0.540502032 24.12954912 19.9906683 27.03908243 29.0916241 30.43668195 30.93808832 3.322051721 2.698925113 3.31825915 0.266023197 0.266023197 0.266023197 18.25186686 18.4459858 19.05579454 0.937496387 0.759156386 0.934575703 1.335077108 1.246655733 1.062503613 "sphingomyelin (d17:1/16:0, d18:1/15:0, d16:1/17:0)*" 0.591313849 0.591313849 0.591313849 0.591313849 0.591313849 0.591313849 0.591313849 0.591313849 0.591313849 0.667072481 0.591313849 0.635474097 0.970544704 1.093287532 1.029455296 0.591313849 0.591313849 0.591313849 0.591313849 0.591313849 0.591313849 1.134829712 1.129489825 1.172187846 0.591313849 0.591313849 0.591313849 0.591313849 0.591313849 0.591313849 "sphingomyelin (d18:1/14:0, d16:1/16:0)*" 0.395402691 0.395402691 0.395402691 0.395402691 0.395402691 0.395402691 0.395402691 0.395402691 0.395402691 0.754208678 0.50703324 0.395402691 0.908218543 0.976292047 1.028203016 0.395402691 0.395402691 0.395402691 0.395402691 0.395402691 0.395402691 1.316954945 1.023938955 1.262431007 0.395402691 0.395402691 0.395402691 0.395402691 0.395402691 0.395402691 "sphingomyelin (d18:1/17:0, d17:1/18:0, d19:1/16:0)" 0.393542028 0.393542028 0.393542028 0.393542028 0.393542028 0.393542028 0.393542028 0.393542028 0.393542028 0.617921476 0.393542028 0.540633825 1.086944376 1.120114647 1.123450057 0.393542028 0.393542028 0.393542028 0.393542028 0.393542028 0.393542028 1.267378172 1.044104077 1.11547555 0.393542028 0.393542028 0.393542028 0.393542028 0.393542028 0.393542028 "sphingomyelin (d18:1/20:0, d16:1/22:0)*" 0.652024389 0.652024389 0.652024389 0.652024389 0.652024389 0.652024389 0.652024389 0.652024389 0.652024389 0.682043845 0.724034548 0.652024389 1.084982112 1.203951857 1.031422734 0.652024389 0.652024389 0.652024389 0.652024389 0.652024389 0.652024389 1.042177101 1.090260226 1.023530473 0.652024389 0.652024389 0.652024389 0.652024389 0.652024389 0.652024389 "sphingomyelin (d18:1/21:0, d17:1/22:0, d16:1/23:0)*" 0.416653044 0.416653044 0.416653044 0.416653044 0.416653044 0.416653044 0.416653044 0.416653044 0.416653044 0.416653044 0.578084705 0.573947081 1.049170019 1.096615134 1.018788137 0.416653044 0.416653044 0.416653044 0.416653044 0.416653044 0.416653044 1.160451744 0.944008976 1.091109021 0.416653044 0.416653044 0.416653044 0.416653044 0.416653044 0.416653044 "sphingomyelin (d18:1/22:1, d18:2/22:0, d16:1/24:1)*" 0.626899622 0.626899622 0.626899622 0.626899622 0.626899622 0.626899622 0.626899622 0.626899622 0.626899622 0.709805924 0.637236445 0.626899622 1.227432977 1.284857138 1.193790454 0.626899622 0.626899622 0.626899622 0.626899622 0.626899622 0.626899622 1.182605073 1.179248103 0.998066609 0.626899622 0.626899622 0.626899622 0.626899622 0.626899622 0.626899622 "sphingomyelin (d18:1/24:1, d18:2/24:0)*" 0.707573645 0.707573645 0.707573645 0.707573645 0.707573645 0.707573645 0.707573645 0.707573645 0.707573645 0.707573645 0.79345758 0.710450225 1.155510966 1.127732625 1.14146722 0.707573645 0.707573645 0.707573645 0.707573645 0.707573645 0.707573645 1.116048879 0.958173108 1.09106813 0.707573645 0.707573645 0.707573645 0.707573645 0.707573645 0.707573645 "sphingomyelin (d18:2/23:0, d18:1/23:1, d17:1/24:1)*" 0.587422911 0.587422911 0.587422911 0.587422911 0.587422911 0.587422911 0.587422911 0.587422911 0.587422911 0.699678187 0.668019176 0.733497423 1.194003601 1.258529644 0.587422911 0.587422911 0.587422911 0.587422911 0.587422911 0.587422911 0.587422911 1.052322374 1.07589831 1.058637833 0.587422911 0.587422911 0.587422911 0.587422911 0.587422911 0.587422911 stearoyl sphingomyelin (d18:1/18:0) 0.582483184 0.582483184 0.582483184 0.582483184 0.582483184 0.582483184 0.582483184 0.582483184 0.582483184 0.632878362 0.635905009 0.582483184 1.023143184 1.142912407 1.018020137 0.582483184 0.582483184 0.582483184 0.582483184 0.582483184 0.582483184 1.048879907 1.020975938 1.041392413 0.582483184 0.582483184 0.582483184 0.582483184 0.582483184 0.582483184 taurolithocholate 1.390699964 1.26375249 1.214432582 1.053234405 1.182169027 1.364627847 0.462076294 0.462076294 0.462076294 0.792108447 1.051596848 0.81794137 0.960390438 1.039609562 0.916562786 0.462076294 0.462076294 0.462076294 2.123902354 2.522003524 2.074830839 0.88776754 0.603862979 0.723331049 0.462076294 0.501092471 0.779532376 0.686762007 0.712171741 0.727838931 tricosanoyl sphingomyelin (d18:1/23:0)* 0.441261025 0.441261025 0.441261025 0.441261025 0.441261025 0.441261025 0.441261025 0.441261025 0.441261025 0.441261025 0.672165961 0.658541182 1.2036737 0.987507711 1.119690581 0.441261025 0.441261025 0.441261025 0.441261025 0.441261025 0.441261025 1.084622653 1.119818837 1.143471998 0.441261025 0.441261025 0.441261025 0.441261025 0.441261025 0.441261025 oleoyl-linoleoyl-glycerol (18:1/18:2) [2] 0.909469133 0.909469133 0.909469133 1.033760867 0.909469133 1 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 0.909469133 MS_METABOLITE_DATA_END #METABOLITES METABOLITES_START Metabolite_name L_cris_S L_cris_S.1 L_cris_S.2 L_cris_B L_cris_B.1 L_cris_B.2 L_iners_S L_iners_S.1 L_iners_S.2 G_vag_S G_vag_S.1 G_vag_S.2 G_vag_B1 G_vag_B1.1 G_vag_B1.2 G_vag_B2 G_vag_B2.1 G_vag_B2.2 BL_MRS BL_MRS.1 BL_MRS.2 BL_NYC BL_NYC.1 BL_NYC.2 BL_BHI BL_BHI.1 BL_BHI.2 Bl_sBHI Bl_sBHI.1 Bl_sBHI.2 Metabolite_name Comp ID KEGG HMDB PUBCHEM 1-(1-enyl-palmitoyl)-2-linoleoyl-GPC (P-16:0/18:2)* 52682 HMDB0011211 24779386 1-(1-enyl-palmitoyl)-2-linoleoyl-GPE (P-16:0/18:2)* 52677 HMDB0011343 52925127 1-(1-enyl-palmitoyl)-GPC (P-16:0)* 52474 HMDB0010407 10917802 1-(1-enyl-stearoyl)-2-linoleoyl-GPE (P-18:0/18:2)* 52748 HMDB0011376 1-linoleoyl-GPC (18:2) 34419 C04100 HMDB0010386 11988421 1-oleoyl-2-linoleoyl-GPC (18:1/18:2)* 52453 HMDB0008105 24778939 1-oleoyl-GPC (18:1) 48258 C03916 HMDB0002815 16081932 1-palmitoleoyl-GPC (16:1)* 33230 HMDB0010383 24779461 1-palmitoyl-2-arachidonoyl-GPC (16:0/20:4n6) 52462 C05208 HMDB0007982 10747814 1-palmitoyl-2-linoleoyl-GPC (16:0/18:2) 42446 HMDB0007973 5287971 1-palmitoyl-2-oleoyl-GPC (16:0/18:1) 52461 C13875 HMDB0007972 6436017 1-palmitoyl-2-palmitoleoyl-GPC (16:0/16:1)* 52470 HMDB0007969 6443788 1-palmitoyl-2-palmitoleoyl-GPE (16:0/16:1)* 52471 HMDB0008924 52924925 1-palmitoyl-GPC (16:0) 33955 C04102 HMDB0010382 86554 1-palmityl-GPC (O-16:0) 20458 3983 1-stearoyl-2-arachidonoyl-GPC (18:0/20:4) 42450 HMDB0008048 16219824 1-stearoyl-2-docosapentaenoyl-GPC (18:0/22:5n3)* 52699 HMDB0008056 24778873 1-stearoyl-2-oleoyl-GPC (18:0/18:1) 52438 HMDB0008038 24778825 1-stearoyl-GPC (18:0) 33961 HMDB0010384 497300 1-stearoyl-GPE (18:0) 42398 HMDB0011130 9547068 1,2-dipalmitoyl-GPC (16:0/16:0) 19130 D03585 HMDB0000564 452110 1,2-dipalmitoyl-GPE (16:0/16:0)* 57341 HMDB0008923 445468 behenoyl sphingomyelin (d18:1/22:0)* 48492 HMDB0012103 44260125 cholesterol 63 C00187 HMDB0000067 6432564;11025495;5997 palmitoyl dihydrosphingomyelin (d18:0/16:0)* 52434 HMDB0010168 9939965 palmitoyl sphingomyelin (d18:1/16:0) 37506 HMDB0010169 9939941 spermine 603 C00750 HMDB0001256 1103 sphingomyelin (d17:1/16:0, d18:1/15:0, d16:1/17:0)* 52433 HMDB0240608   HMDB0240617 sphingomyelin (d18:1/14:0, d16:1/16:0)* 42463 HMDB0012097 11433862 sphingomyelin (d18:1/17:0, d17:1/18:0, d19:1/16:0) 52615 HMDB0240609   HMDB0240622   HMDB0240620 46891763 sphingomyelin (d18:1/20:0, d16:1/22:0)* 48490 HMDB0012102 44260124 sphingomyelin (d18:1/21:0, d17:1/22:0, d16:1/23:0)* 52495 HMDB0240621   HMDB0240611   HMDB0240619 sphingomyelin (d18:1/22:1, d18:2/22:0, d16:1/24:1)* 48493 HMDB0012104 sphingomyelin (d18:1/24:1, d18:2/24:0)* 47153 HMDB0012107 44260126 sphingomyelin (d18:2/23:0, d18:1/23:1, d17:1/24:1)* 52435 HMDB0240634   HMDB0011696   HMDB0240614 134757653 stearoyl sphingomyelin (d18:1/18:0) 19503 C00550 HMDB0001348 6453725 taurolithocholate 31889 C02592 HMDB0000722 439763 tricosanoyl sphingomyelin (d18:1/23:0)* 52436 HMDB0012105 oleoyl-linoleoyl-glycerol (18:1/18:2) [2] 46799 HMDB0007219 71433693 METABOLITES_END #END