#METABOLOMICS WORKBENCH Daikin_20231210_171337 DATATRACK_ID:4497 STUDY_ID:ST003001 ANALYSIS_ID:AN004929 VERSION 1 CREATED_ON 12-12-2023 #PROJECT PR:PROJECT_TITLE The Track Dairy Cattle (trackDC) study PR:PROJECT_SUMMARY The Track Dairy Cattle (trackDC) study is a longitudinal study in northern China PR:PROJECT_SUMMARY that aims to track newborn calves to assess the development of gut microbiota PR:PROJECT_SUMMARY during early life that contributes to cattle health and production. In this PR:PROJECT_SUMMARY study, 36 newborn calves were randomly assigned to three groups and followed for PR:PROJECT_SUMMARY two months after birth. The groups included a control group (CON), a rumen PR:PROJECT_SUMMARY microbiota transplantation group (RMT), and a rumen fluid transplantation group PR:PROJECT_SUMMARY (RFT) and intensive data has been collected. Blood samples were collected at 15, PR:PROJECT_SUMMARY 35, and 56 days after birth. PR:INSTITUTE Nanjing Medical University PR:LAST_NAME Dong PR:FIRST_NAME Quanbin PR:ADDRESS No. 215 Guangzhou road PR:EMAIL qbdong@stu.njmu.edu.cn PR:PHONE 15311095435 PR:DOI http://dx.doi.org/10.21228/M8VX4G #STUDY ST:STUDY_TITLE The Track Dairy Cattle (trackDC) study ST:STUDY_SUMMARY The Track Dairy Cattle (trackDC) study is a longitudinal study in northern China ST:STUDY_SUMMARY that aims to track newborn calves to assess the development of gut microbiota ST:STUDY_SUMMARY during early life that contributes to cattle health and production. In this ST:STUDY_SUMMARY study, 36 newborn calves were randomly assigned to three groups and followed for ST:STUDY_SUMMARY two months after birth. The groups included a control group (CON), a rumen ST:STUDY_SUMMARY microbiota transplantation group (RMT), and a rumen fluid transplantation group ST:STUDY_SUMMARY (RFT) and intensive data has been collected. Blood samples were collected at 15, ST:STUDY_SUMMARY 35, and 56 days after birth. ST:INSTITUTE Nanjing Medical University ST:LAST_NAME Dong ST:FIRST_NAME Quanbin ST:ADDRESS No. 215 Guangzhou road ST:EMAIL qbdong@stu.njmu.edu.cn ST:PHONE 15311095435 ST:SUBMIT_DATE 2023-12-10 #SUBJECT SU:SUBJECT_TYPE Mammal SU:SUBJECT_SPECIES Bos taurus SU:TAXONOMY_ID 9913 #SUBJECT_SAMPLE_FACTORS: SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Additional sample data SUBJECT_SAMPLE_FACTORS - F62_0 Transplantation group:CON | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F62_0.raw SUBJECT_SAMPLE_FACTORS - F63_0 Transplantation group:CON | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F63_0.raw SUBJECT_SAMPLE_FACTORS - F64_0 Transplantation group:CON | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F64_0.raw SUBJECT_SAMPLE_FACTORS - F65_0 Transplantation group:CON | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F65_0.raw SUBJECT_SAMPLE_FACTORS - F84_0 Transplantation group:CON | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F84_0.raw SUBJECT_SAMPLE_FACTORS - F86_0 Transplantation group:CON | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F86_0.raw SUBJECT_SAMPLE_FACTORS - F87_0 Transplantation group:CON | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F87_0.raw SUBJECT_SAMPLE_FACTORS - F88_0 Transplantation group:CON | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F88_0.raw SUBJECT_SAMPLE_FACTORS - F89_0 Transplantation group:CON | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F89_0.raw SUBJECT_SAMPLE_FACTORS - F90_0 Transplantation group:CON | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F90_0.raw SUBJECT_SAMPLE_FACTORS - F91_0 Transplantation group:CON | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F91_0.raw SUBJECT_SAMPLE_FACTORS - F92_0 Transplantation group:CON | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F92_0.raw SUBJECT_SAMPLE_FACTORS - F62_15 Transplantation group:CON | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F62_15.raw SUBJECT_SAMPLE_FACTORS - F63_15 Transplantation group:CON | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F63_15.raw SUBJECT_SAMPLE_FACTORS - F64_15 Transplantation group:CON | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F64_15.raw SUBJECT_SAMPLE_FACTORS - F65_15 Transplantation group:CON | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F65_15.raw SUBJECT_SAMPLE_FACTORS - F84_15 Transplantation group:CON | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F84_15.raw SUBJECT_SAMPLE_FACTORS - F86_15 Transplantation group:CON | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F86_15.raw SUBJECT_SAMPLE_FACTORS - F87_15 Transplantation group:CON | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F87_15.raw SUBJECT_SAMPLE_FACTORS - F88_15 Transplantation group:CON | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F88_15.raw SUBJECT_SAMPLE_FACTORS - F89_15 Transplantation group:CON | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F89_15.raw SUBJECT_SAMPLE_FACTORS - F90_15 Transplantation group:CON | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F90_15.raw SUBJECT_SAMPLE_FACTORS - F91_15 Transplantation group:CON | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F91_15.raw SUBJECT_SAMPLE_FACTORS - F92_15 Transplantation group:CON | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F92_15.raw SUBJECT_SAMPLE_FACTORS - F62_35 Transplantation group:CON | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F62_35.raw SUBJECT_SAMPLE_FACTORS - F63_35 Transplantation group:CON | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F63_35.raw SUBJECT_SAMPLE_FACTORS - F64_35 Transplantation group:CON | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F64_35.raw SUBJECT_SAMPLE_FACTORS - F65_35 Transplantation group:CON | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F65_35.raw SUBJECT_SAMPLE_FACTORS - F84_35 Transplantation group:CON | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F84_35.raw SUBJECT_SAMPLE_FACTORS - F86_35 Transplantation group:CON | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F86_35.raw SUBJECT_SAMPLE_FACTORS - F87_35 Transplantation group:CON | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F87_35.raw SUBJECT_SAMPLE_FACTORS - F88_35 Transplantation group:CON | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F88_35.raw SUBJECT_SAMPLE_FACTORS - F89_35 Transplantation group:CON | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F89_35.raw SUBJECT_SAMPLE_FACTORS - F90_35 Transplantation group:CON | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F90_35.raw SUBJECT_SAMPLE_FACTORS - F91_35 Transplantation group:CON | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F91_35.raw SUBJECT_SAMPLE_FACTORS - F92_35 Transplantation group:CON | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F92_35.raw SUBJECT_SAMPLE_FACTORS - F62_56 Transplantation group:CON | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F62_56.raw SUBJECT_SAMPLE_FACTORS - F63_56 Transplantation group:CON | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F63_56.raw SUBJECT_SAMPLE_FACTORS - F64_56 Transplantation group:CON | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F64_56.raw SUBJECT_SAMPLE_FACTORS - F65_56 Transplantation group:CON | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F65_56.raw SUBJECT_SAMPLE_FACTORS - F84_56 Transplantation group:CON | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F84_56.raw SUBJECT_SAMPLE_FACTORS - F86_56 Transplantation group:CON | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F86_56.raw SUBJECT_SAMPLE_FACTORS - F87_56 Transplantation group:CON | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F87_56.raw SUBJECT_SAMPLE_FACTORS - F88_56 Transplantation group:CON | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F88_56.raw SUBJECT_SAMPLE_FACTORS - F89_56 Transplantation group:CON | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F89_56.raw SUBJECT_SAMPLE_FACTORS - F90_56 Transplantation group:CON | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F90_56.raw SUBJECT_SAMPLE_FACTORS - F91_56 Transplantation group:CON | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F91_56.raw SUBJECT_SAMPLE_FACTORS - F92_56 Transplantation group:CON | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F92_56.raw SUBJECT_SAMPLE_FACTORS - F66_0 Transplantation group:RFT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F66_0.raw SUBJECT_SAMPLE_FACTORS - F67_0 Transplantation group:RFT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F67_0.raw SUBJECT_SAMPLE_FACTORS - F68_0 Transplantation group:RFT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F68_0.raw SUBJECT_SAMPLE_FACTORS - F69_0 Transplantation group:RFT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F69_0.raw SUBJECT_SAMPLE_FACTORS - F70_0 Transplantation group:RFT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F70_0.raw SUBJECT_SAMPLE_FACTORS - F73_0 Transplantation group:RFT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F73_0.raw SUBJECT_SAMPLE_FACTORS - F75_0 Transplantation group:RFT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F75_0.raw SUBJECT_SAMPLE_FACTORS - F76_0 Transplantation group:RFT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F76_0.raw SUBJECT_SAMPLE_FACTORS - F77_0 Transplantation group:RFT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F77_0.raw SUBJECT_SAMPLE_FACTORS - F79_0 Transplantation group:RFT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F79_0.raw SUBJECT_SAMPLE_FACTORS - F80_0 Transplantation group:RFT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F80_0.raw SUBJECT_SAMPLE_FACTORS - F83_0 Transplantation group:RFT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F83_0.raw SUBJECT_SAMPLE_FACTORS - F66_15 Transplantation group:RFT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F66_15.raw SUBJECT_SAMPLE_FACTORS - F67_15 Transplantation group:RFT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F67_15.raw SUBJECT_SAMPLE_FACTORS - F68_15 Transplantation group:RFT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F68_15.raw SUBJECT_SAMPLE_FACTORS - F69_15 Transplantation group:RFT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F69_15.raw SUBJECT_SAMPLE_FACTORS - F70_15 Transplantation group:RFT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F70_15.raw SUBJECT_SAMPLE_FACTORS - F73_15 Transplantation group:RFT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F73_15.raw SUBJECT_SAMPLE_FACTORS - F75_15 Transplantation group:RFT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F75_15.raw SUBJECT_SAMPLE_FACTORS - F76_15 Transplantation group:RFT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F76_15.raw SUBJECT_SAMPLE_FACTORS - F77_15 Transplantation group:RFT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F77_15.raw SUBJECT_SAMPLE_FACTORS - F79_15 Transplantation group:RFT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F79_15.raw SUBJECT_SAMPLE_FACTORS - F80_15 Transplantation group:RFT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F80_15.raw SUBJECT_SAMPLE_FACTORS - F83_15 Transplantation group:RFT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F83_15.raw SUBJECT_SAMPLE_FACTORS - F66_35 Transplantation group:RFT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F66_35.raw SUBJECT_SAMPLE_FACTORS - F67_35 Transplantation group:RFT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F67_35.raw SUBJECT_SAMPLE_FACTORS - F68_35 Transplantation group:RFT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F68_35.raw SUBJECT_SAMPLE_FACTORS - F69_35 Transplantation group:RFT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F69_35.raw SUBJECT_SAMPLE_FACTORS - F70_35 Transplantation group:RFT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F70_35.raw SUBJECT_SAMPLE_FACTORS - F73_35 Transplantation group:RFT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F73_35.raw SUBJECT_SAMPLE_FACTORS - F75_35 Transplantation group:RFT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F75_35.raw SUBJECT_SAMPLE_FACTORS - F76_35 Transplantation group:RFT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F76_35.raw SUBJECT_SAMPLE_FACTORS - F77_35 Transplantation group:RFT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F77_35.raw SUBJECT_SAMPLE_FACTORS - F79_35 Transplantation group:RFT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F79_35.raw SUBJECT_SAMPLE_FACTORS - F80_35 Transplantation group:RFT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F80_35.raw SUBJECT_SAMPLE_FACTORS - F83_35 Transplantation group:RFT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F83_35.raw SUBJECT_SAMPLE_FACTORS - F66_56 Transplantation group:RFT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F66_56.raw SUBJECT_SAMPLE_FACTORS - F67_56 Transplantation group:RFT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F67_56.raw SUBJECT_SAMPLE_FACTORS - F68_56 Transplantation group:RFT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F68_56.raw SUBJECT_SAMPLE_FACTORS - F69_56 Transplantation group:RFT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F69_56.raw SUBJECT_SAMPLE_FACTORS - F70_56 Transplantation group:RFT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F70_56.raw SUBJECT_SAMPLE_FACTORS - F73_56 Transplantation group:RFT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F73_56.raw SUBJECT_SAMPLE_FACTORS - F75_56 Transplantation group:RFT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F75_56.raw SUBJECT_SAMPLE_FACTORS - F76_56 Transplantation group:RFT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F76_56.raw SUBJECT_SAMPLE_FACTORS - F77_56 Transplantation group:RFT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F77_56.raw SUBJECT_SAMPLE_FACTORS - F79_56 Transplantation group:RFT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F79_56.raw SUBJECT_SAMPLE_FACTORS - F80_56 Transplantation group:RFT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F80_56.raw SUBJECT_SAMPLE_FACTORS - F83_56 Transplantation group:RFT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F83_56.raw SUBJECT_SAMPLE_FACTORS - F39_0 Transplantation group:RMT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F39_0.raw SUBJECT_SAMPLE_FACTORS - F41_0 Transplantation group:RMT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F41_0.raw SUBJECT_SAMPLE_FACTORS - F47_0 Transplantation group:RMT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F47_0.raw SUBJECT_SAMPLE_FACTORS - F48_0 Transplantation group:RMT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F48_0.raw SUBJECT_SAMPLE_FACTORS - F49_0 Transplantation group:RMT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F49_0.raw SUBJECT_SAMPLE_FACTORS - F52_0 Transplantation group:RMT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F52_0.raw SUBJECT_SAMPLE_FACTORS - F53_0 Transplantation group:RMT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F53_0.raw SUBJECT_SAMPLE_FACTORS - F55_0 Transplantation group:RMT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F55_0.raw SUBJECT_SAMPLE_FACTORS - F56_0 Transplantation group:RMT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F56_0.raw SUBJECT_SAMPLE_FACTORS - F58_0 Transplantation group:RMT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F58_0.raw SUBJECT_SAMPLE_FACTORS - F61_0 Transplantation group:RMT | collection_timepoint:0 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F61_0.raw SUBJECT_SAMPLE_FACTORS - F39_15 Transplantation group:RMT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F39_15.raw SUBJECT_SAMPLE_FACTORS - F41_15 Transplantation group:RMT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F41_15.raw SUBJECT_SAMPLE_FACTORS - F47_15 Transplantation group:RMT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F47_15.raw SUBJECT_SAMPLE_FACTORS - F48_15 Transplantation group:RMT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F48_15.raw SUBJECT_SAMPLE_FACTORS - F49_15 Transplantation group:RMT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F49_15.raw SUBJECT_SAMPLE_FACTORS - F52_15 Transplantation group:RMT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F52_15.raw SUBJECT_SAMPLE_FACTORS - F53_15 Transplantation group:RMT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F53_15.raw SUBJECT_SAMPLE_FACTORS - F55_15 Transplantation group:RMT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F55_15.raw SUBJECT_SAMPLE_FACTORS - F56_15 Transplantation group:RMT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F56_15.raw SUBJECT_SAMPLE_FACTORS - F58_15 Transplantation group:RMT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F58_15.raw SUBJECT_SAMPLE_FACTORS - F61_15 Transplantation group:RMT | collection_timepoint:15 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F61_15.raw SUBJECT_SAMPLE_FACTORS - F39_35 Transplantation group:RMT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F39_35.raw SUBJECT_SAMPLE_FACTORS - F41_35 Transplantation group:RMT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F41_35.raw SUBJECT_SAMPLE_FACTORS - F47_35 Transplantation group:RMT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F47_35.raw SUBJECT_SAMPLE_FACTORS - F48_35 Transplantation group:RMT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F48_35.raw SUBJECT_SAMPLE_FACTORS - F49_35 Transplantation group:RMT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F49_35.raw SUBJECT_SAMPLE_FACTORS - F52_35 Transplantation group:RMT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F52_35.raw SUBJECT_SAMPLE_FACTORS - F53_35 Transplantation group:RMT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F53_35.raw SUBJECT_SAMPLE_FACTORS - F55_35 Transplantation group:RMT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F55_35.raw SUBJECT_SAMPLE_FACTORS - F56_35 Transplantation group:RMT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F56_35.raw SUBJECT_SAMPLE_FACTORS - F58_35 Transplantation group:RMT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F58_35.raw SUBJECT_SAMPLE_FACTORS - F61_35 Transplantation group:RMT | collection_timepoint:35 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F61_35.raw SUBJECT_SAMPLE_FACTORS - F39_56 Transplantation group:RMT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F39_56.raw SUBJECT_SAMPLE_FACTORS - F41_56 Transplantation group:RMT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F41_56.raw SUBJECT_SAMPLE_FACTORS - F47_56 Transplantation group:RMT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F47_56.raw SUBJECT_SAMPLE_FACTORS - F48_56 Transplantation group:RMT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F48_56.raw SUBJECT_SAMPLE_FACTORS - F49_56 Transplantation group:RMT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F49_56.raw SUBJECT_SAMPLE_FACTORS - F52_56 Transplantation group:RMT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F52_56.raw SUBJECT_SAMPLE_FACTORS - F53_56 Transplantation group:RMT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F53_56.raw SUBJECT_SAMPLE_FACTORS - F55_56 Transplantation group:RMT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F55_56.raw SUBJECT_SAMPLE_FACTORS - F56_56 Transplantation group:RMT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F56_56.raw SUBJECT_SAMPLE_FACTORS - F58_56 Transplantation group:RMT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F58_56.raw SUBJECT_SAMPLE_FACTORS - F61_56 Transplantation group:RMT | collection_timepoint:56 organism_part=blood plasma; Unit=day; RAW_FILE_NAME=F61_56.raw #COLLECTION CO:COLLECTION_SUMMARY In this study, 36 newborn calves were randomly assigned to three groups and CO:COLLECTION_SUMMARY followed for two months after birth. The groups included a control group (CON), CO:COLLECTION_SUMMARY a rumen microbiota transplantation group (RMT), and a rumen fluid CO:COLLECTION_SUMMARY transplantation group (RFT) and intensive data has been collected. The newborn CO:COLLECTION_SUMMARY calves were trained to feed milk using a bucket and then transferred to CO:COLLECTION_SUMMARY individual calf hutches. Starter was provided ad libitum three days after birth CO:COLLECTION_SUMMARY and once daily in the morning thereafter. Pasteurized whole milk was fed twice CO:COLLECTION_SUMMARY daily at 0800 and 1800 h using a bucket, and the calves were weaned 56 days CO:COLLECTION_SUMMARY after birth. RMT and RFT were performed by veterinarians, where the ruminal CO:COLLECTION_SUMMARY fluid used in RMT and RFT was collected from a healthy cattle (4-year-old, CO:COLLECTION_SUMMARY 600kg, in the dry period,) with a permanent rumen cannula 2 hours after the CO:COLLECTION_SUMMARY morning feed. Fresh ruminal fluid was mixed with raw milk and fed to the calves CO:COLLECTION_SUMMARY in the RMT group immediately after collection. For the RFT group, the ruminal CO:COLLECTION_SUMMARY fluid was autoclaved before feeding. A volume of 50 mL, 80 mL, and 110 mL of CO:COLLECTION_SUMMARY ruminal fluid was fed from day 7 to day 11, day 21 to day 25, and day 42 to day CO:COLLECTION_SUMMARY 46, respectively. Fecal and blood samples were collected at 15, 35, and 56 days CO:COLLECTION_SUMMARY after birth. CO:COLLECTION_PROTOCOL_FILENAME collection_protocol.docx CO:SAMPLE_TYPE Blood (plasma) #TREATMENT TR:TREATMENT_SUMMARY The newborn calves were trained to feed milk using a bucket and then transferred TR:TREATMENT_SUMMARY to individual calf hutches. Starter was provided ad libitum three days after TR:TREATMENT_SUMMARY birth and once daily in the morning thereafter. Pasteurized whole milk was fed TR:TREATMENT_SUMMARY twice daily at 0800 and 1800 h using a bucket, and the calves were weaned 56 TR:TREATMENT_SUMMARY days after birth. RMT and RFT were performed by veterinarians, where the ruminal TR:TREATMENT_SUMMARY fluid used in RMT and RFT was collected from a healthy cattle (4-year-old, TR:TREATMENT_SUMMARY 600kg, in the dry period,) with a permanent rumen cannula 2 hours after the TR:TREATMENT_SUMMARY morning feed. Fresh ruminal fluid was mixed with raw milk and fed to the calves TR:TREATMENT_SUMMARY in the RMT group immediately after collection. For the RFT group, the ruminal TR:TREATMENT_SUMMARY fluid was autoclaved before feeding. A volume of 50 mL, 80 mL, and 110 mL of TR:TREATMENT_SUMMARY ruminal fluid was fed from day 7 to day 11, day 21 to day 25, and day 42 to day TR:TREATMENT_SUMMARY 46, respectively. Fecal and blood samples were collected at 15, 35, and 56 days TR:TREATMENT_SUMMARY after birth. TR:TREATMENT_PROTOCOL_FILENAME treatment_protocol.docx #SAMPLEPREP SP:SAMPLEPREP_SUMMARY - SP:SAMPLEPREP_PROTOCOL_FILENAME sampleprep_protocol.docx #CHROMATOGRAPHY CH:METHODS_FILENAME UHPLC-MSMS_Analysis.docx CH:INSTRUMENT_NAME Thermo Vanquish CH:COLUMN_NAME Thermo Hypersil GOLD aQ (100 x 2.1mm,1.9um) CH:COLUMN_TEMPERATURE 40℃ CH:FLOW_GRADIENT 2% B, 1.5 min; 2-85% B, 3 min; 100% B, 10 min；100-2% B, 10.1 min；2% B, 12 CH:FLOW_GRADIENT min CH:FLOW_RATE 0.2 mL/min CH:SOLVENT_A 100% water; 0.1% formic acid CH:SOLVENT_B 100% methanol CH:CHROMATOGRAPHY_TYPE Reversed phase #ANALYSIS AN:ANALYSIS_TYPE MS #MS MS:INSTRUMENT_NAME Thermo Q Exactive HF hybrid Orbitrap MS:INSTRUMENT_TYPE Orbitrap MS:MS_TYPE ESI MS:MS_COMMENTS Q ExactiveTM HF mass spectrometer was operated in positive/negative polarity MS:MS_COMMENTS mode with spray voltage of 3.2 kV, capillary temperature of 320°C, sheath gas MS:MS_COMMENTS flow rate of 40 arb and aux gas flow rate of 10 arb, Funnel RF level of 40, Aux MS:MS_COMMENTS gas heater temperature of 350°C. MS:ION_MODE UNSPECIFIED MS:MS_RESULTS_FILE ST003001_AN004929_Results.txt UNITS:s Has m/z:Yes Has RT:Yes RT units:Minutes #END