#METABOLOMICS WORKBENCH MGJaramillo_20240703_153211 DATATRACK_ID:4972 STUDY_ID:ST003296 ANALYSIS_ID:AN005399 PROJECT_ID:PR002046
VERSION             	1
CREATED_ON             	July 5, 2024, 9:54 am
#PROJECT
PR:PROJECT_TITLE                 	Exploring the Effects of Toxic Road Runoff Contaminants (6PPD-quinone,
PR:PROJECT_TITLE                 	9,10-anthraquinone) on Juvenile Salmonids with a Multi-OMICs Approach
PR:PROJECT_TYPE                  	Untargeted Metabolomics
PR:PROJECT_SUMMARY               	Pacific salmonid populations have been declining predominantly due to
PR:PROJECT_SUMMARY               	anthropogenic factors such as climate change, habitat loss, and water
PR:PROJECT_SUMMARY               	contaminants derived from urban storm water runoff. Growing urbanism has
PR:PROJECT_SUMMARY               	resulted in areas of impervious surfaces leading to increased storm water runoff
PR:PROJECT_SUMMARY               	entering urban rivers and streams. Storm water runoff has been correlated to
PR:PROJECT_SUMMARY               	escalating rates of pre-spawn mortality (PSM) events in coho salmon in Pacific
PR:PROJECT_SUMMARY               	Northwest streams. PSM events in salmonids are characterized by rapid onset
PR:PROJECT_SUMMARY               	symptoms including surface swimming, loss of equilibrium, and fin splaying that
PR:PROJECT_SUMMARY               	precede mass adult population mortality prior to egg fertilization. In 2020, a
PR:PROJECT_SUMMARY               	chemical derived from tires,
PR:PROJECT_SUMMARY               	N-(1,3-Dimethylbutyl)-N'-phenyl-p-phenylenediamine-quinone (6Q), was isolated
PR:PROJECT_SUMMARY               	from stormwater runoff and subsequent toxicity tests resulted in acute coho
PR:PROJECT_SUMMARY               	salmon mortality exhibiting a 24-hour dose at fifty percent population mortality
PR:PROJECT_SUMMARY               	(LC50) of 95 ng/L. 6Q is an oxidation product derived from N-
PR:PROJECT_SUMMARY               	(1,3-Dimethylbutyl)-N'-phenyl-p-phenylenediamine (6PPD), which is used by tire
PR:PROJECT_SUMMARY               	manufacturers as an antioxidant and antiozonant. The toxic mechanism of 6Q is
PR:PROJECT_SUMMARY               	not yet known, but it is suspected to induce an inhibitory effect on cytochrome
PR:PROJECT_SUMMARY               	P450 (CYP450) genes encoding for CYP450 enzymes, which are responsible for
PR:PROJECT_SUMMARY               	xenobiotic metabolism. We hypothesize 6Q exposure affects salmonids’ ability
PR:PROJECT_SUMMARY               	to synthesize essential structural and cell signaling molecules and inhibits
PR:PROJECT_SUMMARY               	their ability to metabolize other water contaminants such as polycyclic
PR:PROJECT_SUMMARY               	hydrocarbons (PAHs). PAHs are a chemical class of concern due to their potential
PR:PROJECT_SUMMARY               	carcinogenic, teratogenic, and mutagenic effects in aquatic organisms. Thus,
PR:PROJECT_SUMMARY               	this project will focus on the commonly detected water PAH contaminant
PR:PROJECT_SUMMARY               	anthraquinone and its impact on salmonids when co-exposed to 6Q. Further,
PR:PROJECT_SUMMARY               	climate change may be a contributing factor to salmonid susceptibility to water
PR:PROJECT_SUMMARY               	contaminants. Increasing global carbon dioxide emissions have affected aquatic
PR:PROJECT_SUMMARY               	species significantly due to the ability of rivers and streams to transport or
PR:PROJECT_SUMMARY               	store atmospheric carbon dioxide, resulting in rapidly rising water temperatures
PR:PROJECT_SUMMARY               	having potential to exacerbate salmonid sensitivity to water contaminant
PR:INSTITUTE                     	Oregon State University
PR:DEPARTMENT                    	Environmental and Molecular Toxicology
PR:LABORATORY                    	Water Quality Toxicology
PR:LAST_NAME                     	Garcia-Jaramillo
PR:FIRST_NAME                    	Manuel
PR:ADDRESS                       	1007 SW Campus Way, Corvallis, OR, 97331
PR:EMAIL                         	manuel.g.jaramillo@oregonstate.edu
PR:PHONE                         	541-737-5714
#STUDY
ST:STUDY_TITLE                   	Exploring the Effects of Toxic Road Runoff Contaminants (6PPD-quinone,
ST:STUDY_TITLE                   	9,10-anthraquinone) on Juvenile Salmonids with a Multi-OMICs Approach (Liver)
ST:STUDY_SUMMARY                 	Pacific salmonid populations have been declining predominantly due to
ST:STUDY_SUMMARY                 	anthropogenic factors such as climate change, habitat loss, and water
ST:STUDY_SUMMARY                 	contaminants derived from urban storm water runoff. Growing urbanism has
ST:STUDY_SUMMARY                 	resulted in areas of impervious surfaces leading to increased storm water runoff
ST:STUDY_SUMMARY                 	entering urban rivers and streams. Storm water runoff has been correlated to
ST:STUDY_SUMMARY                 	escalating rates of pre-spawn mortality (PSM) events in coho salmon in Pacific
ST:STUDY_SUMMARY                 	Northwest streams. PSM events in salmonids are characterized by rapid onset
ST:STUDY_SUMMARY                 	symptoms including surface swimming, loss of equilibrium, and fin splaying that
ST:STUDY_SUMMARY                 	precede mass adult population mortality prior to egg fertilization. In 2020, a
ST:STUDY_SUMMARY                 	chemical derived from tires,
ST:STUDY_SUMMARY                 	N-(1,3-Dimethylbutyl)-N'-phenyl-p-phenylenediamine-quinone (6Q), was isolated
ST:STUDY_SUMMARY                 	from storm water runoff and subsequent toxicity tests resulted in acute coho
ST:STUDY_SUMMARY                 	salmon mortality exhibiting a 24-hour dose at fifty percent population mortality
ST:STUDY_SUMMARY                 	(LC50) of 95 ng/L. 6Q is an oxidation product derived from
ST:STUDY_SUMMARY                 	N-(1,3-Dimethylbutyl)-N'-phenyl-p-phenylenediamine (6PPD), which is used by tire
ST:STUDY_SUMMARY                 	manufacturers as an antioxidant and antiozonant. The toxic mechanism of 6Q is
ST:STUDY_SUMMARY                 	not yet known, but it is suspected to induce an inhibitory effect on cytochrome
ST:STUDY_SUMMARY                 	P450 (CYP450) genes encoding for CYP450 enzymes, which are responsible for
ST:STUDY_SUMMARY                 	xenobiotic metabolism. We hypothesize 6Q exposure affects salmonids’ ability
ST:STUDY_SUMMARY                 	to synthesize essential structural and cell signaling molecules and inhibits
ST:STUDY_SUMMARY                 	their ability to metabolize other water contaminants such as polycyclic
ST:STUDY_SUMMARY                 	hydrocarbons (PAHs). PAHs are a chemical class of concern due to their potential
ST:STUDY_SUMMARY                 	carcinogenic, teratogenic, and mutagenic effects in aquatic organisms. Thus,
ST:STUDY_SUMMARY                 	this project will focus on the commonly detected water PAH contaminant
ST:STUDY_SUMMARY                 	anthraquinone and its impact on salmonids when co-exposed to 6Q. Further,
ST:STUDY_SUMMARY                 	climate change may be a contributing factor to salmonid susceptibility to water
ST:STUDY_SUMMARY                 	contaminants. Increasing global carbon dioxide emissions have affected aquatic
ST:STUDY_SUMMARY                 	species significantly due to the ability of rivers and streams to transport or
ST:STUDY_SUMMARY                 	store atmospheric carbon dioxide, resulting in rapidly rising water temperatures
ST:STUDY_SUMMARY                 	having potential to exacerbate salmonid sensitivity to water contaminant
ST:INSTITUTE                     	Oregon State University
ST:DEPARTMENT                    	Environmental and Molecular Toxicology
ST:LABORATORY                    	Water Quality Toxicology
ST:LAST_NAME                     	Garcia-Jaramillo
ST:FIRST_NAME                    	Manuel
ST:ADDRESS                       	1007 SW Campus Way, Corvallis, OR, 97331
ST:EMAIL                         	manuel.g.jaramillo@oregonstate.edu
ST:NUM_GROUPS                    	6
ST:TOTAL_SUBJECTS                	270
ST:NUM_MALES                     	NA
ST:NUM_FEMALES                   	NA
ST:STUDY_TYPE                    	Metabolomics
ST:PHONE                         	541-737-5714
#SUBJECT
SU:SUBJECT_TYPE                  	Fish
SU:SUBJECT_SPECIES               	Oncorhynchus tshawytscha, Oncorhynchus mykiss, Oncorhynchus kisutch
SU:TAXONOMY_ID                   	74940, 8022, 8019
SU:WEIGHT_OR_WEIGHT_RANGE        	3-5 g
SU:HEIGHT_OR_HEIGHT_RANGE        	NA
#FACTORS
#SUBJECT_SAMPLE_FACTORS:         	SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Raw file names and additional sample data
SUBJECT_SAMPLE_FACTORS           	*371	371_UC_L5_3_RT	Treatment:Unfed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L5; Experimental Replicate=3; RAW_FILE_NAME=371_UC_L5_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*308	308_UC_L5_3_CO	Treatment:Unfed Control | Sample source:Liver | Species:Coho	Tank Replicate=L5; Experimental Replicate=3; RAW_FILE_NAME=308_UC_L5_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*320	320_UC_L5_3_CH	Treatment:Unfed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L5; Experimental Replicate=3; RAW_FILE_NAME=320_UC_L5_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*315	315_UC_L5_2_CO	Treatment:Unfed Control | Sample source:Liver | Species:Coho	Tank Replicate=L5; Experimental Replicate=2; RAW_FILE_NAME=315_UC_L5_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*422	422_UC_L5_2_CH	Treatment:Unfed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L5; Experimental Replicate=2; RAW_FILE_NAME=422_UC_L5_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*449	449_UC_L5_1_CO	Treatment:Unfed Control | Sample source:Liver | Species:Coho	Tank Replicate=L5; Experimental Replicate=1; RAW_FILE_NAME=449_UC_L5_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*277	277_UC_L5_1_CH	Treatment:Unfed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L5; Experimental Replicate=1; RAW_FILE_NAME=277_UC_L5_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*342	342_IN_L5_3_CO	Treatment:Insult | Sample source:Liver | Species:Coho	Tank Replicate=L5; Experimental Replicate=3; RAW_FILE_NAME=342_IN_L5_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*441	441_IN_L5_2_CH	Treatment:Insult | Sample source:Liver | Species:Chinook	Tank Replicate=L5; Experimental Replicate=2; RAW_FILE_NAME=441_IN_L5_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*423	423_IN_L5_1_RT	Treatment:Insult | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L5; Experimental Replicate=1; RAW_FILE_NAME=423_IN_L5_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*305	305_FC_L5_3_CH	Treatment:Fed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L5; Experimental Replicate=3; RAW_FILE_NAME=305_FC_L5_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*288	288_FC_L5_2_RT	Treatment:Fed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L5; Experimental Replicate=2; RAW_FILE_NAME=288_FC_L5_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*321	321_FC_L5_1_RT	Treatment:Fed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L5; Experimental Replicate=1; RAW_FILE_NAME=321_FC_L5_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*415	415_FC_L5_1_CO	Treatment:Fed Control | Sample source:Liver | Species:Coho	Tank Replicate=L5; Experimental Replicate=1; RAW_FILE_NAME=415_FC_L5_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*323	323_FC_L5_1_CH	Treatment:Fed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L5; Experimental Replicate=1; RAW_FILE_NAME=323_FC_L5_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*331	331_CE_L5_3_RT	Treatment:Coexposure | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L5; Experimental Replicate=3; RAW_FILE_NAME=331_CE_L5_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*352	352_CE_L5_3_CH	Treatment:Coexposure | Sample source:Liver | Species:Chinook	Tank Replicate=L5; Experimental Replicate=3; RAW_FILE_NAME=352_CE_L5_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*286	286_CE_L5_1_CO	Treatment:Coexposure | Sample source:Liver | Species:Coho	Tank Replicate=L5; Experimental Replicate=1; RAW_FILE_NAME=286_CE_L5_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*302	302_AQ_L5_3_CO	Treatment:Anthraquinone | Sample source:Liver | Species:Coho	Tank Replicate=L5; Experimental Replicate=3; RAW_FILE_NAME=302_AQ_L5_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*291	291_AQ_L5_3_CH	Treatment:Anthraquinone | Sample source:Liver | Species:Chinook	Tank Replicate=L5; Experimental Replicate=3; RAW_FILE_NAME=291_AQ_L5_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*297	297_AQ_L5_2_CO	Treatment:Anthraquinone | Sample source:Liver | Species:Coho	Tank Replicate=L5; Experimental Replicate=2; RAW_FILE_NAME=297_AQ_L5_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*292	292_AQ_L5_1_RT	Treatment:Anthraquinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L5; Experimental Replicate=1; RAW_FILE_NAME=292_AQ_L5_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*425	425_AQ_L5_1_CO	Treatment:Anthraquinone | Sample source:Liver | Species:Coho	Tank Replicate=L5; Experimental Replicate=1; RAW_FILE_NAME=425_AQ_L5_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*316	316_AQ_L5_1_CH	Treatment:Anthraquinone | Sample source:Liver | Species:Chinook	Tank Replicate=L5; Experimental Replicate=1; RAW_FILE_NAME=316_AQ_L5_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*382	382_6Q_L5_2_RT	Treatment:6PPD-quinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L5; Experimental Replicate=2; RAW_FILE_NAME=382_6Q_L5_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*411	411_6Q_L5_2_CO	Treatment:6PPD-quinone | Sample source:Liver | Species:Coho	Tank Replicate=L5; Experimental Replicate=2; RAW_FILE_NAME=411_6Q_L5_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*298	298_6Q_L5_2_CH	Treatment:6PPD-quinone | Sample source:Liver | Species:Chinook	Tank Replicate=L5; Experimental Replicate=2; RAW_FILE_NAME=298_6Q_L5_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*274	274_6Q_L5_1_RT	Treatment:6PPD-quinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L5; Experimental Replicate=1; RAW_FILE_NAME=274_6Q_L5_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*284	284_6Q_L5_1_CH	Treatment:6PPD-quinone | Sample source:Liver | Species:Chinook	Tank Replicate=L5; Experimental Replicate=1; RAW_FILE_NAME=284_6Q_L5_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*306	306_UC_L4_3_RT	Treatment:Unfed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L4; Experimental Replicate=3; RAW_FILE_NAME=306_UC_L4_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*384	384_UC_L4_3_CO	Treatment:Unfed Control | Sample source:Liver | Species:Coho	Tank Replicate=L4; Experimental Replicate=3; RAW_FILE_NAME=384_UC_L4_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*349	349_UC_L4_3_CH	Treatment:Unfed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L4; Experimental Replicate=3; RAW_FILE_NAME=349_UC_L4_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*325	325_UC_L4_2_RT	Treatment:Unfed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L4; Experimental Replicate=2; RAW_FILE_NAME=325_UC_L4_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*326	326_UC_L4_2_CO	Treatment:Unfed Control | Sample source:Liver | Species:Coho	Tank Replicate=L4; Experimental Replicate=2; RAW_FILE_NAME=326_UC_L4_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*453	453_UC_L4_2_CH	Treatment:Unfed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L4; Experimental Replicate=2; RAW_FILE_NAME=453_UC_L4_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*340	340_UC_L4_1_CH	Treatment:Unfed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L4; Experimental Replicate=1; RAW_FILE_NAME=340_UC_L4_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*433	433_IN_L4_3_RT	Treatment:Insult | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L4; Experimental Replicate=3; RAW_FILE_NAME=433_IN_L4_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*393	393_IN_L4_3_CH	Treatment:Insult | Sample source:Liver | Species:Chinook	Tank Replicate=L4; Experimental Replicate=3; RAW_FILE_NAME=393_IN_L4_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*279	279_IN_L4_2_RT	Treatment:Insult | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L4; Experimental Replicate=2; RAW_FILE_NAME=279_IN_L4_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*398	398_IN_L4_2_CH	Treatment:Insult | Sample source:Liver | Species:Chinook	Tank Replicate=L4; Experimental Replicate=2; RAW_FILE_NAME=398_IN_L4_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*426	426_IN_L4_1_CO	Treatment:Insult | Sample source:Liver | Species:Coho	Tank Replicate=L4; Experimental Replicate=1; RAW_FILE_NAME=426_IN_L4_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*280	280_IN_L4_1_CH	Treatment:Insult | Sample source:Liver | Species:Chinook	Tank Replicate=L4; Experimental Replicate=1; RAW_FILE_NAME=280_IN_L4_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*332	332_FC_L4_3_CO	Treatment:Fed Control | Sample source:Liver | Species:Coho	Tank Replicate=L4; Experimental Replicate=3; RAW_FILE_NAME=332_FC_L4_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*421	421_FC_L4_2_RT	Treatment:Fed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L4; Experimental Replicate=2; RAW_FILE_NAME=421_FC_L4_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*383	383_FC_L4_2_CH	Treatment:Fed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L4; Experimental Replicate=2; RAW_FILE_NAME=383_FC_L4_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*388	388_FC_L4_1_RT	Treatment:Fed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L4; Experimental Replicate=1; RAW_FILE_NAME=388_FC_L4_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*312	312_FC_L4_1_CO	Treatment:Fed Control | Sample source:Liver | Species:Coho	Tank Replicate=L4; Experimental Replicate=1; RAW_FILE_NAME=312_FC_L4_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*317	317_CE_L4_3_RT	Treatment:Coexposure | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L4; Experimental Replicate=3; RAW_FILE_NAME=317_CE_L4_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*276	276_CE_L4_3_CO	Treatment:Coexposure | Sample source:Liver | Species:Coho	Tank Replicate=L4; Experimental Replicate=3; RAW_FILE_NAME=276_CE_L4_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*437	437_CE_L4_2_RT	Treatment:Coexposure | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L4; Experimental Replicate=2; RAW_FILE_NAME=437_CE_L4_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*438	438_CE_L4_2_CO	Treatment:Coexposure | Sample source:Liver | Species:Coho	Tank Replicate=L4; Experimental Replicate=2; RAW_FILE_NAME=438_CE_L4_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*271	271_CE_L4_2_CH	Treatment:Coexposure | Sample source:Liver | Species:Chinook	Tank Replicate=L4; Experimental Replicate=2; RAW_FILE_NAME=271_CE_L4_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*385	385_CE_L4_1_RT	Treatment:Coexposure | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L4; Experimental Replicate=1; RAW_FILE_NAME=385_CE_L4_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*424	424_CE_L4_1_CH	Treatment:Coexposure | Sample source:Liver | Species:Chinook	Tank Replicate=L4; Experimental Replicate=1; RAW_FILE_NAME=424_CE_L4_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*293	293_AQ_L4_3_RT	Treatment:Anthraquinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L4; Experimental Replicate=3; RAW_FILE_NAME=293_AQ_L4_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*324	324_AQ_L4_3_CO	Treatment:Anthraquinone | Sample source:Liver | Species:Coho	Tank Replicate=L4; Experimental Replicate=3; RAW_FILE_NAME=324_AQ_L4_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*406	406_AQ_L4_3_CH	Treatment:Anthraquinone | Sample source:Liver | Species:Chinook	Tank Replicate=L4; Experimental Replicate=3; RAW_FILE_NAME=406_AQ_L4_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*408	408_AQ_L4_2_RT	Treatment:Anthraquinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L4; Experimental Replicate=2; RAW_FILE_NAME=408_AQ_L4_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*391	391_AQ_L4_2_CH	Treatment:Anthraquinone | Sample source:Liver | Species:Chinook	Tank Replicate=L4; Experimental Replicate=2; RAW_FILE_NAME=391_AQ_L4_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*304	304_AQ_L4_1_RT	Treatment:Anthraquinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L4; Experimental Replicate=1; RAW_FILE_NAME=304_AQ_L4_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*386	386_AQ_L4_1_CO	Treatment:Anthraquinone | Sample source:Liver | Species:Coho	Tank Replicate=L4; Experimental Replicate=1; RAW_FILE_NAME=386_AQ_L4_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*313	313_6Q_L4_3_RT	Treatment:6PPD-quinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L4; Experimental Replicate=3; RAW_FILE_NAME=313_6Q_L4_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*378	378_6Q_L4_3_CH	Treatment:6PPD-quinone | Sample source:Liver | Species:Chinook	Tank Replicate=L4; Experimental Replicate=3; RAW_FILE_NAME=378_6Q_L4_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*329	329_6Q_L4_2_CO	Treatment:6PPD-quinone | Sample source:Liver | Species:Coho	Tank Replicate=L4; Experimental Replicate=2; RAW_FILE_NAME=329_6Q_L4_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*347	347_6Q_L4_1_CO	Treatment:6PPD-quinone | Sample source:Liver | Species:Coho	Tank Replicate=L4; Experimental Replicate=1; RAW_FILE_NAME=347_6Q_L4_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*282	282_6Q_L4_1_CH	Treatment:6PPD-quinone | Sample source:Liver | Species:Chinook	Tank Replicate=L4; Experimental Replicate=1; RAW_FILE_NAME=282_6Q_L4_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*338	338_UC_L3_3_CO	Treatment:Unfed Control | Sample source:Liver | Species:Coho	Tank Replicate=L3; Experimental Replicate=3; RAW_FILE_NAME=338_UC_L3_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*376	376_UC_L3_2_CO	Treatment:Unfed Control | Sample source:Liver | Species:Coho	Tank Replicate=L3; Experimental Replicate=2; RAW_FILE_NAME=376_UC_L3_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*290	290_UC_L3_2_CH	Treatment:Unfed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L3; Experimental Replicate=2; RAW_FILE_NAME=290_UC_L3_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*407	407_UC_L3_1_CH	Treatment:Unfed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L3; Experimental Replicate=1; RAW_FILE_NAME=407_UC_L3_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*272	272_IN_L3_3_CH	Treatment:Insult | Sample source:Liver | Species:Chinook	Tank Replicate=L3; Experimental Replicate=3; RAW_FILE_NAME=272_IN_L3_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*431	431_IN_L3_2_RT	Treatment:Insult | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L3; Experimental Replicate=2; RAW_FILE_NAME=431_IN_L3_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*442	442_IN_L3_2_CH	Treatment:Insult | Sample source:Liver | Species:Chinook	Tank Replicate=L3; Experimental Replicate=2; RAW_FILE_NAME=442_IN_L3_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*344	344_IN_L3_1_RT	Treatment:Insult | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L3; Experimental Replicate=1; RAW_FILE_NAME=344_IN_L3_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*387	387_IN_L3_1_CO	Treatment:Insult | Sample source:Liver | Species:Coho	Tank Replicate=L3; Experimental Replicate=1; RAW_FILE_NAME=387_IN_L3_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*350	350_FC_L3_3_CO	Treatment:Fed Control | Sample source:Liver | Species:Coho	Tank Replicate=L3; Experimental Replicate=3; RAW_FILE_NAME=350_FC_L3_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*397	397_FC_L3_3_CH	Treatment:Fed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L3; Experimental Replicate=3; RAW_FILE_NAME=397_FC_L3_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*439	439_FC_L3_2_CH	Treatment:Fed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L3; Experimental Replicate=2; RAW_FILE_NAME=439_FC_L3_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*416	416_FC_L3_1_RT	Treatment:Fed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L3; Experimental Replicate=1; RAW_FILE_NAME=416_FC_L3_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*402	402_FC_L3_1_CO	Treatment:Fed Control | Sample source:Liver | Species:Coho	Tank Replicate=L3; Experimental Replicate=1; RAW_FILE_NAME=402_FC_L3_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*395	395_FC_L3_1_CH	Treatment:Fed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L3; Experimental Replicate=1; RAW_FILE_NAME=395_FC_L3_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*446	446_CE_L3_3_RT	Treatment:Coexposure | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L3; Experimental Replicate=3; RAW_FILE_NAME=446_CE_L3_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*372	372_CE_L3_3_CH	Treatment:Coexposure | Sample source:Liver | Species:Chinook	Tank Replicate=L3; Experimental Replicate=3; RAW_FILE_NAME=372_CE_L3_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*300	300_CE_L3_2_RT	Treatment:Coexposure | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L3; Experimental Replicate=2; RAW_FILE_NAME=300_CE_L3_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*410	410_CE_L3_2_CO	Treatment:Coexposure | Sample source:Liver | Species:Coho	Tank Replicate=L3; Experimental Replicate=2; RAW_FILE_NAME=410_CE_L3_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*275	275_CE_L3_1_CO	Treatment:Coexposure | Sample source:Liver | Species:Coho	Tank Replicate=L3; Experimental Replicate=1; RAW_FILE_NAME=275_CE_L3_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*309	309_AQ_L3_3_RT	Treatment:Anthraquinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L3; Experimental Replicate=3; RAW_FILE_NAME=309_AQ_L3_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*412	412_AQ_L3_3_CO	Treatment:Anthraquinone | Sample source:Liver | Species:Coho	Tank Replicate=L3; Experimental Replicate=3; RAW_FILE_NAME=412_AQ_L3_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*427	427_AQ_L3_2_RT	Treatment:Anthraquinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L3; Experimental Replicate=2; RAW_FILE_NAME=427_AQ_L3_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*337	337_AQ_L3_2_CO	Treatment:Anthraquinone | Sample source:Liver | Species:Coho	Tank Replicate=L3; Experimental Replicate=2; RAW_FILE_NAME=337_AQ_L3_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*374	374_AQ_L3_1_RT	Treatment:Anthraquinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L3; Experimental Replicate=1; RAW_FILE_NAME=374_AQ_L3_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*440	440_AQ_L3_1_CO	Treatment:Anthraquinone | Sample source:Liver | Species:Coho	Tank Replicate=L3; Experimental Replicate=1; RAW_FILE_NAME=440_AQ_L3_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*429	429_6Q_L3_3_RT	Treatment:6PPD-quinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L3; Experimental Replicate=3; RAW_FILE_NAME=429_6Q_L3_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*418	418_6Q_L3_3_CO	Treatment:6PPD-quinone | Sample source:Liver | Species:Coho	Tank Replicate=L3; Experimental Replicate=3; RAW_FILE_NAME=418_6Q_L3_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*428	428_6Q_L3_2_RT	Treatment:6PPD-quinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L3; Experimental Replicate=2; RAW_FILE_NAME=428_6Q_L3_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*435	435_6Q_L3_2_CO	Treatment:6PPD-quinone | Sample source:Liver | Species:Coho	Tank Replicate=L3; Experimental Replicate=2; RAW_FILE_NAME=435_6Q_L3_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*346	346_6Q_L3_2_CH	Treatment:6PPD-quinone | Sample source:Liver | Species:Chinook	Tank Replicate=L3; Experimental Replicate=2; RAW_FILE_NAME=346_6Q_L3_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*281	281_6Q_L3_1_CH	Treatment:6PPD-quinone | Sample source:Liver | Species:Chinook	Tank Replicate=L3; Experimental Replicate=1; RAW_FILE_NAME=281_6Q_L3_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*445	445_UC_L2_3_RT	Treatment:Unfed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L2; Experimental Replicate=3; RAW_FILE_NAME=445_UC_L2_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*345	345_UC_L2_2_RT	Treatment:Unfed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L2; Experimental Replicate=2; RAW_FILE_NAME=345_UC_L2_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*335	335_UC_L2_2_CO	Treatment:Unfed Control | Sample source:Liver | Species:Coho	Tank Replicate=L2; Experimental Replicate=2; RAW_FILE_NAME=335_UC_L2_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*452	452_UC_L2_2_CH	Treatment:Unfed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L2; Experimental Replicate=2; RAW_FILE_NAME=452_UC_L2_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*375	375_UC_L2_1_CH	Treatment:Unfed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L2; Experimental Replicate=1; RAW_FILE_NAME=375_UC_L2_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*413	413_IN_L2_3_RT	Treatment:Insult | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L2; Experimental Replicate=3; RAW_FILE_NAME=413_IN_L2_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*310	310_IN_L2_2_RT	Treatment:Insult | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L2; Experimental Replicate=2; RAW_FILE_NAME=310_IN_L2_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*434	434_IN_L2_2_CO	Treatment:Insult | Sample source:Liver | Species:Coho	Tank Replicate=L2; Experimental Replicate=2; RAW_FILE_NAME=434_IN_L2_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*307	307_IN_L2_2_CH	Treatment:Insult | Sample source:Liver | Species:Chinook	Tank Replicate=L2; Experimental Replicate=2; RAW_FILE_NAME=307_IN_L2_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*333	333_IN_L2_1_CO	Treatment:Insult | Sample source:Liver | Species:Coho	Tank Replicate=L2; Experimental Replicate=1; RAW_FILE_NAME=333_IN_L2_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*409	409_IN_L2_1_CH	Treatment:Insult | Sample source:Liver | Species:Chinook	Tank Replicate=L2; Experimental Replicate=1; RAW_FILE_NAME=409_IN_L2_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*443	443_FC_L2_3_CO	Treatment:Fed Control | Sample source:Liver | Species:Coho	Tank Replicate=L2; Experimental Replicate=3; RAW_FILE_NAME=443_FC_L2_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*450	450_FC_L2_2_RT	Treatment:Fed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L2; Experimental Replicate=2; RAW_FILE_NAME=450_FC_L2_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*377	377_FC_L2_1_RT	Treatment:Fed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L2; Experimental Replicate=1; RAW_FILE_NAME=377_FC_L2_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*334	334_FC_L2_1_CO	Treatment:Fed Control | Sample source:Liver | Species:Coho	Tank Replicate=L2; Experimental Replicate=1; RAW_FILE_NAME=334_FC_L2_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*319	319_FC_L2_1_CH	Treatment:Fed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L2; Experimental Replicate=1; RAW_FILE_NAME=319_FC_L2_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*417	417_CE_L2_3_CH	Treatment:Coexposure | Sample source:Liver | Species:Chinook	Tank Replicate=L2; Experimental Replicate=3; RAW_FILE_NAME=417_CE_L2_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*327	327_CE_L2_2_CO	Treatment:Coexposure | Sample source:Liver | Species:Coho	Tank Replicate=L2; Experimental Replicate=2; RAW_FILE_NAME=327_CE_L2_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*451	451_CE_L2_2_CH	Treatment:Coexposure | Sample source:Liver | Species:Chinook	Tank Replicate=L2; Experimental Replicate=2; RAW_FILE_NAME=451_CE_L2_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*381	381_AQ_L2_3_RT	Treatment:Anthraquinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L2; Experimental Replicate=3; RAW_FILE_NAME=381_AQ_L2_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*296	296_AQ_L2_3_CO	Treatment:Anthraquinone | Sample source:Liver | Species:Coho	Tank Replicate=L2; Experimental Replicate=3; RAW_FILE_NAME=296_AQ_L2_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*287	287_AQ_L2_2_RT	Treatment:Anthraquinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L2; Experimental Replicate=2; RAW_FILE_NAME=287_AQ_L2_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*430	430_AQ_L2_2_CO	Treatment:Anthraquinone | Sample source:Liver | Species:Coho	Tank Replicate=L2; Experimental Replicate=2; RAW_FILE_NAME=430_AQ_L2_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*289	289_AQ_L2_2_CH	Treatment:Anthraquinone | Sample source:Liver | Species:Chinook	Tank Replicate=L2; Experimental Replicate=2; RAW_FILE_NAME=289_AQ_L2_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*303	303_6Q_L2_3_CO	Treatment:6PPD-quinone | Sample source:Liver | Species:Coho	Tank Replicate=L2; Experimental Replicate=3; RAW_FILE_NAME=303_6Q_L2_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*353	353_6Q_L2_3_CH	Treatment:6PPD-quinone | Sample source:Liver | Species:Chinook	Tank Replicate=L2; Experimental Replicate=3; RAW_FILE_NAME=353_6Q_L2_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*328	328_6Q_L2_2_CO	Treatment:6PPD-quinone | Sample source:Liver | Species:Coho	Tank Replicate=L2; Experimental Replicate=2; RAW_FILE_NAME=328_6Q_L2_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*343	343_6Q_L2_2_CH	Treatment:6PPD-quinone | Sample source:Liver | Species:Chinook	Tank Replicate=L2; Experimental Replicate=2; RAW_FILE_NAME=343_6Q_L2_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*399	399_6Q_L2_1_CH	Treatment:6PPD-quinone | Sample source:Liver | Species:Chinook	Tank Replicate=L2; Experimental Replicate=1; RAW_FILE_NAME=399_6Q_L2_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*390	390_UC_L1_3_RT	Treatment:Unfed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L1; Experimental Replicate=3; RAW_FILE_NAME=390_UC_L1_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*336	336_UC_L1_3_CH	Treatment:Unfed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L1; Experimental Replicate=3; RAW_FILE_NAME=336_UC_L1_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*394	394_UC_L1_2_CO	Treatment:Unfed Control | Sample source:Liver | Species:Coho	Tank Replicate=L1; Experimental Replicate=2; RAW_FILE_NAME=394_UC_L1_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*448	448_UC_L1_2_CH	Treatment:Unfed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L1; Experimental Replicate=2; RAW_FILE_NAME=448_UC_L1_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*341	341_UC_L1_1_RT	Treatment:Unfed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L1; Experimental Replicate=1; RAW_FILE_NAME=341_UC_L1_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*311	311_UC_L1_1_CH	Treatment:Unfed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L1; Experimental Replicate=1; RAW_FILE_NAME=311_UC_L1_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*373	373_IN_L1_3_RT	Treatment:Insult | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L1; Experimental Replicate=3; RAW_FILE_NAME=373_IN_L1_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*301	301_IN_L1_3_CO	Treatment:Insult | Sample source:Liver | Species:Coho	Tank Replicate=L1; Experimental Replicate=3; RAW_FILE_NAME=301_IN_L1_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*318	318_IN_L1_2_CO	Treatment:Insult | Sample source:Liver | Species:Coho	Tank Replicate=L1; Experimental Replicate=2; RAW_FILE_NAME=318_IN_L1_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*419	419_IN_L1_2_CH	Treatment:Insult | Sample source:Liver | Species:Chinook	Tank Replicate=L1; Experimental Replicate=2; RAW_FILE_NAME=419_IN_L1_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*436	436_IN_L1_1_RT	Treatment:Insult | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L1; Experimental Replicate=1; RAW_FILE_NAME=436_IN_L1_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*414	414_IN_L1_1_CO	Treatment:Insult | Sample source:Liver | Species:Coho	Tank Replicate=L1; Experimental Replicate=1; RAW_FILE_NAME=414_IN_L1_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*389	389_IN_L1_1_CH	Treatment:Insult | Sample source:Liver | Species:Chinook	Tank Replicate=L1; Experimental Replicate=1; RAW_FILE_NAME=389_IN_L1_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*401	401_FC_L1_3_RT	Treatment:Fed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L1; Experimental Replicate=3; RAW_FILE_NAME=401_FC_L1_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*420	420_FC_L1_3_CO	Treatment:Fed Control | Sample source:Liver | Species:Coho	Tank Replicate=L1; Experimental Replicate=3; RAW_FILE_NAME=420_FC_L1_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*447	447_FC_L1_3_CH	Treatment:Fed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L1; Experimental Replicate=3; RAW_FILE_NAME=447_FC_L1_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*314	314_FC_L1_2_RT	Treatment:Fed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L1; Experimental Replicate=2; RAW_FILE_NAME=314_FC_L1_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*444	444_FC_L1_2_CO	Treatment:Fed Control | Sample source:Liver | Species:Coho	Tank Replicate=L1; Experimental Replicate=2; RAW_FILE_NAME=444_FC_L1_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*285	285_FC_L1_1_CO	Treatment:Fed Control | Sample source:Liver | Species:Coho	Tank Replicate=L1; Experimental Replicate=1; RAW_FILE_NAME=285_FC_L1_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*294	294_FC_L1_1_CH	Treatment:Fed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L1; Experimental Replicate=1; RAW_FILE_NAME=294_FC_L1_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*432	432_CE_L1_3_CO	Treatment:Coexposure | Sample source:Liver | Species:Coho	Tank Replicate=L1; Experimental Replicate=3; RAW_FILE_NAME=432_CE_L1_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*404	404_CE_L1_3_CH	Treatment:Coexposure | Sample source:Liver | Species:Chinook	Tank Replicate=L1; Experimental Replicate=3; RAW_FILE_NAME=404_CE_L1_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*283	283_CE_L1_2_CO	Treatment:Coexposure | Sample source:Liver | Species:Coho	Tank Replicate=L1; Experimental Replicate=2; RAW_FILE_NAME=283_CE_L1_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*273	273_CE_L1_2_CH	Treatment:Coexposure | Sample source:Liver | Species:Chinook	Tank Replicate=L1; Experimental Replicate=2; RAW_FILE_NAME=273_CE_L1_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*396	396_CE_L1_1_RT	Treatment:Coexposure | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L1; Experimental Replicate=1; RAW_FILE_NAME=396_CE_L1_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*295	295_CE_L1_1_CH	Treatment:Coexposure | Sample source:Liver | Species:Chinook	Tank Replicate=L1; Experimental Replicate=1; RAW_FILE_NAME=295_CE_L1_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*330	330_AQ_L1_3_RT	Treatment:Anthraquinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L1; Experimental Replicate=3; RAW_FILE_NAME=330_AQ_L1_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*299	299_AQ_L1_3_CO	Treatment:Anthraquinone | Sample source:Liver | Species:Coho	Tank Replicate=L1; Experimental Replicate=3; RAW_FILE_NAME=299_AQ_L1_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*351	351_AQ_L1_3_CH	Treatment:Anthraquinone | Sample source:Liver | Species:Chinook	Tank Replicate=L1; Experimental Replicate=3; RAW_FILE_NAME=351_AQ_L1_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*278	278_AQ_L1_2_CO	Treatment:Anthraquinone | Sample source:Liver | Species:Coho	Tank Replicate=L1; Experimental Replicate=2; RAW_FILE_NAME=278_AQ_L1_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*322	322_AQ_L1_1_RT	Treatment:Anthraquinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L1; Experimental Replicate=1; RAW_FILE_NAME=322_AQ_L1_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*339	339_AQ_L1_1_CO	Treatment:Anthraquinone | Sample source:Liver | Species:Coho	Tank Replicate=L1; Experimental Replicate=1; RAW_FILE_NAME=339_AQ_L1_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*392	392_AQ_L1_1_CH	Treatment:Anthraquinone | Sample source:Liver | Species:Chinook	Tank Replicate=L1; Experimental Replicate=1; RAW_FILE_NAME=392_AQ_L1_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*380	380_6Q_L1_3_RT	Treatment:6PPD-quinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L1; Experimental Replicate=3; RAW_FILE_NAME=380_6Q_L1_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*348	348_6Q_L1_3_CH	Treatment:6PPD-quinone | Sample source:Liver | Species:Chinook	Tank Replicate=L1; Experimental Replicate=3; RAW_FILE_NAME=348_6Q_L1_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	*379	379_6Q_L1_2_RT	Treatment:6PPD-quinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L1; Experimental Replicate=2; RAW_FILE_NAME=379_6Q_L1_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*405	405_6Q_L1_2_CO	Treatment:6PPD-quinone | Sample source:Liver | Species:Coho	Tank Replicate=L1; Experimental Replicate=2; RAW_FILE_NAME=405_6Q_L1_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	*400	400_6Q_L1_1_RT	Treatment:6PPD-quinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L1; Experimental Replicate=1; RAW_FILE_NAME=400_6Q_L1_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	*403	403_6Q_L1_1_CH	Treatment:6PPD-quinone | Sample source:Liver | Species:Chinook	Tank Replicate=L1; Experimental Replicate=1; RAW_FILE_NAME=403_6Q_L1_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	521	521_UC_L5_2_RT	Treatment:Unfed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L5; Experimental Replicate=2; RAW_FILE_NAME=521_UC_L5_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	466	466_UC_L5_1_RT	Treatment:Unfed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L5; Experimental Replicate=1; RAW_FILE_NAME=466_UC_L5_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	498	498_IN_L5_3_RT	Treatment:Insult | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L5; Experimental Replicate=3; RAW_FILE_NAME=498_IN_L5_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	491	491_IN_L5_3_CH	Treatment:Insult | Sample source:Liver | Species:Chinook	Tank Replicate=L5; Experimental Replicate=3; RAW_FILE_NAME=491_IN_L5_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	364	364_IN_L5_2_RT	Treatment:Insult | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L5; Experimental Replicate=2; RAW_FILE_NAME=364_IN_L5_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	495	495_IN_L5_2_CO	Treatment:Insult | Sample source:Liver | Species:Coho	Tank Replicate=L5; Experimental Replicate=2; RAW_FILE_NAME=495_IN_L5_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	369	369_IN_L5_1_CO	Treatment:Insult | Sample source:Liver | Species:Coho	Tank Replicate=L5; Experimental Replicate=1; RAW_FILE_NAME=369_IN_L5_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	366	366_IN_L5_1_CH	Treatment:Insult | Sample source:Liver | Species:Chinook	Tank Replicate=L5; Experimental Replicate=1; RAW_FILE_NAME=366_IN_L5_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	505	505_FC_L5_3_RT	Treatment:Fed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L5; Experimental Replicate=3; RAW_FILE_NAME=505_FC_L5_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	358	358_FC_L5_3_CO	Treatment:Fed Control | Sample source:Liver | Species:Coho	Tank Replicate=L5; Experimental Replicate=3; RAW_FILE_NAME=358_FC_L5_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	530	530_FC_L5_2_CO	Treatment:Fed Control | Sample source:Liver | Species:Coho	Tank Replicate=L5; Experimental Replicate=2; RAW_FILE_NAME=530_FC_L5_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	469	469_FC_L5_2_CH	Treatment:Fed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L5; Experimental Replicate=2; RAW_FILE_NAME=469_FC_L5_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	487	487_CE_L5_3_CO	Treatment:Coexposure | Sample source:Liver | Species:Coho	Tank Replicate=L5; Experimental Replicate=3; RAW_FILE_NAME=487_CE_L5_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	479	479_CE_L5_2_RT	Treatment:Coexposure | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L5; Experimental Replicate=2; RAW_FILE_NAME=479_CE_L5_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	540	540_CE_L5_2_CO	Treatment:Coexposure | Sample source:Liver | Species:Coho	Tank Replicate=L5; Experimental Replicate=2; RAW_FILE_NAME=540_CE_L5_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	470	470_CE_L5_2_CH	Treatment:Coexposure | Sample source:Liver | Species:Chinook	Tank Replicate=L5; Experimental Replicate=2; RAW_FILE_NAME=470_CE_L5_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	464	464_CE_L5_1_RT	Treatment:Coexposure | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L5; Experimental Replicate=1; RAW_FILE_NAME=464_CE_L5_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	362	362_CE_L5_1_CH	Treatment:Coexposure | Sample source:Liver | Species:Chinook	Tank Replicate=L5; Experimental Replicate=1; RAW_FILE_NAME=362_CE_L5_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	535	535_AQ_L5_3_RT	Treatment:Anthraquinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L5; Experimental Replicate=3; RAW_FILE_NAME=535_AQ_L5_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	471	471_AQ_L5_2_RT	Treatment:Anthraquinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L5; Experimental Replicate=2; RAW_FILE_NAME=471_AQ_L5_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	493	493_AQ_L5_2_CH	Treatment:Anthraquinone | Sample source:Liver | Species:Chinook	Tank Replicate=L5; Experimental Replicate=2; RAW_FILE_NAME=493_AQ_L5_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	458	458_6Q_L5_3_RT	Treatment:6PPD-quinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L5; Experimental Replicate=3; RAW_FILE_NAME=458_6Q_L5_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	511	511_6Q_L5_3_CO	Treatment:6PPD-quinone | Sample source:Liver | Species:Coho	Tank Replicate=L5; Experimental Replicate=3; RAW_FILE_NAME=511_6Q_L5_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	538	538_6Q_L5_3_CH	Treatment:6PPD-quinone | Sample source:Liver | Species:Chinook	Tank Replicate=L5; Experimental Replicate=3; RAW_FILE_NAME=538_6Q_L5_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	513	513_6Q_L5_1_CO	Treatment:6PPD-quinone | Sample source:Liver | Species:Coho	Tank Replicate=L5; Experimental Replicate=1; RAW_FILE_NAME=513_6Q_L5_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	368	368_UC_L4_1_RT	Treatment:Unfed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L4; Experimental Replicate=1; RAW_FILE_NAME=368_UC_L4_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	367	367_UC_L4_1_CO	Treatment:Unfed Control | Sample source:Liver | Species:Coho	Tank Replicate=L4; Experimental Replicate=1; RAW_FILE_NAME=367_UC_L4_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	534	534_IN_L4_3_CO	Treatment:Insult | Sample source:Liver | Species:Coho	Tank Replicate=L4; Experimental Replicate=3; RAW_FILE_NAME=534_IN_L4_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	462	462_IN_L4_2_CO	Treatment:Insult | Sample source:Liver | Species:Coho	Tank Replicate=L4; Experimental Replicate=2; RAW_FILE_NAME=462_IN_L4_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	355	355_IN_L4_1_RT	Treatment:Insult | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L4; Experimental Replicate=1; RAW_FILE_NAME=355_IN_L4_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	357	357_FC_L4_3_RT	Treatment:Fed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L4; Experimental Replicate=3; RAW_FILE_NAME=357_FC_L4_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	457	457_FC_L4_3_CH	Treatment:Fed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L4; Experimental Replicate=3; RAW_FILE_NAME=457_FC_L4_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	532	532_FC_L4_2_CO	Treatment:Fed Control | Sample source:Liver | Species:Coho	Tank Replicate=L4; Experimental Replicate=2; RAW_FILE_NAME=532_FC_L4_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	515	515_FC_L4_1_CH	Treatment:Fed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L4; Experimental Replicate=1; RAW_FILE_NAME=515_FC_L4_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	522	522_CE_L4_3_CH	Treatment:Coexposure | Sample source:Liver | Species:Chinook	Tank Replicate=L4; Experimental Replicate=3; RAW_FILE_NAME=522_CE_L4_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	456	456_CE_L4_1_CO	Treatment:Coexposure | Sample source:Liver | Species:Coho	Tank Replicate=L4; Experimental Replicate=1; RAW_FILE_NAME=456_CE_L4_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	356	356_AQ_L4_2_CO	Treatment:Anthraquinone | Sample source:Liver | Species:Coho	Tank Replicate=L4; Experimental Replicate=2; RAW_FILE_NAME=356_AQ_L4_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	485	485_AQ_L4_1_CH	Treatment:Anthraquinone | Sample source:Liver | Species:Chinook	Tank Replicate=L4; Experimental Replicate=1; RAW_FILE_NAME=485_AQ_L4_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	514	514_6Q_L4_3_CO	Treatment:6PPD-quinone | Sample source:Liver | Species:Coho	Tank Replicate=L4; Experimental Replicate=3; RAW_FILE_NAME=514_6Q_L4_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	496	496_6Q_L4_2_RT	Treatment:6PPD-quinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L4; Experimental Replicate=2; RAW_FILE_NAME=496_6Q_L4_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	499	499_6Q_L4_2_CH	Treatment:6PPD-quinone | Sample source:Liver | Species:Chinook	Tank Replicate=L4; Experimental Replicate=2; RAW_FILE_NAME=499_6Q_L4_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	497	497_6Q_L4_1_RT	Treatment:6PPD-quinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L4; Experimental Replicate=1; RAW_FILE_NAME=497_6Q_L4_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	501	501_UC_L3_3_RT	Treatment:Unfed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L3; Experimental Replicate=3; RAW_FILE_NAME=501_UC_L3_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	506	506_UC_L3_3_CH	Treatment:Unfed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L3; Experimental Replicate=3; RAW_FILE_NAME=506_UC_L3_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	524	524_UC_L3_2_RT	Treatment:Unfed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L3; Experimental Replicate=2; RAW_FILE_NAME=524_UC_L3_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	461	461_UC_L3_1_RT	Treatment:Unfed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L3; Experimental Replicate=1; RAW_FILE_NAME=461_UC_L3_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	510	510_UC_L3_1_CO	Treatment:Unfed Control | Sample source:Liver | Species:Coho	Tank Replicate=L3; Experimental Replicate=1; RAW_FILE_NAME=510_UC_L3_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	467	467_IN_L3_3_RT	Treatment:Insult | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L3; Experimental Replicate=3; RAW_FILE_NAME=467_IN_L3_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	370	370_IN_L3_3_CO	Treatment:Insult | Sample source:Liver | Species:Coho	Tank Replicate=L3; Experimental Replicate=3; RAW_FILE_NAME=370_IN_L3_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	507	507_IN_L3_2_CO	Treatment:Insult | Sample source:Liver | Species:Coho	Tank Replicate=L3; Experimental Replicate=2; RAW_FILE_NAME=507_IN_L3_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	465	465_IN_L3_1_CH	Treatment:Insult | Sample source:Liver | Species:Chinook	Tank Replicate=L3; Experimental Replicate=1; RAW_FILE_NAME=465_IN_L3_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	477	477_FC_L3_3_RT	Treatment:Fed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L3; Experimental Replicate=3; RAW_FILE_NAME=477_FC_L3_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	512	512_FC_L3_2_RT	Treatment:Fed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L3; Experimental Replicate=2; RAW_FILE_NAME=512_FC_L3_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	502	502_FC_L3_2_CO	Treatment:Fed Control | Sample source:Liver | Species:Coho	Tank Replicate=L3; Experimental Replicate=2; RAW_FILE_NAME=502_FC_L3_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	520	520_CE_L3_3_CO	Treatment:Coexposure | Sample source:Liver | Species:Coho	Tank Replicate=L3; Experimental Replicate=3; RAW_FILE_NAME=520_CE_L3_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	526	526_CE_L3_2_CH	Treatment:Coexposure | Sample source:Liver | Species:Chinook	Tank Replicate=L3; Experimental Replicate=2; RAW_FILE_NAME=526_CE_L3_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	518	518_CE_L3_1_RT	Treatment:Coexposure | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L3; Experimental Replicate=1; RAW_FILE_NAME=518_CE_L3_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	509	509_CE_L3_1_CH	Treatment:Coexposure | Sample source:Liver | Species:Chinook	Tank Replicate=L3; Experimental Replicate=1; RAW_FILE_NAME=509_CE_L3_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	489	489_AQ_L3_3_CH	Treatment:Anthraquinone | Sample source:Liver | Species:Chinook	Tank Replicate=L3; Experimental Replicate=3; RAW_FILE_NAME=489_AQ_L3_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	492	492_AQ_L3_2_CH	Treatment:Anthraquinone | Sample source:Liver | Species:Chinook	Tank Replicate=L3; Experimental Replicate=2; RAW_FILE_NAME=492_AQ_L3_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	459	459_AQ_L3_1_CH	Treatment:Anthraquinone | Sample source:Liver | Species:Chinook	Tank Replicate=L3; Experimental Replicate=1; RAW_FILE_NAME=459_AQ_L3_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	481	481_6Q_L3_3_CH	Treatment:6PPD-quinone | Sample source:Liver | Species:Chinook	Tank Replicate=L3; Experimental Replicate=3; RAW_FILE_NAME=481_6Q_L3_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	363	363_6Q_L3_1_RT	Treatment:6PPD-quinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L3; Experimental Replicate=1; RAW_FILE_NAME=363_6Q_L3_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	517	517_6Q_L3_1_CO	Treatment:6PPD-quinone | Sample source:Liver | Species:Coho	Tank Replicate=L3; Experimental Replicate=1; RAW_FILE_NAME=517_6Q_L3_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	454	454_UC_L2_3_CO	Treatment:Unfed Control | Sample source:Liver | Species:Coho	Tank Replicate=L2; Experimental Replicate=3; RAW_FILE_NAME=454_UC_L2_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	468	468_UC_L2_3_CH	Treatment:Unfed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L2; Experimental Replicate=3; RAW_FILE_NAME=468_UC_L2_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	482	482_UC_L2_1_RT	Treatment:Unfed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L2; Experimental Replicate=1; RAW_FILE_NAME=482_UC_L2_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	359	359_UC_L2_1_CO	Treatment:Unfed Control | Sample source:Liver | Species:Coho	Tank Replicate=L2; Experimental Replicate=1; RAW_FILE_NAME=359_UC_L2_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	516	516_IN_L2_3_CO	Treatment:Insult | Sample source:Liver | Species:Coho	Tank Replicate=L2; Experimental Replicate=3; RAW_FILE_NAME=516_IN_L2_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	354	354_IN_L2_3_CH	Treatment:Insult | Sample source:Liver | Species:Chinook	Tank Replicate=L2; Experimental Replicate=3; RAW_FILE_NAME=354_IN_L2_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	533	533_IN_L2_1_RT	Treatment:Insult | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L2; Experimental Replicate=1; RAW_FILE_NAME=533_IN_L2_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	483	483_FC_L2_3_RT	Treatment:Fed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L2; Experimental Replicate=3; RAW_FILE_NAME=483_FC_L2_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	537	537_FC_L2_3_CH	Treatment:Fed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L2; Experimental Replicate=3; RAW_FILE_NAME=537_FC_L2_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	494	494_FC_L2_2_CO	Treatment:Fed Control | Sample source:Liver | Species:Coho	Tank Replicate=L2; Experimental Replicate=2; RAW_FILE_NAME=494_FC_L2_2_CO.mzML
SUBJECT_SAMPLE_FACTORS           	539	539_FC_L2_2_CH	Treatment:Fed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L2; Experimental Replicate=2; RAW_FILE_NAME=539_FC_L2_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	480	480_CE_L2_3_RT	Treatment:Coexposure | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L2; Experimental Replicate=3; RAW_FILE_NAME=480_CE_L2_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	486	486_CE_L2_3_CO	Treatment:Coexposure | Sample source:Liver | Species:Coho	Tank Replicate=L2; Experimental Replicate=3; RAW_FILE_NAME=486_CE_L2_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	508	508_CE_L2_2_RT	Treatment:Coexposure | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L2; Experimental Replicate=2; RAW_FILE_NAME=508_CE_L2_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	527	527_CE_L2_1_RT	Treatment:Coexposure | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L2; Experimental Replicate=1; RAW_FILE_NAME=527_CE_L2_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	360	360_CE_L2_1_CO	Treatment:Coexposure | Sample source:Liver | Species:Coho	Tank Replicate=L2; Experimental Replicate=1; RAW_FILE_NAME=360_CE_L2_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	500	500_CE_L2_1_CH	Treatment:Coexposure | Sample source:Liver | Species:Chinook	Tank Replicate=L2; Experimental Replicate=1; RAW_FILE_NAME=500_CE_L2_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	365	365_AQ_L2_3_CH	Treatment:Anthraquinone | Sample source:Liver | Species:Chinook	Tank Replicate=L2; Experimental Replicate=3; RAW_FILE_NAME=365_AQ_L2_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	503	503_AQ_L2_1_RT	Treatment:Anthraquinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L2; Experimental Replicate=1; RAW_FILE_NAME=503_AQ_L2_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	484	484_AQ_L2_1_CO	Treatment:Anthraquinone | Sample source:Liver | Species:Coho	Tank Replicate=L2; Experimental Replicate=1; RAW_FILE_NAME=484_AQ_L2_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	528	528_AQ_L2_1_CH	Treatment:Anthraquinone | Sample source:Liver | Species:Chinook	Tank Replicate=L2; Experimental Replicate=1; RAW_FILE_NAME=528_AQ_L2_1_CH.mzML
SUBJECT_SAMPLE_FACTORS           	488	488_6Q_L2_3_RT	Treatment:6PPD-quinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L2; Experimental Replicate=3; RAW_FILE_NAME=488_6Q_L2_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	460	460_6Q_L2_2_RT	Treatment:6PPD-quinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L2; Experimental Replicate=2; RAW_FILE_NAME=460_6Q_L2_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	472	472_6Q_L2_1_RT	Treatment:6PPD-quinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L2; Experimental Replicate=1; RAW_FILE_NAME=472_6Q_L2_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	531	531_6Q_L2_1_CO	Treatment:6PPD-quinone | Sample source:Liver | Species:Coho	Tank Replicate=L2; Experimental Replicate=1; RAW_FILE_NAME=531_6Q_L2_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	536	536_UC_L1_3_CO	Treatment:Unfed Control | Sample source:Liver | Species:Coho	Tank Replicate=L1; Experimental Replicate=3; RAW_FILE_NAME=536_UC_L1_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	529	529_UC_L1_2_RT	Treatment:Unfed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L1; Experimental Replicate=2; RAW_FILE_NAME=529_UC_L1_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	504	504_UC_L1_1_CO	Treatment:Unfed Control | Sample source:Liver | Species:Coho	Tank Replicate=L1; Experimental Replicate=1; RAW_FILE_NAME=504_UC_L1_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	463	463_IN_L1_3_CH	Treatment:Insult | Sample source:Liver | Species:Chinook	Tank Replicate=L1; Experimental Replicate=3; RAW_FILE_NAME=463_IN_L1_3_CH.mzML
SUBJECT_SAMPLE_FACTORS           	361	361_IN_L1_2_RT	Treatment:Insult | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L1; Experimental Replicate=2; RAW_FILE_NAME=361_IN_L1_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	478	478_FC_L1_2_CH	Treatment:Fed Control | Sample source:Liver | Species:Chinook	Tank Replicate=L1; Experimental Replicate=2; RAW_FILE_NAME=478_FC_L1_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	519	519_FC_L1_1_RT	Treatment:Fed Control | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L1; Experimental Replicate=1; RAW_FILE_NAME=519_FC_L1_1_RT.mzML
SUBJECT_SAMPLE_FACTORS           	523	523_CE_L1_3_RT	Treatment:Coexposure | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L1; Experimental Replicate=3; RAW_FILE_NAME=523_CE_L1_3_RT.mzML
SUBJECT_SAMPLE_FACTORS           	474	474_CE_L1_2_RT	Treatment:Coexposure | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L1; Experimental Replicate=2; RAW_FILE_NAME=474_CE_L1_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	473	473_CE_L1_1_CO	Treatment:Coexposure | Sample source:Liver | Species:Coho	Tank Replicate=L1; Experimental Replicate=1; RAW_FILE_NAME=473_CE_L1_1_CO.mzML
SUBJECT_SAMPLE_FACTORS           	490	490_AQ_L1_2_RT	Treatment:Anthraquinone | Sample source:Liver | Species:Rainbow Trout	Tank Replicate=L1; Experimental Replicate=2; RAW_FILE_NAME=490_AQ_L1_2_RT.mzML
SUBJECT_SAMPLE_FACTORS           	455	455_AQ_L1_2_CH	Treatment:Anthraquinone | Sample source:Liver | Species:Chinook	Tank Replicate=L1; Experimental Replicate=2; RAW_FILE_NAME=455_AQ_L1_2_CH.mzML
SUBJECT_SAMPLE_FACTORS           	475	475_6Q_L1_3_CO	Treatment:6PPD-quinone | Sample source:Liver | Species:Coho	Tank Replicate=L1; Experimental Replicate=3; RAW_FILE_NAME=475_6Q_L1_3_CO.mzML
SUBJECT_SAMPLE_FACTORS           	476	476_6Q_L1_2_CH	Treatment:6PPD-quinone | Sample source:Liver | Species:Chinook	Tank Replicate=L1; Experimental Replicate=2; RAW_FILE_NAME=476_6Q_L1_2_CH.mzML
#COLLECTION
CO:COLLECTION_SUMMARY            	Fish were sacrificed with MS222 and livers and brains were dissected, weighed,
CO:COLLECTION_SUMMARY            	and flash frozen in aluminum foil packets using liquid nitrogen and stored at
CO:COLLECTION_SUMMARY            	-80
CO:SAMPLE_TYPE                   	Brain, Liver
CO:STORAGE_CONDITIONS            	-80℃
#TREATMENT
TR:TREATMENT_SUMMARY             	Experimental exposures were conducted using a 2/3 static renewal system every
TR:TREATMENT_SUMMARY             	24-hours for a duration of 120-hours. Phase II experimental design included a
TR:TREATMENT_SUMMARY             	120-hour fasted control tank, a 120-hour fed control tank, and four chemical
TR:TREATMENT_SUMMARY             	treatment groups: a 120-hour 1 µg/L 6PPD-q exposure tank, a 120-hour 10 µg/L
TR:TREATMENT_SUMMARY             	AQ exposure tank, a 120-hour both 1 µg/L 6PPD-q and 10 µg/L AQ co-exposure
TR:TREATMENT_SUMMARY             	tank, and a 120-hour 10 µg/L AQ exposure tank combined with the 24-hour
TR:TREATMENT_SUMMARY             	exposure of 1 µg/L 6PPD-q. Each tank included five fish replicates and each
TR:TREATMENT_SUMMARY             	condition was repeated to collect three biological replicates (n = 3)
TR:TREATMENT_COMPOUND            	6PPD-quinone, Anthraquinone
#SAMPLEPREP
SP:SAMPLEPREP_SUMMARY            	Liver and brain tissues were allocated into 10 mg samples using a razor and dry
SP:SAMPLEPREP_SUMMARY            	ice. Samples were aliquoted in Eppendorf vials with 40 µL of 1.4 mm ceramic
SP:SAMPLEPREP_SUMMARY            	beads. Chilled methanol:water, 80:20, was added to the vials (300 µL). Samples
SP:SAMPLEPREP_SUMMARY            	were spiked with 3 µL of isotope labeled metabolite Mix 2 QReSS Kit (Cambridge
SP:SAMPLEPREP_SUMMARY            	Isotope Labs) to account for extraction variability among tissue samples.
SP:SAMPLEPREP_SUMMARY            	Samples were extracted in a Precellys homogenizer (3x15s; 5,500 rpm).
SP:SAMPLEPREP_SUMMARY            	Homogenized tissue (200 µL) was transferred to a clean Eppendorf vial with a
SP:SAMPLEPREP_SUMMARY            	corresponding randomly assigned ID number. Samples were centrifuged at 10,000g
SP:SAMPLEPREP_SUMMARY            	for 3 min at 4 °C. Samples were stored overnight at – 24 °C to precipitated
SP:SAMPLEPREP_SUMMARY            	proteins. Samples were centrifuged again at 13,000g for 15 min at 4 °C.
SP:SAMPLEPREP_SUMMARY            	Supernatant (150 µL) was recovered in a new Eppendorf tube and stored at 4 °C
SP:SAMPLEPREP_SUMMARY            	before LCMS analysis. Samples were spiked with 3 µL of isotope labeled
SP:SAMPLEPREP_SUMMARY            	metabolite Mix 1 QReSS Kit (Cambridge Isotope Labs) to account for instrumental
SP:SAMPLEPREP_SUMMARY            	variation between runs.
#CHROMATOGRAPHY
CH:CHROMATOGRAPHY_TYPE           	Reversed phase
CH:INSTRUMENT_NAME               	Sciex ExionLC AD
CH:COLUMN_NAME                   	GL Sciences Intersil Ph-3 (2.1 x 150 mm, 2um)
CH:SOLVENT_A                     	100% water; 0.1% formic acid
CH:SOLVENT_B                     	100% acetonitrile; 0.1% formic acid
CH:FLOW_GRADIENT                 	In %B, at minute 0, 5% B, and held at 5% B until minute 3. From 3-12 minutes a
CH:FLOW_GRADIENT                 	gradient up to 98% B and held at 98% until 17 minutes. From 17 to 17.5 drop to
CH:FLOW_GRADIENT                 	5% B and held at 5% until 23 minutes.
CH:FLOW_RATE                     	0.3 mL/min
CH:COLUMN_TEMPERATURE            	40
CH:INJECTION_TEMPERATURE         	15
CH:INTERNAL_STANDARD             	QReSS Kit
CH:SAMPLE_INJECTION              	2 uL
#ANALYSIS
AN:ANALYSIS_TYPE                 	MS
#MS
MS:INSTRUMENT_NAME               	ABI Sciex 7600 ZenoTOF
MS:INSTRUMENT_TYPE               	QTOF
MS:MS_TYPE                       	ESI
MS:ION_MODE                      	POSITIVE
MS:MS_COMMENTS                   	MSDIAL peak alignment with in-house IROA library annotations and MSDIAL public
MS:MS_COMMENTS                   	library.
MS:MS_RESULTS_FILE               	ST003296_AN005399_Results.txt	UNITS:abundance	Has m/z:Yes	Has RT:Yes	RT units:Minutes
#END