#METABOLOMICS WORKBENCH Yuanye_Chi_20240709_132111 DATATRACK_ID:4994 STUDY_ID:ST003325 ANALYSIS_ID:AN005445 PROJECT_ID:PR001844 VERSION 1 CREATED_ON July 9, 2024, 1:42 pm #PROJECT PR:PROJECT_TITLE Molecular Phenotypes of Null Alleles in Cells PR:PROJECT_SUMMARY The 2020 NHGRI Strategic Vision laid out a set of “bold predictions for human PR:PROJECT_SUMMARY genomics by 2030” including elucidating the biological function(s) of each PR:PROJECT_SUMMARY human gene. The Molecular Phenotypes of Null Alleles in Cells (MorPhiC) seeks to PR:PROJECT_SUMMARY address this element of the strategic vision. Through the comprehensive PR:PROJECT_SUMMARY generation of null alleles for every human gene and then cataloging the PR:PROJECT_SUMMARY resulting molecular and cellular phenotypes, the mechanisms that relate gene PR:PROJECT_SUMMARY function to observed phenotypes can be determined. Furthermore, the resulting PR:PROJECT_SUMMARY catalog of knockouts and phenotypes will be made available for broader use by PR:PROJECT_SUMMARY the biomedical community. Although multiple approaches can be leveraged to PR:PROJECT_SUMMARY measure molecular and cellular phenotypes resulting from gene knockouts, PR:PROJECT_SUMMARY metabolomics and lipidomics (i.e., biochemical phenotyping) provides an avenue PR:PROJECT_SUMMARY to understand the link between gene function and phenotypes at a molecular PR:PROJECT_SUMMARY level. This project consists of studies performed to biochemical phenotype of PR:PROJECT_SUMMARY cell lines and other samples generated as part of MorPhiC. Resources: 1. PR:PROJECT_SUMMARY https://www.nih.gov/news-events/news-releases/nih-initiative-systematically-investigate-establish-function-every-human-gene PR:PROJECT_SUMMARY 2. PR:PROJECT_SUMMARY https://www.genome.gov/research-funding/Funded-Programs-Projects/Molecular-Phenotypes-of-Null-Alleles-in-Cells PR:INSTITUTE The Jackson Laboratory for Genomic Medicine PR:LABORATORY Shuzhao Li Lab PR:LAST_NAME Chi PR:FIRST_NAME Yuanye PR:ADDRESS 10 Discovery Dr, Farmington, CT PR:EMAIL yuanye.chi@jax.org PR:PHONE 3395456866 #STUDY ST:STUDY_TITLE Comprehensive Untargeted LC-MS Metabolomics Analysis of STS Knockout ST:STUDY_TITLE iPSCs(Supernatant) ST:STUDY_SUMMARY Human induced pluripotent stem cells (hIPSCs) are a key tool for biomedical ST:STUDY_SUMMARY research. In this study, human induced pluripotent stem cells of the KOLF2.2J ST:STUDY_SUMMARY lineage were generated with null allele mutation for STS. Three techniques were ST:STUDY_SUMMARY used for the generation of these KOs and represented in the study metadata as: ST:STUDY_SUMMARY KO – total knockout / gene deletion, PTC – premature stop codon, and CE – ST:STUDY_SUMMARY critical exon deletion. These cell lines were cultured on media with and without ST:STUDY_SUMMARY DHEA-S and were differentiated into primitive syncytium. Biochemical ST:STUDY_SUMMARY phenotyping, i.e., untargeted metabolomics and lipidomics profiling, was ST:STUDY_SUMMARY performed on both differentiated and undifferentiated cells using a Thermo ST:STUDY_SUMMARY Scientific Q Exactive HF-X Mass Spectrometer coupled to a Thermo Scientific ST:STUDY_SUMMARY Transcend LX-2 Duo UHPLC system, equipped with an HES-II ionization source, ST:STUDY_SUMMARY using both positive andnegative ionization modes. Additionally, in this dataset, ST:STUDY_SUMMARY chemoselective derivatization was also performed on cell pellets and supernatant ST:STUDY_SUMMARY using Dansyl Hydrazine and Dansyl Chloride (DnHz and DnCl) using an in house ST:STUDY_SUMMARY method in which most samples are derivatized using unlabeled reagent while a ST:STUDY_SUMMARY subset of pooled samples are derivatized using a roughly 50:50 mixture of ST:STUDY_SUMMARY labelled (m+13C2) and unlabeled reagent. The exact ratios can be inferred from ST:STUDY_SUMMARY our analysis of the reagent mixture using either direct injection or LC-MS. ST:STUDY_SUMMARY These samples were run at a different resolution than the rest of the samples ST:STUDY_SUMMARY and thus not included in the uploaded feature tables. This dataset, combined ST:STUDY_SUMMARY with the other -omics level data generated through MorPhiC on these cell lines, ST:STUDY_SUMMARY provides a molecular foundation for understanding the implications of specific ST:STUDY_SUMMARY gene deletions in these cell lines and their derivative cell types (e.g., ST:STUDY_SUMMARY primitive syncytium). This study includes data generated from the cell pellets ST:STUDY_SUMMARY of the above cell lines. This study was funded, in part, through UM1HG012651 ST:STUDY_SUMMARY which established the JAX MorPhiC Center, a MorPhiC Phase 1 Data Production ST:STUDY_SUMMARY Research and Development Center at the Jackson Laboratory for Genomic Medicine. ST:INSTITUTE The Jackson Laboratory for Genomic Medicine ST:LAST_NAME Chi ST:FIRST_NAME Yuanye ST:ADDRESS 10 Discovery Dr, Farmington, CT ST:EMAIL yuanye.chi@jax.org ST:PHONE 3395456866 #SUBJECT SU:SUBJECT_TYPE Cultured cells SU:SUBJECT_SPECIES Homo sapiens SU:TAXONOMY_ID 9606 #FACTORS #SUBJECT_SAMPLE_FACTORS: SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Raw file names and additional sample data SUBJECT_SAMPLE_FACTORS - DnCl_C12C13_mixratio_240K_LC_MS_1 Sample source:Reagent_Mixture_LC_MS_240K_res | GROUP:- RAW_FILE_NAME(Raw file name)=DnCl_C12C13_mixratio_240K_LC_MS_1.mzML SUBJECT_SAMPLE_FACTORS - DnCl_C12C13_mixratio_240K_LC_MS_2 Sample source:Reagent_Mixture_LC_MS_240K_res | GROUP:- RAW_FILE_NAME(Raw file name)=DnCl_C12C13_mixratio_240K_LC_MS_2.mzML SUBJECT_SAMPLE_FACTORS - DnCl_C12C13_mixratio_240K_LC_MS_3 Sample source:Reagent_Mixture_LC_MS_240K_res | GROUP:- RAW_FILE_NAME(Raw file name)=DnCl_C12C13_mixratio_240K_LC_MS_3.mzML SUBJECT_SAMPLE_FACTORS - 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STS_supernatant_KO_A02_plate_4_12C_DnCl_04252024_SZ_60 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A02_plate_4_12C_DnCl_04252024_SZ_60.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_G09_plate_1_12C_DnCl_04252024_SZ_61 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_G09_plate_1_12C_DnCl_04252024_SZ_61.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_B08_plate_4_12C_DnCl_04252024_SZ_62 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_B08_plate_4_12C_DnCl_04252024_SZ_62.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_A01_plate_1_12C_DnCl_04252024_SZ_63 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A01_plate_1_12C_DnCl_04252024_SZ_63.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_A07_plate_2_12C_DnCl_04252024_SZ_64 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_A07_plate_2_12C_DnCl_04252024_SZ_64.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_A02_plate_6_12C_DnCl_04252024_SZ_65 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A02_plate_6_12C_DnCl_04252024_SZ_65.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C_DnCl_biologicalreplicate_2_analyticalreplicate_2_04252024_SZ_66 Sample source:12C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C_DnCl_biologicalreplicate_2_analyticalreplicate_2_04252024_SZ_66.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C13C_DnCl_biologicalreplicate_2_analyticalreplicate_2_04252024_SZ_67 Sample source:12C13C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C13C_DnCl_biologicalreplicate_2_analyticalreplicate_2_04252024_SZ_67.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C_DnCl_biologicalreplicate_2_analyticalreplicate_2_04252024_SZ_68 Sample source:12C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C_DnCl_biologicalreplicate_2_analyticalreplicate_2_04252024_SZ_68.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C13C_DnCl_biologicalreplicate_2_analyticalreplicate_2_04252024_SZ_69 Sample source:12C13C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C13C_DnCl_biologicalreplicate_2_analyticalreplicate_2_04252024_SZ_69.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_3_plate_4_12C_DnCl_04252024_SZ_70 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_3_plate_4_12C_DnCl_04252024_SZ_70.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_B01_plate_5_12C_DnCl_04252024_SZ_71 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_B01_plate_5_12C_DnCl_04252024_SZ_71.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_3_plate_5_12C_DnCl_04252024_SZ_72 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_3_plate_5_12C_DnCl_04252024_SZ_72.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_B01_plate_6_12C_DnCl_04252024_SZ_73 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_B01_plate_6_12C_DnCl_04252024_SZ_73.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_D10_plate_2_12C_DnCl_04252024_SZ_74 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_D10_plate_2_12C_DnCl_04252024_SZ_74.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_A06_plate_1_12C_DnCl_04252024_SZ_75 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_A06_plate_1_12C_DnCl_04252024_SZ_75.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_3_plate_1_12C_DnCl_04252024_SZ_76 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_3_plate_1_12C_DnCl_04252024_SZ_76.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_A02_plate_5_12C_DnCl_04252024_SZ_77 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A02_plate_5_12C_DnCl_04252024_SZ_77.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C_DnCl_biologicalreplicate_2_analyticalreplicate_3_04252024_SZ_78 Sample source:12C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C_DnCl_biologicalreplicate_2_analyticalreplicate_3_04252024_SZ_78.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C13C_DnCl_biologicalreplicate_2_analyticalreplicate_3_04252024_SZ_79 Sample source:12C13C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C13C_DnCl_biologicalreplicate_2_analyticalreplicate_3_04252024_SZ_79.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C_DnCl_biologicalreplicate_2_analyticalreplicate_3_04252024_SZ_80 Sample source:12C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C_DnCl_biologicalreplicate_2_analyticalreplicate_3_04252024_SZ_80.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C13C_DnCl_biologicalreplicate_2_analyticalreplicate_3_04252024_SZ_81 Sample source:12C13C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C13C_DnCl_biologicalreplicate_2_analyticalreplicate_3_04252024_SZ_81.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_3_plate_3_12C_DnCl_04252024_SZ_82 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_3_plate_3_12C_DnCl_04252024_SZ_82.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_A07_plate_5_12C_DnCl_04252024_SZ_83 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_A07_plate_5_12C_DnCl_04252024_SZ_83.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_D10_plate_4_12C_DnCl_04252024_SZ_84 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_D10_plate_4_12C_DnCl_04252024_SZ_84.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_B01_plate_2_12C_DnCl_04252024_SZ_85 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_B01_plate_2_12C_DnCl_04252024_SZ_85.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_2_plate_3_12C_DnCl_04252024_SZ_86 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_2_plate_3_12C_DnCl_04252024_SZ_86.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_F10_plate_1_12C_DnCl_04252024_SZ_87 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_F10_plate_1_12C_DnCl_04252024_SZ_87.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_1_plate_4_12C_DnCl_04252024_SZ_88 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_1_plate_4_12C_DnCl_04252024_SZ_88.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_F10_plate_2_12C_DnCl_04252024_SZ_89 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_F10_plate_2_12C_DnCl_04252024_SZ_89.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C_DnCl_biologicalreplicate_1_analyticalreplicate_3_04252024_SZ_90 Sample source:12C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C_DnCl_biologicalreplicate_1_analyticalreplicate_3_04252024_SZ_90.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C13C_DnCl_biologicalreplicate_1_analyticalreplicate_3_04252024_SZ_91 Sample source:12C13C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C13C_DnCl_biologicalreplicate_1_analyticalreplicate_3_04252024_SZ_91.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C_DnCl_biologicalreplicate_1_analyticalreplicate_3_04252024_SZ_92 Sample source:12C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C_DnCl_biologicalreplicate_1_analyticalreplicate_3_04252024_SZ_92.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C13C_DnCl_biologicalreplicate_1_analyticalreplicate_3_04252024_SZ_93 Sample source:12C13C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C13C_DnCl_biologicalreplicate_1_analyticalreplicate_3_04252024_SZ_93.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_B08_plate_5_12C_DnCl_04252024_SZ_94 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_B08_plate_5_12C_DnCl_04252024_SZ_94.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_A06_plate_2_12C_DnCl_04252024_SZ_95 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_A06_plate_2_12C_DnCl_04252024_SZ_95.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_A01_plate_4_12C_DnCl_04252024_SZ_96 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A01_plate_4_12C_DnCl_04252024_SZ_96.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_A07_plate_3_12C_DnCl_04252024_SZ_97 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_A07_plate_3_12C_DnCl_04252024_SZ_97.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_F10_plate_5_12C_DnCl_04252024_SZ_98 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_F10_plate_5_12C_DnCl_04252024_SZ_98.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_A02_plate_2_12C_DnCl_04252024_SZ_99 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A02_plate_2_12C_DnCl_04252024_SZ_99.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_A01_plate_2_12C_DnCl_04252024_SZ_100 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A01_plate_2_12C_DnCl_04252024_SZ_100.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_G09_plate_2_12C_DnCl_04252024_SZ_101 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_G09_plate_2_12C_DnCl_04252024_SZ_101.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C_DnCl_biologicalreplicate_3_analyticalreplicate_3_04252024_SZ_102 Sample source:12C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C_DnCl_biologicalreplicate_3_analyticalreplicate_3_04252024_SZ_102.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C13C_DnCl_biologicalreplicate_3_analyticalreplicate_3_04252024_SZ_103 Sample source:12C13C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C13C_DnCl_biologicalreplicate_3_analyticalreplicate_3_04252024_SZ_103.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C_DnCl_biologicalreplicate_3_analyticalreplicate_3_04252024_SZ_104 Sample source:12C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C_DnCl_biologicalreplicate_3_analyticalreplicate_3_04252024_SZ_104.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C13C_DnCl_biologicalreplicate_3_analyticalreplicate_3_04252024_SZ_105 Sample source:12C13C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C13C_DnCl_biologicalreplicate_3_analyticalreplicate_3_04252024_SZ_105.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_3_plate_2_12C_DnCl_04252024_SZ_106 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_3_plate_2_12C_DnCl_04252024_SZ_106.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_1_plate_6_12C_DnCl_04252024_SZ_107 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_1_plate_6_12C_DnCl_04252024_SZ_107.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_1_plate_3_12C_DnCl_04252024_SZ_108 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_1_plate_3_12C_DnCl_04252024_SZ_108.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_B08_plate_6_12C_DnCl_04252024_SZ_109 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_B08_plate_6_12C_DnCl_04252024_SZ_109.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_D10_plate_5_12C_DnCl_04252024_SZ_110 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_D10_plate_5_12C_DnCl_04252024_SZ_110.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_B01_plate_4_12C_DnCl_04252024_SZ_111 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_B01_plate_4_12C_DnCl_04252024_SZ_111.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_A06_plate_3_12C_DnCl_04252024_SZ_112 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_A06_plate_3_12C_DnCl_04252024_SZ_112.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_G09_plate_5_12C_DnCl_04252024_SZ_113 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_G09_plate_5_12C_DnCl_04252024_SZ_113.mzML SUBJECT_SAMPLE_FACTORS - Qstd_2_04252024_SZ_114 Sample source:Qstd | GROUP:- RAW_FILE_NAME(Raw file name)=Qstd_2_04252024_SZ_114.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Process_Blank_1213C_DnCl_2_04252024_SZ_115 Sample source:12C13C_Derivatized_Process_Blank | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Process_Blank_1213C_DnCl_2_04252024_SZ_115.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Process_Blank_12C_DnCl_2_04252024_SZ_116 Sample source:12C_Derivatized_Process_Blank | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Process_Blank_12C_DnCl_2_04252024_SZ_116.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_non_derivatizationreagent_DnCl_2_04252024_SZ_117 Sample source:Underivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_non_derivatizationreagent_DnCl_2_04252024_SZ_117.mzML SUBJECT_SAMPLE_FACTORS - Solvent_Blank_2_04252024_SZ_118 Sample source:Solvent_Blank | GROUP:- RAW_FILE_NAME(Raw file name)=Solvent_Blank_2_04252024_SZ_118.mzML SUBJECT_SAMPLE_FACTORS - DnHz_C12C13_mixratio_240K_LC_MS_1 Sample source:Reagent_Mixture_LC_MS_240K_res | GROUP:- RAW_FILE_NAME(Raw file name)=DnHz_C12C13_mixratio_240K_LC_MS_1.mzML SUBJECT_SAMPLE_FACTORS - DnHz_C12C13_mixratio_240K_LC_MS_2 Sample source:Reagent_Mixture_LC_MS_240K_res | GROUP:- RAW_FILE_NAME(Raw file name)=DnHz_C12C13_mixratio_240K_LC_MS_2.mzML SUBJECT_SAMPLE_FACTORS - DnHz_C12C13_mixratio_240K_LC_MS_3 Sample source:Reagent_Mixture_LC_MS_240K_res | GROUP:- RAW_FILE_NAME(Raw file name)=DnHz_C12C13_mixratio_240K_LC_MS_3.mzML SUBJECT_SAMPLE_FACTORS - Solvent_Blank_1_05012024_SZ_01 Sample source:Solvent_Blank | GROUP:- RAW_FILE_NAME(Raw file name)=Solvent_Blank_1_05012024_SZ_01.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_non_derivatizationreagent_DnHz_1_05012024_SZ_02 Sample source:Underivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_non_derivatizationreagent_DnHz_1_05012024_SZ_02.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Process_Blank_12C_DnHz_1_05012024_SZ_03 Sample source:12C_Derivatized_Process_Blank | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Process_Blank_12C_DnHz_1_05012024_SZ_03.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Process_Blank_1213C_DnHz_1_05012024_SZ_04 Sample source:12C13C_Derivatized_Process_Blank | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Process_Blank_1213C_DnHz_1_05012024_SZ_04.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C_DnHz_biologicalreplicate_3_analyticalreplicate_1_05012024_SZ_05 Sample source:12C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C_DnHz_biologicalreplicate_3_analyticalreplicate_1_05012024_SZ_05.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C13C_DnHz_biologicalreplicate_3_analyticalreplicate_1_05012024_SZ_06 Sample source:12C13C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C13C_DnHz_biologicalreplicate_3_analyticalreplicate_1_05012024_SZ_06.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C_DnHz_biologicalreplicate_3_analyticalreplicate_1_05012024_SZ_07 Sample source:12C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C_DnHz_biologicalreplicate_3_analyticalreplicate_1_05012024_SZ_07.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C13C_DnHz_biologicalreplicate_3_analyticalreplicate_1_05012024_SZ_08 Sample source:12C13C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C13C_DnHz_biologicalreplicate_3_analyticalreplicate_1_05012024_SZ_08.mzML SUBJECT_SAMPLE_FACTORS - Qstd_1_05012024_SZ_09 Sample source:Qstd | GROUP:- RAW_FILE_NAME(Raw file name)=Qstd_1_05012024_SZ_09.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_2_plate_1_12C_DnHz_05012024_SZ_10 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_2_plate_1_12C_DnHz_05012024_SZ_10.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_1_plate_1_12C_DnHz_05012024_SZ_11 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_1_plate_1_12C_DnHz_05012024_SZ_11.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_G09_plate_1_12C_DnHz_05012024_SZ_12 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_G09_plate_1_12C_DnHz_05012024_SZ_12.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_A07_plate_6_12C_DnHz_05012024_SZ_13 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_A07_plate_6_12C_DnHz_05012024_SZ_13.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_D10_plate_6_12C_DnHz_05012024_SZ_14 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_D10_plate_6_12C_DnHz_05012024_SZ_14.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_A02_plate_2_12C_DnHz_05012024_SZ_15 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A02_plate_2_12C_DnHz_05012024_SZ_15.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_A06_plate_4_12C_DnHz_05012024_SZ_16 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_A06_plate_4_12C_DnHz_05012024_SZ_16.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_B01_plate_3_12C_DnHz_05012024_SZ_17 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_B01_plate_3_12C_DnHz_05012024_SZ_17.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C_DnHz_biologicalreplicate_1_analyticalreplicate_1_05012024_SZ_18 Sample source:12C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C_DnHz_biologicalreplicate_1_analyticalreplicate_1_05012024_SZ_18.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C13C_DnHz_biologicalreplicate_1_analyticalreplicate_1_05012024_SZ_19 Sample source:12C13C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C13C_DnHz_biologicalreplicate_1_analyticalreplicate_1_05012024_SZ_19.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C_DnHz_biologicalreplicate_1_analyticalreplicate_1_05012024_SZ_20 Sample source:12C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C_DnHz_biologicalreplicate_1_analyticalreplicate_1_05012024_SZ_20.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C13C_DnHz_biologicalreplicate_1_analyticalreplicate_1_05012024_SZ_21 Sample source:12C13C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C13C_DnHz_biologicalreplicate_1_analyticalreplicate_1_05012024_SZ_21.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_F10_plate_4_12C_DnHz_05012024_SZ_22 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_F10_plate_4_12C_DnHz_05012024_SZ_22.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_B08_plate_2_12C_DnHz_05012024_SZ_23 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_B08_plate_2_12C_DnHz_05012024_SZ_23.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_A01_plate_4_12C_DnHz_05012024_SZ_24 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A01_plate_4_12C_DnHz_05012024_SZ_24.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_3_plate_5_12C_DnHz_05012024_SZ_25 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_3_plate_5_12C_DnHz_05012024_SZ_25.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_B01_plate_6_12C_DnHz_05012024_SZ_26 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_B01_plate_6_12C_DnHz_05012024_SZ_26.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_2_plate_3_12C_DnHz_05012024_SZ_27 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_2_plate_3_12C_DnHz_05012024_SZ_27.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_A06_plate_6_12C_DnHz_05012024_SZ_28 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_A06_plate_6_12C_DnHz_05012024_SZ_28.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_2_plate_5_12C_DnHz_05012024_SZ_29 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_2_plate_5_12C_DnHz_05012024_SZ_29.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C_DnHz_biologicalreplicate_2_analyticalreplicate_1_05012024_SZ_30 Sample source:12C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C_DnHz_biologicalreplicate_2_analyticalreplicate_1_05012024_SZ_30.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C13C_DnHz_biologicalreplicate_2_analyticalreplicate_1_05012024_SZ_31 Sample source:12C13C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C13C_DnHz_biologicalreplicate_2_analyticalreplicate_1_05012024_SZ_31.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C_DnHz_biologicalreplicate_2_analyticalreplicate_1_05012024_SZ_32 Sample source:12C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C_DnHz_biologicalreplicate_2_analyticalreplicate_1_05012024_SZ_32.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C13C_DnHz_biologicalreplicate_2_analyticalreplicate_1_05012024_SZ_33 Sample source:12C13C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C13C_DnHz_biologicalreplicate_2_analyticalreplicate_1_05012024_SZ_33.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_A01_plate_3_12C_DnHz_05012024_SZ_34 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A01_plate_3_12C_DnHz_05012024_SZ_34.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_A07_plate_4_12C_DnHz_05012024_SZ_35 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_A07_plate_4_12C_DnHz_05012024_SZ_35.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_A02_plate_3_12C_DnHz_05012024_SZ_36 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A02_plate_3_12C_DnHz_05012024_SZ_36.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_F10_plate_6_12C_DnHz_05012024_SZ_37 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_F10_plate_6_12C_DnHz_05012024_SZ_37.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_G09_plate_2_12C_DnHz_05012024_SZ_38 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_G09_plate_2_12C_DnHz_05012024_SZ_38.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_B08_plate_6_12C_DnHz_05012024_SZ_39 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_B08_plate_6_12C_DnHz_05012024_SZ_39.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_1_plate_3_12C_DnHz_05012024_SZ_40 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_1_plate_3_12C_DnHz_05012024_SZ_40.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_D10_plate_1_12C_DnHz_05012024_SZ_41 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_D10_plate_1_12C_DnHz_05012024_SZ_41.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C_DnHz_biologicalreplicate_1_analyticalreplicate_2_05012024_SZ_42 Sample source:12C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C_DnHz_biologicalreplicate_1_analyticalreplicate_2_05012024_SZ_42.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C13C_DnHz_biologicalreplicate_1_analyticalreplicate_2_05012024_SZ_43 Sample source:12C13C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C13C_DnHz_biologicalreplicate_1_analyticalreplicate_2_05012024_SZ_43.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C_DnHz_biologicalreplicate_1_analyticalreplicate_2_05012024_SZ_44 Sample source:12C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C_DnHz_biologicalreplicate_1_analyticalreplicate_2_05012024_SZ_44.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C13C_DnHz_biologicalreplicate_1_analyticalreplicate_2_05012024_SZ_45 Sample source:12C13C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C13C_DnHz_biologicalreplicate_1_analyticalreplicate_2_05012024_SZ_45.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_D10_plate_2_12C_DnHz_05012024_SZ_46 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_D10_plate_2_12C_DnHz_05012024_SZ_46.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_3_plate_1_12C_DnHz_05012024_SZ_47 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_3_plate_1_12C_DnHz_05012024_SZ_47.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_B08_plate_1_12C_DnHz_05012024_SZ_48 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_B08_plate_1_12C_DnHz_05012024_SZ_48.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_A02_plate_5_12C_DnHz_05012024_SZ_49 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A02_plate_5_12C_DnHz_05012024_SZ_49.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_A06_plate_5_12C_DnHz_05012024_SZ_50 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_A06_plate_5_12C_DnHz_05012024_SZ_50.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_2_plate_6_12C_DnHz_05012024_SZ_51 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_2_plate_6_12C_DnHz_05012024_SZ_51.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_G09_plate_4_12C_DnHz_05012024_SZ_52 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_G09_plate_4_12C_DnHz_05012024_SZ_52.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_A07_plate_3_12C_DnHz_05012024_SZ_53 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_A07_plate_3_12C_DnHz_05012024_SZ_53.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C_DnHz_biologicalreplicate_3_analyticalreplicate_2_05012024_SZ_54 Sample source:12C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C_DnHz_biologicalreplicate_3_analyticalreplicate_2_05012024_SZ_54.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C13C_DnHz_biologicalreplicate_3_analyticalreplicate_2_05012024_SZ_55 Sample source:12C13C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C13C_DnHz_biologicalreplicate_3_analyticalreplicate_2_05012024_SZ_55.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C_DnHz_biologicalreplicate_3_analyticalreplicate_2_05012024_SZ_56 Sample source:12C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C_DnHz_biologicalreplicate_3_analyticalreplicate_2_05012024_SZ_56.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C13C_DnHz_biologicalreplicate_3_analyticalreplicate_2_05012024_SZ_57 Sample source:12C13C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C13C_DnHz_biologicalreplicate_3_analyticalreplicate_2_05012024_SZ_57.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_3_plate_2_12C_DnHz_05012024_SZ_58 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_3_plate_2_12C_DnHz_05012024_SZ_58.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_B01_plate_1_12C_DnHz_05012024_SZ_59 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_B01_plate_1_12C_DnHz_05012024_SZ_59.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_A01_plate_5_12C_DnHz_05012024_SZ_60 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A01_plate_5_12C_DnHz_05012024_SZ_60.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_F10_plate_5_12C_DnHz_05012024_SZ_61 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_F10_plate_5_12C_DnHz_05012024_SZ_61.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_A01_plate_1_12C_DnHz_05012024_SZ_62 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A01_plate_1_12C_DnHz_05012024_SZ_62.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_D10_plate_4_12C_DnHz_05012024_SZ_63 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_D10_plate_4_12C_DnHz_05012024_SZ_63.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_A07_plate_5_12C_DnHz_05012024_SZ_64 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_A07_plate_5_12C_DnHz_05012024_SZ_64.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_B08_plate_5_12C_DnHz_05012024_SZ_65 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_B08_plate_5_12C_DnHz_05012024_SZ_65.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C_DnHz_biologicalreplicate_2_analyticalreplicate_2_05012024_SZ_66 Sample source:12C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C_DnHz_biologicalreplicate_2_analyticalreplicate_2_05012024_SZ_66.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C13C_DnHz_biologicalreplicate_2_analyticalreplicate_2_05012024_SZ_67 Sample source:12C13C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C13C_DnHz_biologicalreplicate_2_analyticalreplicate_2_05012024_SZ_67.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C_DnHz_biologicalreplicate_2_analyticalreplicate_2_05012024_SZ_68 Sample source:12C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C_DnHz_biologicalreplicate_2_analyticalreplicate_2_05012024_SZ_68.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C13C_DnHz_biologicalreplicate_2_analyticalreplicate_2_05012024_SZ_69 Sample source:12C13C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C13C_DnHz_biologicalreplicate_2_analyticalreplicate_2_05012024_SZ_69.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_G09_plate_3_12C_DnHz_05012024_SZ_70 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_G09_plate_3_12C_DnHz_05012024_SZ_70.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_3_plate_4_12C_DnHz_05012024_SZ_71 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_3_plate_4_12C_DnHz_05012024_SZ_71.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_1_plate_2_12C_DnHz_05012024_SZ_72 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_1_plate_2_12C_DnHz_05012024_SZ_72.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_A02_plate_1_12C_DnHz_05012024_SZ_73 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A02_plate_1_12C_DnHz_05012024_SZ_73.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_1_plate_6_12C_DnHz_05012024_SZ_74 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_1_plate_6_12C_DnHz_05012024_SZ_74.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_A06_plate_3_12C_DnHz_05012024_SZ_75 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_A06_plate_3_12C_DnHz_05012024_SZ_75.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_F10_plate_2_12C_DnHz_05012024_SZ_76 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_F10_plate_2_12C_DnHz_05012024_SZ_76.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_B01_plate_4_12C_DnHz_05012024_SZ_77 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_B01_plate_4_12C_DnHz_05012024_SZ_77.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C_DnHz_biologicalreplicate_2_analyticalreplicate_3_05012024_SZ_78 Sample source:12C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C_DnHz_biologicalreplicate_2_analyticalreplicate_3_05012024_SZ_78.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C13C_DnHz_biologicalreplicate_2_analyticalreplicate_3_05012024_SZ_79 Sample source:12C13C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C13C_DnHz_biologicalreplicate_2_analyticalreplicate_3_05012024_SZ_79.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C_DnHz_biologicalreplicate_2_analyticalreplicate_3_05012024_SZ_80 Sample source:12C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C_DnHz_biologicalreplicate_2_analyticalreplicate_3_05012024_SZ_80.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C13C_DnHz_biologicalreplicate_2_analyticalreplicate_3_05012024_SZ_81 Sample source:12C13C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C13C_DnHz_biologicalreplicate_2_analyticalreplicate_3_05012024_SZ_81.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_F10_plate_3_12C_DnHz_05012024_SZ_82 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_F10_plate_3_12C_DnHz_05012024_SZ_82.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_A02_plate_4_12C_DnHz_05012024_SZ_83 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A02_plate_4_12C_DnHz_05012024_SZ_83.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_A01_plate_2_12C_DnHz_05012024_SZ_84 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A01_plate_2_12C_DnHz_05012024_SZ_84.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_A06_plate_2_12C_DnHz_05012024_SZ_85 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_A06_plate_2_12C_DnHz_05012024_SZ_85.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_B08_plate_4_12C_DnHz_05012024_SZ_86 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_B08_plate_4_12C_DnHz_05012024_SZ_86.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_2_plate_4_12C_DnHz_05012024_SZ_87 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_2_plate_4_12C_DnHz_05012024_SZ_87.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_G09_plate_5_12C_DnHz_05012024_SZ_88 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_G09_plate_5_12C_DnHz_05012024_SZ_88.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_2_plate_2_12C_DnHz_05012024_SZ_89 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_2_plate_2_12C_DnHz_05012024_SZ_89.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C_DnHz_biologicalreplicate_1_analyticalreplicate_3_05012024_SZ_90 Sample source:12C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C_DnHz_biologicalreplicate_1_analyticalreplicate_3_05012024_SZ_90.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C13C_DnHz_biologicalreplicate_1_analyticalreplicate_3_05012024_SZ_91 Sample source:12C13C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C13C_DnHz_biologicalreplicate_1_analyticalreplicate_3_05012024_SZ_91.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C_DnHz_biologicalreplicate_1_analyticalreplicate_3_05012024_SZ_92 Sample source:12C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C_DnHz_biologicalreplicate_1_analyticalreplicate_3_05012024_SZ_92.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C13C_DnHz_biologicalreplicate_1_analyticalreplicate_3_05012024_SZ_93 Sample source:12C13C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C13C_DnHz_biologicalreplicate_1_analyticalreplicate_3_05012024_SZ_93.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_A07_plate_1_12C_DnHz_05012024_SZ_94 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_A07_plate_1_12C_DnHz_05012024_SZ_94.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_3_plate_6_12C_DnHz_05012024_SZ_95 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_3_plate_6_12C_DnHz_05012024_SZ_95.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_D10_plate_5_12C_DnHz_05012024_SZ_96 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_D10_plate_5_12C_DnHz_05012024_SZ_96.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_B01_plate_2_12C_DnHz_05012024_SZ_97 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_B01_plate_2_12C_DnHz_05012024_SZ_97.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_A02_plate_6_12C_DnHz_05012024_SZ_98 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A02_plate_6_12C_DnHz_05012024_SZ_98.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_G09_plate_6_12C_DnHz_05012024_SZ_99 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_G09_plate_6_12C_DnHz_05012024_SZ_99.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_A06_plate_1_12C_DnHz_05012024_SZ_100 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_A06_plate_1_12C_DnHz_05012024_SZ_100.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_1_plate_4_12C_DnHz_05012024_SZ_101 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_1_plate_4_12C_DnHz_05012024_SZ_101.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C_DnHz_biologicalreplicate_3_analyticalreplicate_3_05012024_SZ_102 Sample source:12C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C_DnHz_biologicalreplicate_3_analyticalreplicate_3_05012024_SZ_102.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Standards_12C13C_DnHz_biologicalreplicate_3_analyticalreplicate_3_05012024_SZ_103 Sample source:12C13C_Derivatized_Standards | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Standards_12C13C_DnHz_biologicalreplicate_3_analyticalreplicate_3_05012024_SZ_103.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C_DnHz_biologicalreplicate_3_analyticalreplicate_3_05012024_SZ_104 Sample source:12C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C_DnHz_biologicalreplicate_3_analyticalreplicate_3_05012024_SZ_104.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_12C13C_DnHz_biologicalreplicate_3_analyticalreplicate_3_05012024_SZ_105 Sample source:12C13C_Derivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_12C13C_DnHz_biologicalreplicate_3_analyticalreplicate_3_05012024_SZ_105.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_F10_plate_1_12C_DnHz_05012024_SZ_106 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_F10_plate_1_12C_DnHz_05012024_SZ_106.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_A01_plate_6_12C_DnHz_05012024_SZ_107 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_A01_plate_6_12C_DnHz_05012024_SZ_107.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_PTC_D10_plate_3_12C_DnHz_05012024_SZ_108 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_PTC_D10_plate_3_12C_DnHz_05012024_SZ_108.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_1_plate_5_12C_DnHz_05012024_SZ_109 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_1_plate_5_12C_DnHz_05012024_SZ_109.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_B08_plate_3_12C_DnHz_05012024_SZ_110 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_B08_plate_3_12C_DnHz_05012024_SZ_110.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_WT_3_plate_3_12C_DnHz_05012024_SZ_111 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_WT_3_plate_3_12C_DnHz_05012024_SZ_111.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_KO_B01_plate_5_12C_DnHz_05012024_SZ_112 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=STS_supernatant_KO_B01_plate_5_12C_DnHz_05012024_SZ_112.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_CE_A07_plate_2_12C_DnHz_05012024_SZ_113 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=STS_supernatant_CE_A07_plate_2_12C_DnHz_05012024_SZ_113.mzML SUBJECT_SAMPLE_FACTORS - Qstd_2_05012024_SZ_114 Sample source:Qstd | GROUP:- RAW_FILE_NAME(Raw file name)=Qstd_2_05012024_SZ_114.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Process_Blank_1213C_DnHz_2_05012024_SZ_115 Sample source:12C13C_Derivatized_Process_Blank | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Process_Blank_1213C_DnHz_2_05012024_SZ_115.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Process_Blank_12C_DnHz_2_05012024_SZ_116 Sample source:12C_Derivatized_Process_Blank | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Process_Blank_12C_DnHz_2_05012024_SZ_116.mzML SUBJECT_SAMPLE_FACTORS - STS_supernatant_Pool_QC_non_derivatizationreagent_DnHz_2_05012024_SZ_117 Sample source:Underivatized_Pool | GROUP:- RAW_FILE_NAME(Raw file name)=STS_supernatant_Pool_QC_non_derivatizationreagent_DnHz_2_05012024_SZ_117.mzML SUBJECT_SAMPLE_FACTORS - Solvent_Blank_2_05012024_SZ_118 Sample source:Solvent_Blank | GROUP:- RAW_FILE_NAME(Raw file name)=Solvent_Blank_2_05012024_SZ_118.mzML SUBJECT_SAMPLE_FACTORS - Solvent_Blank_HILICneg_1_supernatant_SZ_04262024_01 Sample source:Solvent_Blank | GROUP:- RAW_FILE_NAME(Raw file name)=Solvent_Blank_HILICneg_1_supernatant_SZ_04262024_01.mzML SUBJECT_SAMPLE_FACTORS - Process_Blank_HILICneg_1_supernatant_SZ_04262024_03 Sample source:Process_Blank | GROUP:- RAW_FILE_NAME(Raw file name)=Process_Blank_HILICneg_1_supernatant_SZ_04262024_03.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_HILICneg_1_supernatant_SZ_04262024_05 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_HILICneg_1_supernatant_SZ_04262024_05.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_DDA_HILICneg_1_supernatant_SZ_04262024_07 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_DDA_HILICneg_1_supernatant_SZ_04262024_07.mzML SUBJECT_SAMPLE_FACTORS - Qstd_HILICneg_1_supernatant_SZ_04262024_09 Sample source:Qstd | GROUP:- RAW_FILE_NAME(Raw file name)=Qstd_HILICneg_1_supernatant_SZ_04262024_09.mzML SUBJECT_SAMPLE_FACTORS - WT_3_plate_2_HILICneg_supernatant_SZ_04262024_11 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=WT_3_plate_2_HILICneg_supernatant_SZ_04262024_11.mzML SUBJECT_SAMPLE_FACTORS - KO_A01_plate_2_HILICneg_supernatant_SZ_04262024_13 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=KO_A01_plate_2_HILICneg_supernatant_SZ_04262024_13.mzML SUBJECT_SAMPLE_FACTORS - CE_A07_plate_5_HILICneg_supernatant_SZ_04262024_15 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=CE_A07_plate_5_HILICneg_supernatant_SZ_04262024_15.mzML SUBJECT_SAMPLE_FACTORS - KO_A02_plate_2_HILICneg_supernatant_SZ_04262024_17 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=KO_A02_plate_2_HILICneg_supernatant_SZ_04262024_17.mzML SUBJECT_SAMPLE_FACTORS - CE_A06_plate_6_HILICneg_supernatant_SZ_04262024_19 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=CE_A06_plate_6_HILICneg_supernatant_SZ_04262024_19.mzML SUBJECT_SAMPLE_FACTORS - WT_1_plate_3_HILICneg_supernatant_SZ_04262024_21 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=WT_1_plate_3_HILICneg_supernatant_SZ_04262024_21.mzML SUBJECT_SAMPLE_FACTORS - PTC_G09_plate_5_HILICneg_supernatant_SZ_04262024_23 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=PTC_G09_plate_5_HILICneg_supernatant_SZ_04262024_23.mzML SUBJECT_SAMPLE_FACTORS - PTC_F10_plate_1_HILICneg_supernatant_SZ_04262024_25 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=PTC_F10_plate_1_HILICneg_supernatant_SZ_04262024_25.mzML SUBJECT_SAMPLE_FACTORS - CE_B08_plate_5_HILICneg_supernatant_SZ_04262024_27 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=CE_B08_plate_5_HILICneg_supernatant_SZ_04262024_27.mzML SUBJECT_SAMPLE_FACTORS - PTC_D10_plate_1_HILICneg_supernatant_SZ_04262024_29 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=PTC_D10_plate_1_HILICneg_supernatant_SZ_04262024_29.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_HILICneg_2_supernatant_SZ_04262024_31 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_HILICneg_2_supernatant_SZ_04262024_31.mzML SUBJECT_SAMPLE_FACTORS - KO_B01_plate_6_HILICneg_supernatant_SZ_04262024_33 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=KO_B01_plate_6_HILICneg_supernatant_SZ_04262024_33.mzML SUBJECT_SAMPLE_FACTORS - WT_1_plate_5_HILICneg_supernatant_SZ_04262024_35 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=WT_1_plate_5_HILICneg_supernatant_SZ_04262024_35.mzML SUBJECT_SAMPLE_FACTORS - PTC_F10_plate_4_HILICneg_supernatant_SZ_04262024_37 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=PTC_F10_plate_4_HILICneg_supernatant_SZ_04262024_37.mzML SUBJECT_SAMPLE_FACTORS - CE_A07_plate_3_HILICneg_supernatant_SZ_04262024_39 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=CE_A07_plate_3_HILICneg_supernatant_SZ_04262024_39.mzML SUBJECT_SAMPLE_FACTORS - KO_B01_plate_2_HILICneg_supernatant_SZ_04262024_41 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=KO_B01_plate_2_HILICneg_supernatant_SZ_04262024_41.mzML SUBJECT_SAMPLE_FACTORS - KO_A01_plate_6_HILICneg_supernatant_SZ_04262024_43 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=KO_A01_plate_6_HILICneg_supernatant_SZ_04262024_43.mzML SUBJECT_SAMPLE_FACTORS - CE_A06_plate_2_HILICneg_supernatant_SZ_04262024_45 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=CE_A06_plate_2_HILICneg_supernatant_SZ_04262024_45.mzML SUBJECT_SAMPLE_FACTORS - CE_B08_plate_2_HILICneg_supernatant_SZ_04262024_47 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=CE_B08_plate_2_HILICneg_supernatant_SZ_04262024_47.mzML SUBJECT_SAMPLE_FACTORS - PTC_D10_plate_4_HILICneg_supernatant_SZ_04262024_49 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=PTC_D10_plate_4_HILICneg_supernatant_SZ_04262024_49.mzML SUBJECT_SAMPLE_FACTORS - WT_2_plate_5_HILICneg_supernatant_SZ_04262024_51 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=WT_2_plate_5_HILICneg_supernatant_SZ_04262024_51.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_HILICneg_3_supernatant_SZ_04262024_53 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_HILICneg_3_supernatant_SZ_04262024_53.mzML SUBJECT_SAMPLE_FACTORS - WT_3_plate_4_HILICneg_supernatant_SZ_04262024_55 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=WT_3_plate_4_HILICneg_supernatant_SZ_04262024_55.mzML SUBJECT_SAMPLE_FACTORS - PTC_G09_plate_4_HILICneg_supernatant_SZ_04262024_57 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=PTC_G09_plate_4_HILICneg_supernatant_SZ_04262024_57.mzML SUBJECT_SAMPLE_FACTORS - WT_3_plate_1_HILICneg_supernatant_SZ_04262024_59 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=WT_3_plate_1_HILICneg_supernatant_SZ_04262024_59.mzML SUBJECT_SAMPLE_FACTORS - KO_A02_plate_1_HILICneg_supernatant_SZ_04262024_61 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=KO_A02_plate_1_HILICneg_supernatant_SZ_04262024_61.mzML SUBJECT_SAMPLE_FACTORS - PTC_D10_plate_2_HILICneg_supernatant_SZ_04262024_63 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=PTC_D10_plate_2_HILICneg_supernatant_SZ_04262024_63.mzML SUBJECT_SAMPLE_FACTORS - KO_A01_plate_5_HILICneg_supernatant_SZ_04262024_65 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=KO_A01_plate_5_HILICneg_supernatant_SZ_04262024_65.mzML SUBJECT_SAMPLE_FACTORS - KO_B01_plate_4_HILICneg_supernatant_SZ_04262024_67 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=KO_B01_plate_4_HILICneg_supernatant_SZ_04262024_67.mzML SUBJECT_SAMPLE_FACTORS - CE_B08_plate_1_HILICneg_supernatant_SZ_04262024_69 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=CE_B08_plate_1_HILICneg_supernatant_SZ_04262024_69.mzML SUBJECT_SAMPLE_FACTORS - CE_A06_plate_4_HILICneg_supernatant_SZ_04262024_71 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=CE_A06_plate_4_HILICneg_supernatant_SZ_04262024_71.mzML SUBJECT_SAMPLE_FACTORS - CE_A07_plate_6_HILICneg_supernatant_SZ_04262024_73 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=CE_A07_plate_6_HILICneg_supernatant_SZ_04262024_73.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_HILICneg_4_supernatant_SZ_04262024_75 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_HILICneg_4_supernatant_SZ_04262024_75.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_DDA_HILICneg_2_supernatant_SZ_04262024_77 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_DDA_HILICneg_2_supernatant_SZ_04262024_77.mzML SUBJECT_SAMPLE_FACTORS - WT_3_plate_6_HILICneg_supernatant_SZ_04262024_79 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=WT_3_plate_6_HILICneg_supernatant_SZ_04262024_79.mzML SUBJECT_SAMPLE_FACTORS - PTC_F10_plate_2_HILICneg_supernatant_SZ_04262024_81 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=PTC_F10_plate_2_HILICneg_supernatant_SZ_04262024_81.mzML SUBJECT_SAMPLE_FACTORS - WT_1_plate_2_HILICneg_supernatant_SZ_04262024_83 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=WT_1_plate_2_HILICneg_supernatant_SZ_04262024_83.mzML SUBJECT_SAMPLE_FACTORS - WT_2_plate_2_HILICneg_supernatant_SZ_04262024_85 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=WT_2_plate_2_HILICneg_supernatant_SZ_04262024_85.mzML SUBJECT_SAMPLE_FACTORS - KO_A02_plate_6_HILICneg_supernatant_SZ_04262024_87 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=KO_A02_plate_6_HILICneg_supernatant_SZ_04262024_87.mzML SUBJECT_SAMPLE_FACTORS - PTC_G09_plate_3_HILICneg_supernatant_SZ_04262024_89 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=PTC_G09_plate_3_HILICneg_supernatant_SZ_04262024_89.mzML SUBJECT_SAMPLE_FACTORS - PTC_D10_plate_6_HILICneg_supernatant_SZ_04262024_91 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=PTC_D10_plate_6_HILICneg_supernatant_SZ_04262024_91.mzML SUBJECT_SAMPLE_FACTORS - KO_A02_plate_3_HILICneg_supernatant_SZ_04262024_93 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=KO_A02_plate_3_HILICneg_supernatant_SZ_04262024_93.mzML SUBJECT_SAMPLE_FACTORS - WT_2_plate_4_HILICneg_supernatant_SZ_04262024_95 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=WT_2_plate_4_HILICneg_supernatant_SZ_04262024_95.mzML SUBJECT_SAMPLE_FACTORS - KO_A01_plate_3_HILICneg_supernatant_SZ_04262024_97 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=KO_A01_plate_3_HILICneg_supernatant_SZ_04262024_97.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_HILICneg_5_supernatant_SZ_04262024_99 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_HILICneg_5_supernatant_SZ_04262024_99.mzML SUBJECT_SAMPLE_FACTORS - CE_A07_plate_1_HILICneg_supernatant_SZ_04262024_101 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=CE_A07_plate_1_HILICneg_supernatant_SZ_04262024_101.mzML SUBJECT_SAMPLE_FACTORS - PTC_F10_plate_5_HILICneg_supernatant_SZ_04262024_103 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=PTC_F10_plate_5_HILICneg_supernatant_SZ_04262024_103.mzML SUBJECT_SAMPLE_FACTORS - PTC_G09_plate_6_HILICneg_supernatant_SZ_04262024_105 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=PTC_G09_plate_6_HILICneg_supernatant_SZ_04262024_105.mzML SUBJECT_SAMPLE_FACTORS - CE_B08_plate_3_HILICneg_supernatant_SZ_04262024_107 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=CE_B08_plate_3_HILICneg_supernatant_SZ_04262024_107.mzML SUBJECT_SAMPLE_FACTORS - KO_B01_plate_5_HILICneg_supernatant_SZ_04262024_109 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=KO_B01_plate_5_HILICneg_supernatant_SZ_04262024_109.mzML SUBJECT_SAMPLE_FACTORS - CE_A06_plate_1_HILICneg_supernatant_SZ_04262024_111 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=CE_A06_plate_1_HILICneg_supernatant_SZ_04262024_111.mzML SUBJECT_SAMPLE_FACTORS - WT_2_plate_6_HILICneg_supernatant_SZ_04262024_113 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=WT_2_plate_6_HILICneg_supernatant_SZ_04262024_113.mzML SUBJECT_SAMPLE_FACTORS - WT_1_plate_1_HILICneg_supernatant_SZ_04262024_115 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=WT_1_plate_1_HILICneg_supernatant_SZ_04262024_115.mzML SUBJECT_SAMPLE_FACTORS - KO_B01_plate_3_HILICneg_supernatant_SZ_04262024_117 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=KO_B01_plate_3_HILICneg_supernatant_SZ_04262024_117.mzML SUBJECT_SAMPLE_FACTORS - CE_B08_plate_6_HILICneg_supernatant_SZ_04262024_119 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=CE_B08_plate_6_HILICneg_supernatant_SZ_04262024_119.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_HILICneg_6_supernatant_SZ_04262024_121 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_HILICneg_6_supernatant_SZ_04262024_121.mzML SUBJECT_SAMPLE_FACTORS - PTC_F10_plate_3_HILICneg_supernatant_SZ_04262024_123 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=PTC_F10_plate_3_HILICneg_supernatant_SZ_04262024_123.mzML SUBJECT_SAMPLE_FACTORS - WT_2_plate_1_HILICneg_supernatant_SZ_04262024_125 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=WT_2_plate_1_HILICneg_supernatant_SZ_04262024_125.mzML SUBJECT_SAMPLE_FACTORS - CE_A06_plate_5_HILICneg_supernatant_SZ_04262024_127 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=CE_A06_plate_5_HILICneg_supernatant_SZ_04262024_127.mzML SUBJECT_SAMPLE_FACTORS - CE_A07_plate_4_HILICneg_supernatant_SZ_04262024_129 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=CE_A07_plate_4_HILICneg_supernatant_SZ_04262024_129.mzML SUBJECT_SAMPLE_FACTORS - WT_3_plate_5_HILICneg_supernatant_SZ_04262024_131 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=WT_3_plate_5_HILICneg_supernatant_SZ_04262024_131.mzML SUBJECT_SAMPLE_FACTORS - PTC_G09_plate_1_HILICneg_supernatant_SZ_04262024_133 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=PTC_G09_plate_1_HILICneg_supernatant_SZ_04262024_133.mzML SUBJECT_SAMPLE_FACTORS - KO_A01_plate_4_HILICneg_supernatant_SZ_04262024_135 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=KO_A01_plate_4_HILICneg_supernatant_SZ_04262024_135.mzML SUBJECT_SAMPLE_FACTORS - WT_2_plate_3_HILICneg_supernatant_SZ_04262024_137 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=WT_2_plate_3_HILICneg_supernatant_SZ_04262024_137.mzML SUBJECT_SAMPLE_FACTORS - PTC_D10_plate_3_HILICneg_supernatant_SZ_04262024_139 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=PTC_D10_plate_3_HILICneg_supernatant_SZ_04262024_139.mzML SUBJECT_SAMPLE_FACTORS - KO_A02_plate_5_HILICneg_supernatant_SZ_04262024_141 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=KO_A02_plate_5_HILICneg_supernatant_SZ_04262024_141.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_HILICneg_7_supernatant_SZ_04262024_143 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_HILICneg_7_supernatant_SZ_04262024_143.mzML SUBJECT_SAMPLE_FACTORS - PTC_G09_plate_2_HILICneg_supernatant_SZ_04262024_145 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=PTC_G09_plate_2_HILICneg_supernatant_SZ_04262024_145.mzML SUBJECT_SAMPLE_FACTORS - CE_A06_plate_3_HILICneg_supernatant_SZ_04262024_147 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=CE_A06_plate_3_HILICneg_supernatant_SZ_04262024_147.mzML SUBJECT_SAMPLE_FACTORS - WT_1_plate_6_HILICneg_supernatant_SZ_04262024_149 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=WT_1_plate_6_HILICneg_supernatant_SZ_04262024_149.mzML SUBJECT_SAMPLE_FACTORS - WT_1_plate_4_HILICneg_supernatant_SZ_04262024_151 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=WT_1_plate_4_HILICneg_supernatant_SZ_04262024_151.mzML SUBJECT_SAMPLE_FACTORS - KO_A02_plate_4_HILICneg_supernatant_SZ_04262024_153 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=KO_A02_plate_4_HILICneg_supernatant_SZ_04262024_153.mzML SUBJECT_SAMPLE_FACTORS - CE_B08_plate_4_HILICneg_supernatant_SZ_04262024_155 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=CE_B08_plate_4_HILICneg_supernatant_SZ_04262024_155.mzML SUBJECT_SAMPLE_FACTORS - CE_A07_plate_2_HILICneg_supernatant_SZ_04262024_157 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=CE_A07_plate_2_HILICneg_supernatant_SZ_04262024_157.mzML SUBJECT_SAMPLE_FACTORS - PTC_F10_plate_6_HILICneg_supernatant_SZ_04262024_159 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=PTC_F10_plate_6_HILICneg_supernatant_SZ_04262024_159.mzML SUBJECT_SAMPLE_FACTORS - KO_B01_plate_1_HILICneg_supernatant_SZ_04262024_161 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=KO_B01_plate_1_HILICneg_supernatant_SZ_04262024_161.mzML SUBJECT_SAMPLE_FACTORS - WT_3_plate_3_HILICneg_supernatant_SZ_04262024_163 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=WT_3_plate_3_HILICneg_supernatant_SZ_04262024_163.mzML SUBJECT_SAMPLE_FACTORS - PTC_D10_plate_5_HILICneg_supernatant_SZ_04262024_165 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=PTC_D10_plate_5_HILICneg_supernatant_SZ_04262024_165.mzML SUBJECT_SAMPLE_FACTORS - KO_A01_plate_1_HILICneg_supernatant_SZ_04262024_167 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=KO_A01_plate_1_HILICneg_supernatant_SZ_04262024_167.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_HILICneg_8_supernatant_SZ_04262024_169 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_HILICneg_8_supernatant_SZ_04262024_169.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_DDA_HILICneg_3_supernatant_SZ_04262024_171 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_DDA_HILICneg_3_supernatant_SZ_04262024_171.mzML SUBJECT_SAMPLE_FACTORS - Qstd_HILICneg_2_supernatant_SZ_04262024_173 Sample source:Qstd | GROUP:- RAW_FILE_NAME(Raw file name)=Qstd_HILICneg_2_supernatant_SZ_04262024_173.mzML SUBJECT_SAMPLE_FACTORS - Process_Blank_HILICneg_2_supernatant_SZ_04262024_175 Sample source:Process_Blank | GROUP:- RAW_FILE_NAME(Raw file name)=Process_Blank_HILICneg_2_supernatant_SZ_04262024_175.mzML SUBJECT_SAMPLE_FACTORS - Solvent_Blank_HILICneg_2_supernatant_SZ_04262024_177 Sample source:Solvent_Blank | GROUP:- RAW_FILE_NAME(Raw file name)=Solvent_Blank_HILICneg_2_supernatant_SZ_04262024_177.mzML SUBJECT_SAMPLE_FACTORS - Solvent_Blank_RPpos_1_supernatant_SZ_04262024_02 Sample source:Solvent_Blank | GROUP:- RAW_FILE_NAME(Raw file name)=Solvent_Blank_RPpos_1_supernatant_SZ_04262024_02.mzML SUBJECT_SAMPLE_FACTORS - Process_Blank_RPpos_1_supernatant_SZ_04262024_04 Sample source:Process_Blank | GROUP:- RAW_FILE_NAME(Raw file name)=Process_Blank_RPpos_1_supernatant_SZ_04262024_04.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_RPpos_1_supernatant_SZ_04262024_06 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_RPpos_1_supernatant_SZ_04262024_06.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_DDA_RPpos_1_supernatant_SZ_04262024_08 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_DDA_RPpos_1_supernatant_SZ_04262024_08.mzML SUBJECT_SAMPLE_FACTORS - Qstd_RPpos_1_supernatant_SZ_04262024_10 Sample source:Qstd | GROUP:- RAW_FILE_NAME(Raw file name)=Qstd_RPpos_1_supernatant_SZ_04262024_10.mzML SUBJECT_SAMPLE_FACTORS - WT_3_plate_2_RPpos_supernatant_SZ_04262024_12 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=WT_3_plate_2_RPpos_supernatant_SZ_04262024_12.mzML SUBJECT_SAMPLE_FACTORS - KO_A01_plate_2_RPpos_supernatant_SZ_04262024_14 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=KO_A01_plate_2_RPpos_supernatant_SZ_04262024_14.mzML SUBJECT_SAMPLE_FACTORS - CE_A07_plate_5_RPpos_supernatant_SZ_04262024_16 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=CE_A07_plate_5_RPpos_supernatant_SZ_04262024_16.mzML SUBJECT_SAMPLE_FACTORS - KO_A02_plate_2_RPpos_supernatant_SZ_04262024_18 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=KO_A02_plate_2_RPpos_supernatant_SZ_04262024_18.mzML SUBJECT_SAMPLE_FACTORS - CE_A06_plate_6_RPpos_supernatant_SZ_04262024_20 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=CE_A06_plate_6_RPpos_supernatant_SZ_04262024_20.mzML SUBJECT_SAMPLE_FACTORS - WT_1_plate_3_RPpos_supernatant_SZ_04262024_22 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=WT_1_plate_3_RPpos_supernatant_SZ_04262024_22.mzML SUBJECT_SAMPLE_FACTORS - PTC_G09_plate_5_RPpos_supernatant_SZ_04262024_24 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=PTC_G09_plate_5_RPpos_supernatant_SZ_04262024_24.mzML SUBJECT_SAMPLE_FACTORS - PTC_F10_plate_1_RPpos_supernatant_SZ_04262024_26 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=PTC_F10_plate_1_RPpos_supernatant_SZ_04262024_26.mzML SUBJECT_SAMPLE_FACTORS - CE_B08_plate_5_RPpos_supernatant_SZ_04262024_28 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=CE_B08_plate_5_RPpos_supernatant_SZ_04262024_28.mzML SUBJECT_SAMPLE_FACTORS - PTC_D10_plate_1_RPpos_supernatant_SZ_04262024_30 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=PTC_D10_plate_1_RPpos_supernatant_SZ_04262024_30.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_RPpos_2_supernatant_SZ_04262024_32 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_RPpos_2_supernatant_SZ_04262024_32.mzML SUBJECT_SAMPLE_FACTORS - KO_B01_plate_6_RPpos_supernatant_SZ_04262024_34 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=KO_B01_plate_6_RPpos_supernatant_SZ_04262024_34.mzML SUBJECT_SAMPLE_FACTORS - WT_1_plate_5_RPpos_supernatant_SZ_04262024_36 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=WT_1_plate_5_RPpos_supernatant_SZ_04262024_36.mzML SUBJECT_SAMPLE_FACTORS - PTC_F10_plate_4_RPpos_supernatant_SZ_04262024_38 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=PTC_F10_plate_4_RPpos_supernatant_SZ_04262024_38.mzML SUBJECT_SAMPLE_FACTORS - CE_A07_plate_3_RPpos_supernatant_SZ_04262024_40 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=CE_A07_plate_3_RPpos_supernatant_SZ_04262024_40.mzML SUBJECT_SAMPLE_FACTORS - KO_B01_plate_2_RPpos_supernatant_SZ_04262024_42 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=KO_B01_plate_2_RPpos_supernatant_SZ_04262024_42.mzML SUBJECT_SAMPLE_FACTORS - KO_A01_plate_6_RPpos_supernatant_SZ_04262024_44 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=KO_A01_plate_6_RPpos_supernatant_SZ_04262024_44.mzML SUBJECT_SAMPLE_FACTORS - CE_A06_plate_2_RPpos_supernatant_SZ_04262024_46 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=CE_A06_plate_2_RPpos_supernatant_SZ_04262024_46.mzML SUBJECT_SAMPLE_FACTORS - CE_B08_plate_2_RPpos_supernatant_SZ_04262024_48 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=CE_B08_plate_2_RPpos_supernatant_SZ_04262024_48.mzML SUBJECT_SAMPLE_FACTORS - PTC_D10_plate_4_RPpos_supernatant_SZ_04262024_50 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=PTC_D10_plate_4_RPpos_supernatant_SZ_04262024_50.mzML SUBJECT_SAMPLE_FACTORS - WT_2_plate_5_RPpos_supernatant_SZ_04262024_52 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=WT_2_plate_5_RPpos_supernatant_SZ_04262024_52.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_RPpos_3_supernatant_SZ_04262024_54 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_RPpos_3_supernatant_SZ_04262024_54.mzML SUBJECT_SAMPLE_FACTORS - WT_3_plate_4_RPpos_supernatant_SZ_04262024_56 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=WT_3_plate_4_RPpos_supernatant_SZ_04262024_56.mzML SUBJECT_SAMPLE_FACTORS - PTC_G09_plate_4_RPpos_supernatant_SZ_04262024_58 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=PTC_G09_plate_4_RPpos_supernatant_SZ_04262024_58.mzML SUBJECT_SAMPLE_FACTORS - WT_3_plate_1_RPpos_supernatant_SZ_04262024_60 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=WT_3_plate_1_RPpos_supernatant_SZ_04262024_60.mzML SUBJECT_SAMPLE_FACTORS - KO_A02_plate_1_RPpos_supernatant_SZ_04262024_62 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=KO_A02_plate_1_RPpos_supernatant_SZ_04262024_62.mzML SUBJECT_SAMPLE_FACTORS - PTC_D10_plate_2_RPpos_supernatant_SZ_04262024_64 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=PTC_D10_plate_2_RPpos_supernatant_SZ_04262024_64.mzML SUBJECT_SAMPLE_FACTORS - KO_A01_plate_5_RPpos_supernatant_SZ_04262024_66 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=KO_A01_plate_5_RPpos_supernatant_SZ_04262024_66.mzML SUBJECT_SAMPLE_FACTORS - KO_B01_plate_4_RPpos_supernatant_SZ_04262024_68 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=KO_B01_plate_4_RPpos_supernatant_SZ_04262024_68.mzML SUBJECT_SAMPLE_FACTORS - CE_B08_plate_1_RPpos_supernatant_SZ_04262024_70 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=CE_B08_plate_1_RPpos_supernatant_SZ_04262024_70.mzML SUBJECT_SAMPLE_FACTORS - CE_A06_plate_4_RPpos_supernatant_SZ_04262024_72 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=CE_A06_plate_4_RPpos_supernatant_SZ_04262024_72.mzML SUBJECT_SAMPLE_FACTORS - CE_A07_plate_6_RPpos_supernatant_SZ_04262024_74 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=CE_A07_plate_6_RPpos_supernatant_SZ_04262024_74.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_RPpos_4_supernatant_SZ_04262024_76 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_RPpos_4_supernatant_SZ_04262024_76.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_DDA_RPpos_2_supernatant_SZ_04262024_78 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_DDA_RPpos_2_supernatant_SZ_04262024_78.mzML SUBJECT_SAMPLE_FACTORS - WT_3_plate_6_RPpos_supernatant_SZ_04262024_80 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=WT_3_plate_6_RPpos_supernatant_SZ_04262024_80.mzML SUBJECT_SAMPLE_FACTORS - PTC_F10_plate_2_RPpos_supernatant_SZ_04262024_82 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=PTC_F10_plate_2_RPpos_supernatant_SZ_04262024_82.mzML SUBJECT_SAMPLE_FACTORS - WT_1_plate_2_RPpos_supernatant_SZ_04262024_84 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=WT_1_plate_2_RPpos_supernatant_SZ_04262024_84.mzML SUBJECT_SAMPLE_FACTORS - WT_2_plate_2_RPpos_supernatant_SZ_04262024_86 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=WT_2_plate_2_RPpos_supernatant_SZ_04262024_86.mzML SUBJECT_SAMPLE_FACTORS - KO_A02_plate_6_RPpos_supernatant_SZ_04262024_88 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=KO_A02_plate_6_RPpos_supernatant_SZ_04262024_88.mzML SUBJECT_SAMPLE_FACTORS - PTC_G09_plate_3_RPpos_supernatant_SZ_04262024_90 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=PTC_G09_plate_3_RPpos_supernatant_SZ_04262024_90.mzML SUBJECT_SAMPLE_FACTORS - PTC_D10_plate_6_RPpos_supernatant_SZ_04262024_92 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=PTC_D10_plate_6_RPpos_supernatant_SZ_04262024_92.mzML SUBJECT_SAMPLE_FACTORS - KO_A02_plate_3_RPpos_supernatant_SZ_04262024_94 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=KO_A02_plate_3_RPpos_supernatant_SZ_04262024_94.mzML SUBJECT_SAMPLE_FACTORS - WT_2_plate_4_RPpos_supernatant_SZ_04262024_96 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=WT_2_plate_4_RPpos_supernatant_SZ_04262024_96.mzML SUBJECT_SAMPLE_FACTORS - KO_A01_plate_3_RPpos_supernatant_SZ_04262024_98 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=KO_A01_plate_3_RPpos_supernatant_SZ_04262024_98.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_RPpos_5_supernatant_SZ_04262024_100 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_RPpos_5_supernatant_SZ_04262024_100.mzML SUBJECT_SAMPLE_FACTORS - CE_A07_plate_1_RPpos_supernatant_SZ_04262024_102 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=CE_A07_plate_1_RPpos_supernatant_SZ_04262024_102.mzML SUBJECT_SAMPLE_FACTORS - PTC_F10_plate_5_RPpos_supernatant_SZ_04262024_104 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=PTC_F10_plate_5_RPpos_supernatant_SZ_04262024_104.mzML SUBJECT_SAMPLE_FACTORS - PTC_G09_plate_6_RPpos_supernatant_SZ_04262024_106 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=PTC_G09_plate_6_RPpos_supernatant_SZ_04262024_106.mzML SUBJECT_SAMPLE_FACTORS - CE_B08_plate_3_RPpos_supernatant_SZ_04262024_108 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=CE_B08_plate_3_RPpos_supernatant_SZ_04262024_108.mzML SUBJECT_SAMPLE_FACTORS - KO_B01_plate_5_RPpos_supernatant_SZ_04262024_110 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=KO_B01_plate_5_RPpos_supernatant_SZ_04262024_110.mzML SUBJECT_SAMPLE_FACTORS - CE_A06_plate_1_RPpos_supernatant_SZ_04262024_112 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=CE_A06_plate_1_RPpos_supernatant_SZ_04262024_112.mzML SUBJECT_SAMPLE_FACTORS - WT_2_plate_6_RPpos_supernatant_SZ_04262024_114 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=WT_2_plate_6_RPpos_supernatant_SZ_04262024_114.mzML SUBJECT_SAMPLE_FACTORS - WT_1_plate_1_RPpos_supernatant_SZ_04262024_116 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=WT_1_plate_1_RPpos_supernatant_SZ_04262024_116.mzML SUBJECT_SAMPLE_FACTORS - KO_B01_plate_3_RPpos_supernatant_SZ_04262024_118 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=KO_B01_plate_3_RPpos_supernatant_SZ_04262024_118.mzML SUBJECT_SAMPLE_FACTORS - CE_B08_plate_6_RPpos_supernatant_SZ_04262024_120 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=CE_B08_plate_6_RPpos_supernatant_SZ_04262024_120.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_RPpos_6_supernatant_SZ_04262024_122 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_RPpos_6_supernatant_SZ_04262024_122.mzML SUBJECT_SAMPLE_FACTORS - PTC_F10_plate_3_RPpos_supernatant_SZ_04262024_124 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=PTC_F10_plate_3_RPpos_supernatant_SZ_04262024_124.mzML SUBJECT_SAMPLE_FACTORS - WT_2_plate_1_RPpos_supernatant_SZ_04262024_126 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=WT_2_plate_1_RPpos_supernatant_SZ_04262024_126.mzML SUBJECT_SAMPLE_FACTORS - CE_A06_plate_5_RPpos_supernatant_SZ_04262024_128 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=CE_A06_plate_5_RPpos_supernatant_SZ_04262024_128.mzML SUBJECT_SAMPLE_FACTORS - CE_A07_plate_4_RPpos_supernatant_SZ_04262024_130 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=CE_A07_plate_4_RPpos_supernatant_SZ_04262024_130.mzML SUBJECT_SAMPLE_FACTORS - WT_3_plate_5_RPpos_supernatant_SZ_04262024_132 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=WT_3_plate_5_RPpos_supernatant_SZ_04262024_132.mzML SUBJECT_SAMPLE_FACTORS - PTC_G09_plate_1_RPpos_supernatant_SZ_04262024_134 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=PTC_G09_plate_1_RPpos_supernatant_SZ_04262024_134.mzML SUBJECT_SAMPLE_FACTORS - KO_A01_plate_4_RPpos_supernatant_SZ_04262024_136 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=KO_A01_plate_4_RPpos_supernatant_SZ_04262024_136.mzML SUBJECT_SAMPLE_FACTORS - WT_2_plate_3_RPpos_supernatant_SZ_04262024_138 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=WT_2_plate_3_RPpos_supernatant_SZ_04262024_138.mzML SUBJECT_SAMPLE_FACTORS - PTC_D10_plate_3_RPpos_supernatant_SZ_04262024_140 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=PTC_D10_plate_3_RPpos_supernatant_SZ_04262024_140.mzML SUBJECT_SAMPLE_FACTORS - KO_A02_plate_5_RPpos_supernatant_SZ_04262024_142 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=KO_A02_plate_5_RPpos_supernatant_SZ_04262024_142.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_RPpos_7_supernatant_SZ_04262024_144 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_RPpos_7_supernatant_SZ_04262024_144.mzML SUBJECT_SAMPLE_FACTORS - PTC_G09_plate_2_RPpos_supernatant_SZ_04262024_146 Sample source:study sample | GROUP:PT,Basal RAW_FILE_NAME(Raw file name)=PTC_G09_plate_2_RPpos_supernatant_SZ_04262024_146.mzML SUBJECT_SAMPLE_FACTORS - CE_A06_plate_3_RPpos_supernatant_SZ_04262024_148 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=CE_A06_plate_3_RPpos_supernatant_SZ_04262024_148.mzML SUBJECT_SAMPLE_FACTORS - WT_1_plate_6_RPpos_supernatant_SZ_04262024_150 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=WT_1_plate_6_RPpos_supernatant_SZ_04262024_150.mzML SUBJECT_SAMPLE_FACTORS - WT_1_plate_4_RPpos_supernatant_SZ_04262024_152 Sample source:study sample | GROUP:WT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=WT_1_plate_4_RPpos_supernatant_SZ_04262024_152.mzML SUBJECT_SAMPLE_FACTORS - KO_A02_plate_4_RPpos_supernatant_SZ_04262024_154 Sample source:study sample | GROUP:KO,Basal+DHEAS RAW_FILE_NAME(Raw file name)=KO_A02_plate_4_RPpos_supernatant_SZ_04262024_154.mzML SUBJECT_SAMPLE_FACTORS - CE_B08_plate_4_RPpos_supernatant_SZ_04262024_156 Sample source:study sample | GROUP:CE,Basal+DHEAS RAW_FILE_NAME(Raw file name)=CE_B08_plate_4_RPpos_supernatant_SZ_04262024_156.mzML SUBJECT_SAMPLE_FACTORS - CE_A07_plate_2_RPpos_supernatant_SZ_04262024_158 Sample source:study sample | GROUP:CE,Basal RAW_FILE_NAME(Raw file name)=CE_A07_plate_2_RPpos_supernatant_SZ_04262024_158.mzML SUBJECT_SAMPLE_FACTORS - PTC_F10_plate_6_RPpos_supernatant_SZ_04262024_160 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=PTC_F10_plate_6_RPpos_supernatant_SZ_04262024_160.mzML SUBJECT_SAMPLE_FACTORS - KO_B01_plate_1_RPpos_supernatant_SZ_04262024_162 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=KO_B01_plate_1_RPpos_supernatant_SZ_04262024_162.mzML SUBJECT_SAMPLE_FACTORS - WT_3_plate_3_RPpos_supernatant_SZ_04262024_164 Sample source:study sample | GROUP:WT,Basal RAW_FILE_NAME(Raw file name)=WT_3_plate_3_RPpos_supernatant_SZ_04262024_164.mzML SUBJECT_SAMPLE_FACTORS - PTC_D10_plate_5_RPpos_supernatant_SZ_04262024_166 Sample source:study sample | GROUP:PT,Basal+DHEAS RAW_FILE_NAME(Raw file name)=PTC_D10_plate_5_RPpos_supernatant_SZ_04262024_166.mzML SUBJECT_SAMPLE_FACTORS - KO_A01_plate_1_RPpos_supernatant_SZ_04262024_168 Sample source:study sample | GROUP:KO,Basal RAW_FILE_NAME(Raw file name)=KO_A01_plate_1_RPpos_supernatant_SZ_04262024_168.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_RPpos_8_supernatant_SZ_04262024_170 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_RPpos_8_supernatant_SZ_04262024_170.mzML SUBJECT_SAMPLE_FACTORS - Pool_QC_DDA_RPpos_3_supernatant_SZ_04262024_172 Sample source:Pool_QC | GROUP:- RAW_FILE_NAME(Raw file name)=Pool_QC_DDA_RPpos_3_supernatant_SZ_04262024_172.mzML SUBJECT_SAMPLE_FACTORS - Qstd_RPpos_2_supernatant_SZ_04262024_174 Sample source:Qstd | GROUP:- RAW_FILE_NAME(Raw file name)=Qstd_RPpos_2_supernatant_SZ_04262024_174.mzML SUBJECT_SAMPLE_FACTORS - Process_Blank_RPpos_2_supernatant_SZ_04262024_176 Sample source:Process_Blank | GROUP:- RAW_FILE_NAME(Raw file name)=Process_Blank_RPpos_2_supernatant_SZ_04262024_176.mzML SUBJECT_SAMPLE_FACTORS - Solvent_Blank_RPpos_2_supernatant_SZ_04262024_178 Sample source:Solvent_Blank | GROUP:- RAW_FILE_NAME(Raw file name)=Solvent_Blank_RPpos_2_supernatant_SZ_04262024_178.mzML #COLLECTION CO:COLLECTION_SUMMARY For the media collection, 500ul of media was directly aspirated into 1.5 ml CO:COLLECTION_SUMMARY Eppendorf tube from each well and flash frozen with liquid nitrogen, stored CO:COLLECTION_SUMMARY immediately at -80 degree C. CO:SAMPLE_TYPE iPSC cells #TREATMENT TR:TREATMENT_SUMMARY KOLF2.2J cells were passaged as single cells with Accutase and seeded onto TR:TREATMENT_SUMMARY SynthemaxII coated 12-well plates at 10k cells per well. 24 h after cell TR:TREATMENT_SUMMARY passage, StemFlex media was changed to trophectoderm induction media (TE media). TR:TREATMENT_SUMMARY Basal TE media consists of DMEM/F12, supplemented with 20% KnockOut Serum TR:TREATMENT_SUMMARY (ThermoFisher, #10828028), 2 mM L-Glutamine (Gibco™, #25030081), 1x MEM TR:TREATMENT_SUMMARY non-essential amnio acid (GibcoTM, #11140050), 0.1 mM β-Mercaptoethanol (Sigma, TR:TREATMENT_SUMMARY #3148). In addition, 100 ng/ml BMP4 (R&D, #314-BP- 050/CF), and 20 μM SU5402 TR:TREATMENT_SUMMARY (Millipore Sigma, # 57263) were added at day 0 and onwards to induce trophoblast TR:TREATMENT_SUMMARY lineage (BS condition). For the induction of primitive syncytium, 1 mM A-83 TR:TREATMENT_SUMMARY (TOCRIS, #2939) was added at the end of Day 2. Media was refreshed every 2 days TR:TREATMENT_SUMMARY until the end of differentiation (Day 6). On day 6, TE media was replaced by the TR:TREATMENT_SUMMARY StemFlex media with or without addition of nutrients 24 hours prior to TR:TREATMENT_SUMMARY collection. #SAMPLEPREP SP:SAMPLEPREP_SUMMARY See from protocol file. SP:SAMPLEPREP_PROTOCOL_FILENAME Sample_preparation_supernatant_04012024.docx, standards_steroids.xlsx #CHROMATOGRAPHY CH:CHROMATOGRAPHY_SUMMARY See protocol file CH:CHROMATOGRAPHY_TYPE Reversed phase CH:INSTRUMENT_NAME Thermo Vanquish CH:COLUMN_NAME Thermo Hypersil GOLD (50 x 2.1mm, 3um) CH:SOLVENT_A 100% water; 0.1% formic acid CH:SOLVENT_B 100% acetonitrile; 0.1% formic acid CH:FLOW_GRADIENT 0.0min: 85%A, 0.01min: 70%A, 2.01min: 52%A, 2.51min: 18%A, 11.0min: 1%A, CH:FLOW_GRADIENT 11.5min: 1%A, 12.0min: 1%A, 15.0min: 0%A, 16.5min: 85%A, 17.5min: 85%A CH:FLOW_RATE 0.4 mL/min CH:COLUMN_TEMPERATURE 45 CH:METHODS_FILENAME LC-MS.docx #ANALYSIS AN:ANALYSIS_TYPE MS AN:ANALYSIS_PROTOCOL_FILE LC-MS.docx #MS MS:INSTRUMENT_NAME Thermo Q Exactive HF-X Orbitrap MS:INSTRUMENT_TYPE Orbitrap MS:MS_TYPE ESI MS:ION_MODE POSITIVE MS:MS_COMMENTS See from Protocol file. MS:MS_RESULTS_FILE ST003325_AN005445_Results.txt UNITS:peak intensity Has m/z:Yes Has RT:Yes RT units:Seconds #END