#METABOLOMICS WORKBENCH yohei57jp_20241209_011357 DATATRACK_ID:5444 STUDY_ID:ST003626 ANALYSIS_ID:AN005956 PROJECT_ID:PR002239 VERSION 1 CREATED_ON December 12, 2024, 5:31 pm #PROJECT PR:PROJECT_TITLE Metabolomic profile of human regulatory T cells. PR:PROJECT_SUMMARY Regulatory T cells (Tregs) are characterized by stable FOXP3 expression and PR:PROJECT_SUMMARY controlling immune response by suppressive activity. Unique metabolic properties PR:PROJECT_SUMMARY of Tregs are shown such as reduced glycolysis and increased oxidative PR:PROJECT_SUMMARY phosphorylation. We have combined transcriptomics, metabolomics and lipidomics PR:PROJECT_SUMMARY to dissect metabolic dynamics of Tregs upon activation. Combined metabolomic and PR:PROJECT_SUMMARY lipidomic analysis showed that freshly isolated Tregs have unique metabolomic PR:PROJECT_SUMMARY property, on the other hand, activated Tregs have unique lipidomic property. PR:PROJECT_SUMMARY Interestingly, activated Tregs contained omega-3 polyunsaturated fatty acids PR:PROJECT_SUMMARY (PUFA) enriched diglycerides and triglycerides. PR:INSTITUTE The Jikei University School of Medicine PR:LAST_NAME Sato PR:FIRST_NAME Yohei PR:ADDRESS 3-25-8 Nishishinbashi PR:EMAIL yoheisatoo@gmail.com PR:PHONE +81-3-3433-1111 #STUDY ST:STUDY_TITLE Metabolomic profile of human regulatory T cells. ST:STUDY_SUMMARY Regulatory T cells (Tregs) are characterized by stable FOXP3 expression and ST:STUDY_SUMMARY controlling immune response by suppressive activity. Unique metabolic properties ST:STUDY_SUMMARY of Tregs are shown such as reduced glycolysis and increased oxidative ST:STUDY_SUMMARY phosphorylation. We have combined transcriptomics, metabolomics and lipidomics ST:STUDY_SUMMARY to dissect metabolic dynamics of Tregs upon activation. Combined metabolomic and ST:STUDY_SUMMARY lipidomic analysis showed that freshly isolated Tregs have unique metabolomic ST:STUDY_SUMMARY property, on the other hand, activated Tregs have unique lipidomic property. ST:STUDY_SUMMARY Interestingly, activated Tregs contained omega-3 polyunsaturated fatty acids ST:STUDY_SUMMARY (PUFA) enriched diglycerides and triglycerides. ST:INSTITUTE The Jikei University School of Medicine ST:LAST_NAME Sato ST:FIRST_NAME Yohei ST:ADDRESS 3-25-8 Nishishinbashi ST:EMAIL yoheisatoo@gmail.com ST:PHONE +81-3-3433-1111 #SUBJECT SU:SUBJECT_TYPE Human SU:SUBJECT_SPECIES Homo sapiens SU:TAXONOMY_ID 9606 #FACTORS #SUBJECT_SAMPLE_FACTORS: SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Raw file names and additional sample data SUBJECT_SAMPLE_FACTORS - Teff1 Group:T-cells(Teff) | Sample source:- SUBJECT_SAMPLE_FACTORS - Teff2 Group:T-cells(Teff) | Sample source:- SUBJECT_SAMPLE_FACTORS - Teff3 Group:T-cells(Teff) | Sample source:- SUBJECT_SAMPLE_FACTORS - Treg1 Group:T-cells(Treg) | Sample source:- SUBJECT_SAMPLE_FACTORS - Treg2 Group:T-cells(Treg) | Sample source:- SUBJECT_SAMPLE_FACTORS - Treg3 Group:T-cells(Treg) | Sample source:- SUBJECT_SAMPLE_FACTORS - Activated Teff1 Group:Activated T-cells(Teff) | Sample source:- SUBJECT_SAMPLE_FACTORS - Activated Teff2 Group:Activated T-cells(Teff) | Sample source:- SUBJECT_SAMPLE_FACTORS - Activated Teff3 Group:Activated T-cells(Teff) | Sample source:- SUBJECT_SAMPLE_FACTORS - Activated Treg1 Group:Activated T-cells(Treg) | Sample source:- SUBJECT_SAMPLE_FACTORS - Activated Treg2 Group:Activated T-cells(Treg) | Sample source:- SUBJECT_SAMPLE_FACTORS - Activated Treg3 Group:Activated T-cells(Treg) | Sample source:- #COLLECTION CO:COLLECTION_SUMMARY Human regulatory T cells were sorted according to the CD4+CD25+CD127- CO:COLLECTION_SUMMARY populations by flow cytometry. Human effector T cells were sorted according to CO:COLLECTION_SUMMARY the CD4+CD25-CD127+ populations by flow cytometry. Cells were directly sorted in CO:COLLECTION_SUMMARY RPMI medium supplemented with 10% FBS. Spin down the collected cells and cell CO:COLLECTION_SUMMARY pellets were stored at -80C. CO:SAMPLE_TYPE T-cells #TREATMENT TR:TREATMENT_SUMMARY Human regulatory T cells were sorted and activated overnight by CD3/CD28/CD2 TR:TREATMENT_SUMMARY stimulation in the presence of 100U/ml recombinant human IL-2. #SAMPLEPREP SP:SAMPLEPREP_SUMMARY After culturing the regulatory T cells, the medium was removed and washed twice SP:SAMPLEPREP_SUMMARY with mannitol (WAKO pure chemical). A methanol (WAKO pure chemical) solution was SP:SAMPLEPREP_SUMMARY added and stirred. Milli-Q water containing 10 μM of an internal standard (HMT, SP:SAMPLEPREP_SUMMARY Patent No. 6173667) was added and stirred, and centrifuged (2,300 × g, 4°C, 5 SP:SAMPLEPREP_SUMMARY min) (Patent No. 6173667). After centrifugation, the extract was transferred to SP:SAMPLEPREP_SUMMARY an ultrafiltration tube (Ultrafree MC PLHCC, HMT, centrifugal filter unit 5 SP:SAMPLEPREP_SUMMARY kDa). This was centrifuged (9,100 × g, 4°C) and subjected to ultrafiltration. SP:SAMPLEPREP_SUMMARY The filtrate was dried and dissolved in Milli-Q water again for measurement. #CHROMATOGRAPHY CH:CHROMATOGRAPHY_TYPE CE CH:INSTRUMENT_NAME Agilent 7100 CE CH:COLUMN_NAME Fused silica capillary i.d. 50 um x 80cm CH:SOLVENT_A Cation Buffer Solution (p/n:H3301-1001) CH:SOLVENT_B N/A CH:FLOW_GRADIENT N/A CH:FLOW_RATE N/A CH:COLUMN_TEMPERATURE N/A #ANALYSIS AN:ANALYSIS_TYPE MS #MS MS:INSTRUMENT_NAME Agilent 6230 TOF MS:INSTRUMENT_TYPE TOF MS:MS_TYPE ESI MS:ION_MODE POSITIVE MS:MS_COMMENTS CE-TOFMS(Basic) positive(Cation) mode. The detected peaks were matched and MS:MS_COMMENTS searched against all substances registered in the HMT metabolite library based MS:MS_COMMENTS on the m/z and MT values. The search tolerance was set to ± 0.5 min for MT and MS:MS_COMMENTS ± 10 ppm for m/z. Mass error (ppm) = (Actual value – theoretical value)/ MS:MS_COMMENTS Actual value×106 For substances with molecular weights of 100 or less and some MS:MS_COMMENTS substances expected to be present in large amounts in the sample, the tolerance MS:MS_COMMENTS was set wider than the above conditions and the search was performed. In MS:MS_COMMENTS addition, if the candidates could not be narrowed down and the same candidate MS:MS_COMMENTS metabolite was assigned to multiple peaks, a branch number was added and the MS:MS_COMMENTS list was displayed. The target metabolites were analyzed. The calibration curve MS:MS_COMMENTS was made using peak areas corrected by the internal standard substance, and the MS:MS_COMMENTS concentration was calculated for each substance with a single calibration of 100 MS:MS_COMMENTS μM (internal standard substance 200 μM). #MS_METABOLITE_DATA MS_METABOLITE_DATA:UNITS arbitrary number MS_METABOLITE_DATA_START Samples Teff1 Teff2 Teff3 Treg1 Treg2 Treg3 Activated Teff1 Activated Teff2 Activated Teff3 Activated Treg1 Activated Treg2 Activated Treg3 Factors Group:T-cells(Teff) | Sample source:- Group:T-cells(Teff) | Sample source:- Group:T-cells(Teff) | Sample source:- Group:T-cells(Treg) | Sample source:- Group:T-cells(Treg) | Sample source:- Group:T-cells(Treg) | Sample source:- Group:Activated T-cells(Teff) | Sample source:- Group:Activated T-cells(Teff) | Sample source:- Group:Activated T-cells(Teff) | Sample source:- Group:Activated T-cells(Treg) | Sample source:- Group:Activated T-cells(Treg) | Sample source:- Group:Activated T-cells(Treg) | Sample source:- Urea 2.0E+00 2.0E+00 2.1E+00 2.3E+00 2.2E+00 2.4E+00 9.2E-01 9.2E-01 9.4E-01 8.8E-01 8.9E-01 8.5E-01 Ethanolamine 2.0E-02 1.7E-02 2.2E-02 2.3E-02 3.5E-02 3.2E-02 1.5E-02 1.3E-02 1.4E-02 1.3E-02 1.4E-02 1.3E-02 Gly 7.3E-01 8.0E-01 7.7E-01 9.4E-01 8.9E-01 9.0E-01 3.4E-01 3.4E-01 3.4E-01 3.2E-01 3.3E-01 3.4E-01 Trimethylamine N-oxide 1.4E-02 1.6E-02 1.4E-02 1.6E-02 1.8E-02 1.8E-02 5.1E-03 5.9E-03 7.8E-03 5.3E-03 4.8E-03 7.0E-03 Piperidine 1.5E-03 2.6E-03 1.7E-03 1.7E-03 N.D. 1.9E-03 8.8E-04 1.1E-03 1.6E-03 6.7E-04 1.2E-03 1.0E-03 Morpholine N.D. 3.3E-03 N.D. N.D. N.D. N.D. 7.8E-04 N.D. N.D. N.D. N.D. N.D. Putrescine 1.6E-03 N.D. 1.8E-03 3.2E-03 1.7E-03 2.3E-03 1.9E-03 2.9E-03 2.9E-03 2.4E-03 2.1E-03 2.9E-03 β-Ala 2.3E-02 2.4E-02 2.4E-02 3.0E-02 2.5E-02 2.8E-02 1.5E-02 1.3E-02 1.6E-02 1.4E-02 1.3E-02 1.4E-02 Ala 8.6E-01 9.4E-01 9.0E-01 1.0E+00 9.8E-01 1.1E+00 3.6E-01 3.6E-01 3.7E-01 3.5E-01 3.5E-01 3.5E-01 Sarcosine 1.0E-02 9.4E-03 3.8E-03 9.1E-03 6.1E-03 1.3E-02 1.9E-03 N.D. N.D. 4.1E-03 3.6E-03 N.D. 2-Amino-2-methyl-1-propanol N.D. N.D. N.D. 1.3E-03 N.D. 1.2E-03 N.D. N.D. 1.2E-03 N.D. 1.1E-03 N.D. Dimethylaminoethanol 7.8E-03 1.0E-02 9.0E-03 1.0E-02 1.1E-02 1.0E-02 6.6E-03 6.2E-03 6.9E-03 5.9E-03 5.9E-03 6.2E-03 Glycerol 1.6E+00 7.8E-01 1.2E+00 3.5E+00 2.7E+00 2.5E+00 4.0E-01 4.9E-01 3.3E-01 4.9E-01 4.1E-01 3.8E-01 N,N-Dimethylglycine 1.1E-02 1.1E-02 1.2E-02 1.2E-02 1.3E-02 1.5E-02 4.3E-03 5.6E-03 4.2E-03 3.2E-03 3.2E-03 3.5E-03 GABA N.D. N.D. N.D. 5.1E-03 N.D. N.D. 4.0E-03 4.0E-03 2.8E-03 3.5E-03 3.5E-03 3.6E-03 2-Aminobutyric acid" 4.8E-02 4.9E-02 4.8E-02 5.7E-02 5.3E-02 5.2E-02 1.8E-02 1.9E-02 1.8E-02 1.8E-02 1.9E-02 1.9E-02 3-Aminoisobutyric acid N.D. N.D. N.D. 3.4E-03 N.D. 5.9E-03 N.D. N.D. N.D. N.D. N.D. N.D. Choline 5.7E-01 6.8E-01 7.0E-01 7.3E-01 7.8E-01 8.6E-01 2.4E-01 2.4E-01 2.7E-01 2.3E-01 2.1E-01 2.7E-01 Ser 1.3E+00 1.4E+00 1.3E+00 1.6E+00 1.5E+00 1.6E+00 5.7E-01 5.9E-01 5.9E-01 5.4E-01 5.3E-01 5.6E-01 Diethanolamine 2.5E-02 4.5E-02 2.8E-02 4.3E-02 5.1E-02 1.3E-01 2.1E-02 1.5E-02 3.5E-02 1.9E-02 2.0E-02 2.4E-02 Hypotaurine 1.7E-02 1.7E-02 1.9E-02 2.6E-02 2.7E-02 3.1E-02 9.2E-03 7.4E-03 8.4E-03 9.2E-03 9.3E-03 7.8E-03 Histamine 3.9E-03 5.3E-03 6.4E-03 7.6E-03 7.9E-03 1.0E-02 N.D. N.D. N.D. 5.3E-04 7.3E-04 4.3E-04 Uracil 6.7E-03 7.4E-03 5.2E-03 9.0E-03 6.7E-03 7.7E-03 N.D. N.D. N.D. N.D. N.D. N.D. Creatinine 2.6E-01 2.6E-01 2.8E-01 3.0E-01 3.0E-01 3.2E-01 9.8E-02 1.0E-01 1.0E-01 9.2E-02 9.7E-02 9.0E-02 3-Amino-2-piperidone 1.1E-03 N.D. 1.6E-03 1.6E-03 1.8E-03 1.9E-03 8.3E-04 N.D. 1.6E-03 9.2E-04 N.D. 9.7E-04 Pro 1.5E+00 1.7E+00 1.7E+00 1.8E+00 1.8E+00 2.0E+00 6.2E-01 7.0E-01 6.8E-01 6.1E-01 6.3E-01 6.6E-01 Guanidoacetic acid 2.8E-03 3.4E-03 4.0E-03 3.5E-03 3.1E-03 3.2E-03 1.5E-03 1.4E-03 1.3E-03 1.5E-03 1.4E-03 1.2E-03 Betaine 3.2E-01 3.3E-01 3.3E-01 4.0E-01 3.6E-01 4.0E-01 1.4E-01 1.3E-01 1.3E-01 1.3E-01 1.3E-01 1.2E-01 Val 2.3E+00 2.5E+00 2.5E+00 2.8E+00 2.8E+00 3.0E+00 9.5E-01 9.7E-01 1.0E+00 9.2E-01 9.2E-01 9.8E-01 Thr 9.7E-01 1.1E+00 1.1E+00 1.2E+00 1.2E+00 1.2E+00 4.5E-01 4.3E-01 4.4E-01 4.3E-01 4.3E-01 4.3E-01 2-Methylserine 2.8E-02 N.D. 1.5E-02 1.6E-02 1.8E-02 1.5E-02 1.8E-03 N.D. N.D. 1.6E-03 N.D. N.D. 4-Hydroxyphenethyl alcohol_-H2O 2.5E-02 3.5E-02 2.5E-02 3.2E-02 4.0E-02 2.8E-02 N.D. N.D. N.D. N.D. N.D. N.D. Homocarnosine_divalent" 1.4E-03 N.D. N.D. 2.5E-03 1.8E-03 3.1E-03 N.D. N.D. 1.3E-03 N.D. N.D. N.D. 2-Amino-2-(hydroxymethyl)-1,3-propanediol 4.7E-03 5.2E-03 3.2E-03 6.5E-03 4.4E-03 5.9E-03 1.6E-03 1.3E-03 9.7E-03 3.4E-03 3.4E-03 2.8E-03 Nicotinamide" 8.1E-02 7.6E-02 7.8E-02 8.8E-02 8.0E-02 9.1E-02 3.3E-02 3.4E-02 3.3E-02 3.4E-02 3.3E-02 3.2E-02 Taurine 1.6E-01 1.7E-01 1.9E-01 2.2E-01 2.4E-01 2.6E-01 9.5E-03 9.4E-03 1.1E-02 1.0E-02 1.3E-02 1.3E-02 Phloroglucinol 7.5E-01 8.0E-01 8.8E-01 8.5E-01 9.1E-01 1.0E+00 5.3E-02 6.1E-02 6.3E-02 5.9E-02 6.3E-02 5.6E-02 5-Amino-3,4-dihydro-2H-pyrrole-2-carboxylic acid 4.1E-02 4.0E-02 4.0E-02 4.7E-02 4.1E-02 4.5E-02 1.2E-02 1.3E-02 1.1E-02 1.1E-02 1.2E-02 1.0E-02 4-Oxopyrrolidine-2-carboxylic acid 2.1E-02 2.5E-02 2.5E-02 3.0E-02 2.3E-02 3.2E-02 1.2E-02 1.1E-02 1.2E-02 1.3E-02 1.1E-02 1.1E-02 1-Aminocyclopentanecarboxylic acid 2.1E-02 2.1E-02 2.0E-02 2.6E-02 2.3E-02 2.5E-02 8.0E-03 8.2E-03 8.2E-03 7.7E-03 8.4E-03 7.0E-03 Pipecolic acid N.D. 2.0E-03 N.D. 1.7E-03 2.7E-03 N.D. 8.8E-04 8.6E-04 N.D. 7.2E-04 N.D. N.D. Hydroxyproline 1.2E+00 1.3E+00 1.2E+00 1.4E+00 1.3E+00 1.4E+00 4.9E-01 4.7E-01 4.6E-01 4.5E-01 4.5E-01 4.4E-01 Creatine 4.6E-01 4.3E-01 4.2E-01 5.0E-01 4.6E-01 4.5E-01 1.7E-01 1.6E-01 1.4E-01 1.4E-01 1.4E-01 1.4E-01 Ile 4.6E+00 5.6E+00 5.5E+00 6.2E+00 5.5E+00 7.0E+00 2.2E+00 2.1E+00 2.3E+00 2.0E+00 2.0E+00 2.2E+00 Leu 5.7E+00 6.7E+00 6.8E+00 7.3E+00 6.4E+00 7.6E+00 2.3E+00 2.2E+00 2.5E+00 2.2E+00 2.2E+00 2.4E+00 Asn 1.6E+00 1.7E+00 1.7E+00 1.9E+00 1.9E+00 2.0E+00 6.8E-01 6.9E-01 6.7E-01 6.3E-01 6.4E-01 6.4E-01 Ornithine 4.0E-01 4.2E-01 4.3E-01 4.8E-01 4.8E-01 4.9E-01 3.0E-01 3.6E-01 3.4E-01 3.3E-01 3.4E-01 3.1E-01 Thiaproline 1.6E-01 1.7E-01 1.7E-01 2.0E-01 1.6E-01 2.1E-01 7.7E-02 5.2E-02 7.9E-02 7.9E-02 6.2E-02 7.4E-02 Asp 1.2E+00 1.3E+00 1.3E+00 1.5E+00 1.4E+00 1.4E+00 4.9E-01 4.7E-01 4.8E-01 4.7E-01 4.8E-01 4.6E-01 Acetanilide N.D. 2.1E-03 N.D. 2.8E-03 N.D. 2.8E-03 9.0E-04 N.D. N.D. 1.2E-03 9.4E-04 N.D. Hypoxanthine 5.6E-02 6.4E-02 5.6E-02 6.7E-02 6.6E-02 6.6E-02 1.8E-02 1.7E-02 1.9E-02 1.7E-02 1.8E-02 1.7E-02 p-Aminobenzoic acid 2.9E-02 3.1E-02 3.3E-02 3.3E-02 3.3E-02 3.6E-02 1.1E-02 1.2E-02 1.2E-02 9.7E-03 1.1E-02 1.1E-02 Urocanic acid N.D. N.D. N.D. 9.7E-04 N.D. N.D. 7.8E-04 N.D. 1.9E-03 9.2E-04 1.8E-03 2.0E-03 1H-Imidazole-4-propionic acid 1.1E-03 1.5E-03 1.0E-03 1.0E-03 N.D. 1.2E-03 4.0E-04 N.D. N.D. N.D. N.D. N.D. 1-Methyl-4-imidazoleacetic acid 4.5E-03 5.3E-03 3.4E-03 5.0E-03 5.2E-03 5.1E-03 1.5E-03 1.6E-03 2.3E-03 2.1E-03 1.9E-03 1.4E-03 Crotonic acid betaine 1.7E-03 1.1E-03 1.9E-03 1.9E-03 N.D. 2.3E-03 N.D. N.D. N.D. 6.8E-04 N.D. 3.8E-04 Stachydrine 2.3E-03 1.9E-03 N.D. 3.7E-03 2.9E-03 3.7E-03 N.D. N.D. N.D. N.D. N.D. 9.4E-04 4-Guanidinobutyric acid N.D. 1.5E-03 1.6E-03 2.0E-03 N.D. 1.7E-03 8.5E-04 9.1E-04 N.D. 9.2E-04 1.3E-03 1.0E-03 γ-Butyrobetaine 1.2E-02 9.5E-03 9.5E-03 1.3E-02 1.3E-02 1.2E-02 3.2E-03 3.5E-03 3.2E-03 3.1E-03 3.6E-03 2.7E-03 Spermidine 5.3E-02 5.0E-02 4.8E-02 7.8E-02 7.6E-02 7.5E-02 8.5E-03 9.8E-03 1.2E-02 8.1E-03 9.1E-03 9.8E-03 Glycylsarcosine 3.6E-03 N.D. 3.5E-03 5.2E-03 4.0E-03 N.D. 1.4E-03 N.D. 1.8E-03 1.2E-03 1.6E-03 N.D. Gln 7.7E+00 8.4E+00 8.4E+00 9.6E+00 9.5E+00 9.9E+00 2.7E+00 2.9E+00 3.0E+00 2.7E+00 2.6E+00 2.9E+00 Lys 1.4E+00 1.5E+00 1.5E+00 1.7E+00 1.7E+00 1.8E+00 5.9E-01 6.0E-01 6.0E-01 5.5E-01 5.6E-01 5.9E-01 2-Methylthiazolidine-4-carboxylic acid 8.3E-03 7.3E-03 6.9E-03 7.2E-03 7.3E-03 7.0E-03 2.1E-03 2.4E-03 1.7E-03 1.5E-03 2.1E-03 1.6E-03 Glu 1.6E+00 1.8E+00 1.8E+00 2.1E+00 2.0E+00 2.1E+00 1.1E+00 1.1E+00 1.1E+00 1.0E+00 1.1E+00 1.1E+00 N-Acetylserine 2.2E-03 N.D. N.D. N.D. 4.1E-03 5.3E-03 2.0E-03 2.1E-03 2.5E-03 1.6E-03 N.D. N.D. Met 5.0E-01 6.2E-01 6.4E-01 7.2E-01 7.1E-01 7.3E-01 2.7E-01 2.3E-01 2.8E-01 2.5E-01 2.5E-01 2.5E-01 Triethanolamine 1.1E-03 2.5E-03 3.3E-03 9.4E-04 N.D. 2.9E-03 8.7E-04 N.D. 9.5E-04 8.7E-04 9.2E-04 6.7E-04 γ-Glu-Arg_divalent 1.5E-03 2.1E-03 2.0E-03 3.0E-03 2.0E-03 2.2E-03 9.0E-04 9.2E-04 1.3E-03 1.1E-03 1.2E-03 1.4E-03 Xanthine 3.2E-02 2.8E-02 3.0E-02 3.3E-02 3.4E-02 3.7E-02 1.2E-02 1.5E-02 1.3E-02 1.2E-02 1.1E-02 1.2E-02 Dopamine" 2.6E-03 2.8E-03 3.6E-03 4.0E-03 2.1E-03 3.5E-03 1.2E-03 1.1E-03 1.1E-03 1.9E-03 1.7E-03 1.8E-03 His 6.7E-01 6.3E-01 7.3E-01 8.5E-01 8.3E-01 8.6E-01 3.0E-01 3.1E-01 2.9E-01 2.7E-01 2.8E-01 2.8E-01 N6-Methyllysine 1.3E-02 1.4E-02 1.2E-02 1.7E-02 1.5E-02 1.6E-02 5.5E-03 6.0E-03 4.8E-03 5.7E-03 6.0E-03 5.0E-03 O-Acetylhomoserine" 9.9E-03 1.1E-02 9.8E-03 1.1E-02 1.0E-02 1.1E-02 3.6E-03 3.5E-03 5.0E-03 4.3E-03 3.6E-03 3.6E-03 Carnitine 1.3E-01 1.3E-01 1.4E-01 1.7E-01 1.7E-01 1.8E-01 3.0E-02 2.9E-02 3.3E-02 2.9E-02 2.9E-02 2.8E-02 5-Hydroxylysine 2.9E-03 4.8E-03 3.7E-03 4.2E-03 4.4E-03 4.4E-03 1.6E-03 2.2E-03 1.6E-03 2.0E-03 1.9E-03 1.8E-03 S-Methylmethionine 1.1E-03 1.2E-03 1.4E-03 2.2E-03 1.4E-03 1.8E-03 5.4E-04 N.D. N.D. 4.6E-04 7.1E-04 N.D. Methionine sulfoxide 5.5E-02 4.8E-02 4.8E-02 6.1E-02 5.0E-02 5.4E-02 1.9E-02 2.0E-02 1.6E-02 1.7E-02 1.9E-02 1.7E-02 Phe 1.3E+00 1.4E+00 1.4E+00 1.6E+00 1.5E+00 1.6E+00 5.7E-01 5.6E-01 5.6E-01 5.3E-01 5.4E-01 5.4E-01 Pyridoxal N.D. N.D. N.D. 7.1E-04 N.D. 8.0E-04 5.7E-04 N.D. N.D. 4.1E-04 N.D. 7.1E-04 Pyridoxine 1.1E-01 1.1E-01 1.1E-01 1.3E-01 1.2E-01 1.3E-01 3.7E-02 3.9E-02 4.1E-02 3.7E-02 3.7E-02 3.6E-02 3-Methylhistidine" 5.5E-02 5.9E-02 5.8E-02 7.1E-02 6.1E-02 6.3E-02 2.2E-02 2.3E-02 2.5E-02 2.2E-02 2.3E-02 2.0E-02 N5-Ethylglutamine 2.8E-02 2.6E-02 2.6E-02 3.2E-02 2.8E-02 2.6E-02 1.3E-02 1.1E-02 1.1E-02 1.1E-02 1.1E-02 1.0E-02 Arg 6.9E+00 7.3E+00 6.6E+00 8.2E+00 8.4E+00 8.9E+00 2.6E+00 2.8E+00 2.7E+00 2.5E+00 2.6E+00 2.7E+00 Citrulline 6.1E-02 6.9E-02 7.3E-02 7.9E-02 7.7E-02 8.9E-02 2.9E-02 3.1E-02 3.1E-02 2.7E-02 2.9E-02 3.0E-02 Serotonin 1.1E-03 N.D. 9.9E-04 N.D. N.D. N.D. 1.1E-03 1.3E-03 1.2E-03 6.8E-04 9.8E-04 6.9E-04 Gluconolactone 3.2E-03 3.9E-03 3.4E-03 4.4E-03 4.2E-03 6.6E-03 N.D. N.D. N.D. N.D. 1.4E-03 N.D. Glucosamine 7.4E-03 9.6E-03 2.4E-02 1.1E-02 9.4E-03 2.6E-02 2.3E-03 2.0E-03 2.6E-03 1.8E-03 2.0E-03 2.4E-03 Tyr 8.5E-01 8.8E-01 8.3E-01 9.7E-01 9.1E-01 9.8E-01 3.5E-01 3.5E-01 3.5E-01 3.2E-01 3.4E-01 3.2E-01 Phosphorylcholine 6.2E-02 5.4E-02 6.4E-02 7.5E-02 7.4E-02 7.6E-02 4.3E-02 4.2E-02 4.3E-02 3.8E-02 4.1E-02 3.7E-02 N1-Acetylspermidine N.D. 1.5E-03 1.5E-03 2.3E-03 2.5E-03 2.2E-03 4.3E-03 4.2E-03 4.3E-03 7.1E-03 6.6E-03 7.6E-03 N-Acetyllysine" 4.1E-03 3.5E-03 4.5E-03 4.0E-03 N.D. 3.6E-03 N.D. N.D. N.D. 1.7E-03 N.D. N.D. Nω-Methylarginine 2.0E-03 N.D. N.D. 1.1E-03 N.D. N.D. 3.1E-04 N.D. N.D. N.D. N.D. N.D. Homoarginine 1.7E-02 1.7E-02 2.2E-02 2.3E-02 2.1E-02 2.4E-02 8.5E-03 8.5E-03 8.1E-03 8.0E-03 8.7E-03 7.5E-03 N6,N6,N6-Trimethyllysine 2.9E-02 3.1E-02 3.6E-02 3.4E-02 3.8E-02 3.7E-02 9.7E-03 1.0E-02 1.2E-02 8.9E-03 1.0E-02 9.5E-03 Homocitrulline 4.3E-03 4.3E-03 4.0E-03 4.0E-03 4.1E-03 4.4E-03 1.3E-03 1.6E-03 1.2E-03 1.2E-03 1.5E-03 1.3E-03 H-Asp(Gly-OH)-OH 1.6E-03 2.6E-03 2.5E-03 2.4E-03 2.6E-03 1.9E-03 N.D. N.D. N.D. N.D. N.D. N.D. γ-Carboxyglutamic acid 3.0E-03 2.0E-03 2.9E-03 2.6E-03 N.D. 2.1E-03 6.4E-04 N.D. N.D. N.D. N.D. 5.5E-04 11-Aminoundecanoic acid 1.6E-03 N.D. N.D. 5.1E-03 2.9E-03 3.5E-03 2.1E-03 1.8E-03 1.8E-03 1.9E-03 2.2E-03 2.5E-03 ADMA 8.8E-03 8.4E-03 1.0E-02 1.1E-02 8.6E-03 1.1E-02 2.6E-03 3.5E-03 3.3E-03 2.6E-03 2.6E-03 2.7E-03 SDMA 1.0E-02 9.1E-03 1.1E-02 1.2E-02 8.7E-03 1.1E-02 4.0E-03 3.2E-03 3.1E-03 3.7E-03 3.1E-03 2.6E-03 Spermine 5.3E-02 5.0E-02 5.5E-02 6.8E-02 6.5E-02 7.1E-02 1.2E-03 N.D. N.D. 1.2E-03 N.D. 1.1E-03 O-Acetylcarnitine 4.4E-02 4.6E-02 5.0E-02 5.6E-02 6.3E-02 7.2E-02 1.4E-02 1.6E-02 1.5E-02 1.3E-02 1.4E-02 1.5E-02 γ-Glu-Gly N.D. 1.9E-03 8.2E-04 1.3E-03 N.D. 1.5E-03 8.4E-04 N.D. N.D. 4.8E-04 N.D. 7.7E-04 Trp 2.1E-01 2.3E-01 2.2E-01 2.3E-01 2.6E-01 2.7E-01 8.6E-02 8.4E-02 8.3E-02 7.7E-02 8.0E-02 8.0E-02 Kynurenine 7.8E-03 7.4E-03 8.8E-03 8.4E-03 7.6E-03 7.9E-03 7.9E-03 6.7E-03 7.9E-03 8.9E-03 9.7E-03 8.7E-03 Glycerophosphorylethanolamine 2.1E-02 1.8E-02 2.0E-02 2.3E-02 2.3E-02 2.4E-02 6.3E-03 7.7E-03 7.2E-03 6.0E-03 7.5E-03 7.1E-03 Propionylcarnitine 1.6E-02 1.5E-02 1.8E-02 1.8E-02 1.9E-02 2.0E-02 4.0E-03 4.3E-03 4.2E-03 4.4E-03 4.3E-03 4.1E-03 N-Acetylmannosamine" 9.7E-03 6.8E-03 9.1E-03 1.2E-02 1.1E-02 8.7E-03 N.D. N.D. 3.1E-03 2.0E-03 N.D. 1.9E-03 Cystathionine 5.0E-03 5.7E-03 5.2E-03 6.5E-03 6.0E-03 6.6E-03 2.2E-03 2.3E-03 2.6E-03 2.2E-03 2.3E-03 2.6E-03 Carnosine 1.4E-02 1.2E-02 1.6E-02 1.8E-02 1.8E-02 1.8E-02 7.6E-03 6.2E-03 7.3E-03 6.9E-03 6.4E-03 6.2E-03 2'-Deoxycytidine 1.6E-03 2.0E-03 1.6E-03 2.6E-03 2.0E-03 2.8E-03 7.6E-04 6.4E-04 N.D. N.D. 6.5E-04 5.6E-04 Pro-Hyp 3.0E-02 2.3E-02 2.3E-02 2.6E-02 2.7E-02 2.4E-02 6.4E-03 5.8E-03 6.5E-03 6.1E-03 6.9E-03 7.2E-03 MG-H1 1.0E-03 N.D. N.D. 1.0E-03 N.D. N.D. 8.2E-04 N.D. N.D. 6.3E-04 6.8E-04 8.1E-04 Butyrylcarnitine" 5.6E-03 4.7E-03 5.8E-03 5.7E-03 5.4E-03 8.6E-03 2.1E-03 1.6E-03 N.D. 2.0E-03 N.D. N.D. γ-Glu-Ser N.D. N.D. N.D. 1.6E-03 N.D. 1.2E-03 N.D. N.D. N.D. 7.6E-04 N.D. 8.6E-04 N’-Formylkynurenine N.D. N.D. 1.6E-03 1.1E-03 1.6E-03 1.2E-03 1.6E-03 1.3E-03 1.2E-03 2.2E-03 1.8E-03 2.1E-03 N-(1-Deoxy-1-fructosyl)glycine 5.7E-03 6.8E-03 6.2E-03 5.9E-03 6.9E-03 8.7E-03 1.4E-03 N.D. N.D. N.D. 1.1E-03 N.D. Cystine 6.1E-01 6.1E-01 6.1E-01 6.9E-01 7.2E-01 7.1E-01 2.6E-01 3.0E-01 2.9E-01 2.5E-01 2.6E-01 2.6E-01 Thymidine 4.7E-03 N.D. 5.9E-03 5.1E-03 5.5E-03 6.1E-03 1.6E-03 N.D. N.D. 1.5E-03 N.D. 1.7E-03 Cytidine 1.5E-02 1.4E-02 1.4E-02 1.5E-02 1.3E-02 1.6E-02 3.7E-03 3.5E-03 3.7E-03 3.2E-03 3.6E-03 3.1E-03 Uridine 2.2E-02 1.8E-02 1.9E-02 2.5E-02 2.1E-02 2.1E-02 3.6E-03 4.0E-03 4.0E-03 3.2E-03 3.2E-03 4.0E-03 Isovalerylcarnitine 2.5E-03 2.2E-03 N.D. N.D. N.D. N.D. N.D. N.D. N.D. N.D. 1.5E-03 N.D. γ-Glu-Val 4.7E-03 4.5E-03 4.2E-03 4.7E-03 3.3E-03 4.6E-03 1.8E-03 1.3E-03 1.8E-03 1.6E-03 1.1E-03 1.5E-03 γ-Glu-Thr N.D. N.D. N.D. N.D. N.D. N.D. 6.4E-04 N.D. N.D. N.D. N.D. N.D. 2'-O-Methylcytidine N.D. N.D. N.D. N.D. 1.6E-03 N.D. 5.4E-04 N.D. N.D. N.D. N.D. N.D. Glycerophosphocholine 7.6E-02 4.6E-02 6.8E-02 7.2E-02 6.2E-02 6.3E-02 2.3E-02 2.5E-02 2.9E-02 2.8E-02 2.8E-02 2.5E-02 γ-Glu-Leu" 4.6E-03 4.7E-03 4.8E-03 5.4E-03 4.1E-03 4.4E-03 2.4E-03 2.5E-03 2.9E-03 1.8E-03 1.9E-03 2.1E-03 Thiamine 4.2E-02 3.6E-02 3.3E-02 3.5E-02 4.0E-02 3.8E-02 6.6E-03 1.1E-02 9.9E-03 6.4E-03 6.5E-03 7.2E-03 Adenosine 1.8E-03 2.2E-03 2.7E-03 1.8E-03 1.4E-03 1.7E-03 1.1E-03 1.5E-03 1.0E-03 8.9E-04 1.2E-03 1.1E-03 Inosine 2.8E-03 2.1E-03 1.8E-03 3.7E-03 4.7E-03 4.0E-03 N.D. N.D. N.D. 8.0E-04 N.D. N.D. γ-Glu-Gln 1.2E-02 1.1E-02 1.4E-02 1.2E-02 1.4E-02 1.4E-02 5.4E-03 5.8E-03 4.9E-03 4.4E-03 6.0E-03 3.8E-03 γ-Glu-Glu N.D. 1.3E-03 1.8E-03 1.3E-03 N.D. N.D. 1.1E-03 8.1E-04 N.D. 5.4E-04 9.7E-04 9.6E-04 N-(1-Deoxy-1-fructosyl)valine 1.7E-02 2.3E-02 2.0E-02 1.6E-02 1.6E-02 2.5E-02 2.8E-03 2.6E-03 4.5E-03 2.4E-03 2.7E-03 2.5E-03 N-(1-Deoxy-1-fructosyl)threonine 6.7E-03 1.0E-02 8.7E-03 7.1E-03 6.7E-03 9.1E-03 8.2E-04 N.D. N.D. N.D. N.D. 7.7E-04 Gly-Pro-Hyp 1.4E-03 1.9E-03 1.6E-03 1.9E-03 N.D. 1.6E-03 N.D. N.D. N.D. 5.0E-04 N.D. N.D. Ophthalmic acid N.D. N.D. N.D. 1.2E-03 1.5E-03 N.D. N.D. N.D. N.D. N.D. N.D. N.D. Argininosuccinic acid 5.8E-03 4.1E-03 4.6E-03 6.8E-03 5.1E-03 4.4E-03 2.3E-03 2.5E-03 2.1E-03 2.1E-03 2.5E-03 1.9E-03 N-(1-Deoxy-1-fructosyl)leucine 4.8E-02 7.9E-02 7.8E-02 5.5E-02 5.9E-02 8.7E-02 1.2E-02 9.9E-03 1.6E-02 8.3E-03 1.0E-02 9.9E-03 Streptomycin sulfate_+H2O_divalent 6.0E-01 6.5E-01 6.6E-01 6.5E-01 6.6E-01 7.4E-01 5.2E-02 5.2E-02 5.5E-02 3.6E-02 3.7E-02 3.6E-02 Glutathione (GSSG)_divalent 1.9E-02 1.8E-02 2.3E-02 3.0E-02 3.0E-02 2.8E-02 6.6E-03 5.9E-03 6.3E-03 9.1E-03 8.9E-03 7.3E-03 e-Fructoselysine 2.0E-02 3.8E-02 3.1E-02 1.7E-02 2.2E-02 3.4E-02 3.6E-03 2.4E-03 3.8E-03 2.3E-03 2.9E-03 3.1E-03 Fructosyllysine 1.1E-02 2.0E-02 1.9E-02 1.2E-02 1.3E-02 2.0E-02 2.4E-03 2.3E-03 2.3E-03 1.7E-03 1.4E-03 2.3E-03 Riboflavin N.D. N.D. N.D. 1.8E-03 N.D. N.D. N.D. N.D. N.D. N.D. N.D. N.D. S-Adenosylmethionine 6.6E-04 N.D. N.D. N.D. N.D. N.D. 7.0E-04 N.D. N.D. 7.2E-04 N.D. 8.5E-04 Cysteine glutathione disulfide 1.1E-01 1.0E-01 1.1E-01 1.5E-01 1.3E-01 1.3E-01 3.7E-02 3.6E-02 4.0E-02 4.1E-02 4.4E-02 4.5E-02 Folic acid 3.5E-03 3.3E-03 3.4E-03 3.6E-03 3.0E-03 3.7E-03 1.4E-03 1.2E-03 N.D. 9.0E-04 1.4E-03 1.1E-03 CDP-ethanolamine 3.5E-03 2.5E-03 4.3E-03 4.6E-03 4.5E-03 4.3E-03 N.D. N.D. N.D. N.D. N.D. N.D. MS_METABOLITE_DATA_END #METABOLITES METABOLITES_START metabolite_name Urea Ethanolamine Gly Trimethylamine N-oxide Piperidine Morpholine Putrescine β-Ala Ala Sarcosine 2-Amino-2-methyl-1-propanol Dimethylaminoethanol Glycerol N,N-Dimethylglycine GABA 2-Aminobutyric acid" 3-Aminoisobutyric acid Choline Ser Diethanolamine Hypotaurine Histamine Uracil Creatinine 3-Amino-2-piperidone Pro Guanidoacetic acid Betaine Val Thr 2-Methylserine 4-Hydroxyphenethyl alcohol_-H2O Homocarnosine_divalent" 2-Amino-2-(hydroxymethyl)-1,3-propanediol Nicotinamide" Taurine Phloroglucinol 5-Amino-3,4-dihydro-2H-pyrrole-2-carboxylic acid 4-Oxopyrrolidine-2-carboxylic acid 1-Aminocyclopentanecarboxylic acid Pipecolic acid Hydroxyproline Creatine Ile Leu Asn Ornithine Thiaproline Asp Acetanilide Hypoxanthine p-Aminobenzoic acid Urocanic acid 1H-Imidazole-4-propionic acid 1-Methyl-4-imidazoleacetic acid Crotonic acid betaine Stachydrine 4-Guanidinobutyric acid γ-Butyrobetaine Spermidine Glycylsarcosine Gln Lys 2-Methylthiazolidine-4-carboxylic acid Glu N-Acetylserine Met Triethanolamine γ-Glu-Arg_divalent Xanthine Dopamine" His N6-Methyllysine O-Acetylhomoserine" Carnitine 5-Hydroxylysine S-Methylmethionine Methionine sulfoxide Phe Pyridoxal Pyridoxine 3-Methylhistidine" N5-Ethylglutamine Arg Citrulline Serotonin Gluconolactone Glucosamine Tyr Phosphorylcholine N1-Acetylspermidine N-Acetyllysine" Nω-Methylarginine Homoarginine N6,N6,N6-Trimethyllysine Homocitrulline H-Asp(Gly-OH)-OH γ-Carboxyglutamic acid 11-Aminoundecanoic acid ADMA SDMA Spermine O-Acetylcarnitine γ-Glu-Gly Trp Kynurenine Glycerophosphorylethanolamine Propionylcarnitine N-Acetylmannosamine" Cystathionine Carnosine 2'-Deoxycytidine Pro-Hyp MG-H1 Butyrylcarnitine" γ-Glu-Ser N’-Formylkynurenine N-(1-Deoxy-1-fructosyl)glycine Cystine Thymidine Cytidine Uridine Isovalerylcarnitine γ-Glu-Val γ-Glu-Thr 2'-O-Methylcytidine Glycerophosphocholine γ-Glu-Leu" Thiamine Adenosine Inosine γ-Glu-Gln γ-Glu-Glu N-(1-Deoxy-1-fructosyl)valine N-(1-Deoxy-1-fructosyl)threonine Gly-Pro-Hyp Ophthalmic acid Argininosuccinic acid N-(1-Deoxy-1-fructosyl)leucine Streptomycin sulfate_+H2O_divalent Glutathione (GSSG)_divalent e-Fructoselysine Fructosyllysine Riboflavin S-Adenosylmethionine Cysteine glutathione disulfide Folic acid CDP-ethanolamine METABOLITES_END #END