#METABOLOMICS WORKBENCH msekiya_20250728_212836 DATATRACK_ID:6225 STUDY_ID:ST004082 ANALYSIS_ID:AN006760 PROJECT_ID:PR002563 VERSION 1 CREATED_ON July 30, 2025, 7:45 am #PROJECT PR:PROJECT_TITLE IMR90 cells treated with exosomes with or without CtBP2 PR:PROJECT_SUMMARY We prepared two types of MEF (mouse embryonic fibroblast) cells: one is cells PR:PROJECT_SUMMARY with wild-type CtBP2-HA knock-in and the other is cells with CtBP2 mutant-HA PR:PROJECT_SUMMARY knock-in. The latter does not secrete CtBP2 in exosomes. We isolated exosomes PR:PROJECT_SUMMARY from these cells and treated IMR90 fibroblasts (WT and Mut, respectively). PR:INSTITUTE University of Tsukuba PR:LAST_NAME Sekiya PR:FIRST_NAME Motohiro PR:ADDRESS 1-1-1 Tennodai, Tsukuba, Ibaraki, 3058575, Japan PR:EMAIL msekiya@md.tsukuba.ac.jp PR:PHONE +81-29-853-3053 #STUDY ST:STUDY_TITLE The secreted metabolite sensor CtBP2 links metabolism to healthy lifespan ST:STUDY_SUMMARY While metabolic homeostasis is coordinated by metabolite-sensing molecules ST:STUDY_SUMMARY within a cell, their roles in horizontal regulation across cells remain ST:STUDY_SUMMARY underexplored. Here, we describe a system regulated by a metabolite sensor ST:STUDY_SUMMARY CtBP2. CtBP2 is secreted via exosomes in response to reductive metabolism, which ST:STUDY_SUMMARY is suppressed by oxidative stress. A series of pro-longevity agents induce CtBP2 ST:STUDY_SUMMARY secretion, and administration of exosomal CtBP2 extends lifespan of aged mice. ST:STUDY_SUMMARY Consistently, serum CtBP2 concentrations are higher in human subjects from ST:STUDY_SUMMARY families with a history of longevity and exhibit an age-dependent decline. ST:STUDY_SUMMARY Healthspan is also improved by exosomal CtBP2, as exemplified by protection ST:STUDY_SUMMARY against frailty in mice and negative associations between serum CtBP2 levels and ST:STUDY_SUMMARY cardiovascular diseases in humans. These health benefits could be attributed to ST:STUDY_SUMMARY the proper channeling of reducing equivalents into a chain of activation of ST:STUDY_SUMMARY CYB5R3 and AMPK. Our findings illustrate a previously uncharacterized metabolic ST:STUDY_SUMMARY system that provides insights into the regulation of human health and holds ST:STUDY_SUMMARY promise for future clinical applications. ST:INSTITUTE University of Tsukuba ST:LAST_NAME Sekiya ST:FIRST_NAME Motohiro ST:ADDRESS 1-1-1 Tennodai, Tsukuba, Ibaraki, 3058575, Japan ST:EMAIL msekiya@md.tsukuba.ac.jp ST:PHONE +81298533053 #SUBJECT SU:SUBJECT_TYPE Cultured cells SU:SUBJECT_SPECIES Homo sapiens SU:TAXONOMY_ID 9606 #SUBJECT_SAMPLE_FACTORS: SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Raw file names and additional sample data SUBJECT_SAMPLE_FACTORS - WT-1 Group:WT | Sample source:IMR90 fibroblasts RAW_FILE_NAME(Raw data(positive))=TSUUY09101_C_20240802_004_d1.mzML; RAW_FILE_NAME(Raw data(negative))=TSUUY09101_A_20240802_004_d2.mzML SUBJECT_SAMPLE_FACTORS - WT-2 Group:WT | Sample source:IMR90 fibroblasts RAW_FILE_NAME(Raw data(positive))=TSUUY09101_C_20240802_005_d1.mzML; RAW_FILE_NAME(Raw data(negative))=TSUUY09101_A_20240802_005_d2.mzML SUBJECT_SAMPLE_FACTORS - WT-3 Group:WT | Sample source:IMR90 fibroblasts RAW_FILE_NAME(Raw data(positive))=TSUUY09101_C_20240802_006_d1.mzML; RAW_FILE_NAME(Raw data(negative))=TSUUY09101_A_20240802_006_d2.mzML SUBJECT_SAMPLE_FACTORS - Mut-1 Group:Mut | Sample source:IMR90 fibroblasts RAW_FILE_NAME(Raw data(positive))=TSUUY09101_C_20240802_007_d1.mzML; RAW_FILE_NAME(Raw data(negative))=TSUUY09101_A_20240802_007_d2.mzML SUBJECT_SAMPLE_FACTORS - Mut-2 Group:Mut | Sample source:IMR90 fibroblasts RAW_FILE_NAME(Raw data(positive))=TSUUY09101_C_20240802_008_d1.mzML; RAW_FILE_NAME(Raw data(negative))=TSUUY09101_A_20240802_008_d2.mzML SUBJECT_SAMPLE_FACTORS - Mut-3 Group:Mut | Sample source:IMR90 fibroblasts RAW_FILE_NAME(Raw data(positive))=TSUUY09101_C_20240802_009_d1.mzML; RAW_FILE_NAME(Raw data(negative))=TSUUY09101_A_20240802_009_d2.mzML #COLLECTION CO:COLLECTION_SUMMARY We identified an anti-aging effect of CtBP2 in exosomes. To investigate the CO:COLLECTION_SUMMARY mechanistic insights behind this, we decided to treat IMR90 fibroblasts with CO:COLLECTION_SUMMARY exosomes with or without CtBP2. Since we revealed that CtBP2 mutant lacking the CO:COLLECTION_SUMMARY metabolite sensing pocket cannot be secreted via exosomes, we prepared two types CO:COLLECTION_SUMMARY of MEF cells: one is cells with wild-type CtBP2-HA knock-in and the other is CO:COLLECTION_SUMMARY cells with the CtBP2 mutant-HA knock-in. We isolated exosomes from these cells CO:COLLECTION_SUMMARY and treated IMR90 fibroblasts for 1.5 days. Exosomes from MEF cells with CO:COLLECTION_SUMMARY wild-type CtBP2-HA knock-in contain CtBP2, and exosomes from those with mutant CO:COLLECTION_SUMMARY CtBP2-HA knock-in does not. WT and Mut denote metabolites extracted from IMR90 CO:COLLECTION_SUMMARY cells treated with exosomes with and without CtBP2, respectively. CO:SAMPLE_TYPE Fibroblast cells #TREATMENT TR:TREATMENT_SUMMARY IMR90 fibroblast cells were treated with exosomes with or without CtBP2, for 1.5 TR:TREATMENT_SUMMARY days in DMEM 10% exosome-free fetal bovine serum. #SAMPLEPREP SP:SAMPLEPREP_SUMMARY Culture medium was aspirated from the dish, and the cells were washed twice with SP:SAMPLEPREP_SUMMARY 5% mannitol solution (10 mL and 2 mL for the first and second wash, SP:SAMPLEPREP_SUMMARY respectively). The cells were then treated with 800 µL of methanol and SP:SAMPLEPREP_SUMMARY incubated at room temperature for 30 sec to suppress enzyme activity. Next, 550 SP:SAMPLEPREP_SUMMARY µL of Milli-Q water containing internal standards (H3304-1002, Human Metabolome SP:SAMPLEPREP_SUMMARY Technologies, Inc. (HMT), Tsuruoka, Yamagata, Japan) was added to the cell SP:SAMPLEPREP_SUMMARY extract, followed by further incubation at room temperature for 30 sec. The cell SP:SAMPLEPREP_SUMMARY extract was then centrifuged at 2,300 ×g, 4ºC for 5 min, after which 700 µL SP:SAMPLEPREP_SUMMARY of the supernatant was centrifugally filtered through a Millipore 5-kDa cutoff SP:SAMPLEPREP_SUMMARY filter (UltrafreeMC-PLHCC, HMT) at 9,100 ×g, 4ºC for 120 min to remove SP:SAMPLEPREP_SUMMARY macromolecules. Subsequently, the filtrate was evaporated to dryness under SP:SAMPLEPREP_SUMMARY vacuum and reconstituted in 50 µL of Milli-Q water for metabolome analysis at SP:SAMPLEPREP_SUMMARY HMT. #CHROMATOGRAPHY CH:CHROMATOGRAPHY_TYPE CE CH:INSTRUMENT_NAME Agilent 7100 CE CH:COLUMN_NAME Fused silica capillary (80 cm x 50 um) CH:SOLVENT_A Anion Buffer Solution (p/n:I3302-1023) CH:SOLVENT_B N/A CH:FLOW_GRADIENT N/A CH:FLOW_RATE N/A CH:COLUMN_TEMPERATURE N/A #ANALYSIS AN:ANALYSIS_TYPE MS #MS MS:INSTRUMENT_NAME Thermo Q Exactive Plus Orbitrap MS:INSTRUMENT_TYPE Orbitrap MS:MS_TYPE ESI MS:ION_MODE NEGATIVE MS:MS_COMMENTS CE-HRMS(omega) Negative (Anion) mode #MS_METABOLITE_DATA MS_METABOLITE_DATA:UNITS arbitrary unit MS_METABOLITE_DATA_START Samples WT-1 WT-2 WT-3 Mut-1 Mut-2 Mut-3 Factors Group:WT | Sample source:IMR90 fibroblasts Group:WT | Sample source:IMR90 fibroblasts Group:WT | Sample source:IMR90 fibroblasts Group:Mut | Sample source:IMR90 fibroblasts Group:Mut | Sample source:IMR90 fibroblasts Group:Mut | Sample source:IMR90 fibroblasts Glyoxylic acid 8.8E-04 N.D. N.D. 1.0E-03 5.5E-04 1.1E-03 Propionic acid N.D. N.D. N.D. N.D. N.D. N.D. Glycolic acid 4.4E-03 5.6E-03 5.2E-03 N.D. 5.5E-03 4.5E-03 Pyruvic acid 1.3E-02 1.1E-02 N.D. N.D. N.D. 1.1E-02 Isobutyric acid" N.D. 3.8E-03 N.D. 2.6E-03 3.6E-03 3.0E-03 Oxamic acid N.D. N.D. N.D. N.D. 4.2E-04 N.D. Lactic acid 4.3E+00 5.0E+00 4.4E+00 3.4E+00 3.4E+00 3.2E+00 Phenol 2.2E-02 2.3E-02 2.4E-02 2.0E-02 2.3E-02 2.3E-02 2-Hydroxypyridine 1.2E-03 3.1E-03 3.2E-03 1.2E-03 2.7E-03 1.7E-03 Valeric acid" 4.7E-03 7.3E-03 6.0E-03 5.6E-03 6.2E-03 5.3E-03 N-Formylglycine 7.3E-04 2.9E-04 9.6E-04 4.3E-04 2.1E-03 4.3E-04 2-Hydroxybutyric acid N.D. N.D. N.D. N.D. N.D. N.D. 3-Hydroxybutyric acid 1.8E-02 1.7E-02 1.5E-02 1.5E-02 1.4E-02 1.3E-02 Glyceric acid 3.5E-03 4.8E-03 5.1E-03 3.2E-03 4.5E-03 3.6E-03 Fumaric acid 9.0E-02 9.6E-02 8.9E-02 7.0E-02 8.5E-02 7.0E-02 Maleic acid N.D. 7.2E-04 N.D. N.D. N.D. N.D. 4-Oxovaleric acid 3.0E-03 4.0E-03 3.7E-03 2.7E-03 4.3E-03 2.7E-03 2-Oxoisovaleric acid 1.1E-02 3.3E-02 2.5E-02 1.0E-02 1.6E-02 9.4E-03 4-Methylpentanoic acid" 7.6E-03 8.0E-03 7.5E-03 7.2E-03 9.0E-03 7.3E-03 N-Acetylglycine 2.2E-03 1.9E-03 2.1E-03 1.9E-03 2.3E-03 1.9E-03 Succinic acid 3.9E-02 5.4E-02 5.6E-02 3.4E-02 3.9E-02 4.0E-02 2-Hydroxyisovaleric acid-1" 9.7E-03 9.7E-03 9.3E-03 7.8E-03 8.6E-03 7.8E-03 2-Hydroxyisovaleric acid-2" 2.7E-03 2.6E-03 2.5E-03 1.9E-03 1.7E-03 1.6E-03 5-Hydroxypentanoic acid" 2.8E-04 3.8E-04 3.6E-04 N.D. 8.7E-04 2.5E-04 2-Ethylhydracrylic acid-2 1.0E-03 1.1E-03 8.5E-04 9.6E-04 1.0E-03 9.5E-04 Benzoic acid 3.4E-03 3.8E-03 3.1E-03 3.0E-03 4.6E-03 2.4E-03 Isethionic acid 1.6E-03 1.9E-03 2.0E-03 2.1E-03 6.9E-03 1.3E-03 5-Oxoproline 8.4E-01 9.1E-01 9.6E-01 6.9E-01 6.9E-01 6.9E-01 Citraconic acid 5.8E-03 6.7E-03 N.D. 5.0E-03 N.D. N.D. 4-Oxohexanoic acid" 2.7E-03 2.4E-03 2.6E-03 N.D. 2.8E-03 2.6E-03 2-Oxohexanoic acid" 1.4E-01 2.2E-01 1.7E-01 1.0E-01 1.2E-01 9.4E-02 Heptanoic acid N.D. 4.8E-03 4.9E-03 N.D. 6.2E-03 4.8E-03 N-Acetyl- -alanine" 3.3E-02 3.1E-02 3.0E-02 2.8E-02 2.9E-02 2.7E-02 Methylsuccinic acid" 3.1E-03 4.1E-03 3.8E-03 3.6E-03 4.2E-03 4.4E-03 2-Hydroxy-3-methylvaleric acid" 1.3E-03 1.3E-03 1.3E-03 1.0E-03 1.3E-03 8.2E-04 3-Hydroxyhexanoic acid" 4.7E-04 3.8E-04 N.D. 3.8E-04 1.8E-04 1.9E-04 Iminodiacetic acid 1.6E-03 1.9E-03 3.5E-03 1.3E-03 2.1E-03 1.8E-03 Malic acid 2.0E+00 1.8E+00 1.8E+00 1.9E+00 1.9E+00 1.8E+00 Threonic acid 1.1E-01 1.1E-01 1.0E-01 1.2E-01 1.1E-01 1.1E-01 m-Toluic acid" 1.9E-02 1.8E-02 1.9E-02 2.2E-02 2.2E-02 2.1E-02 4-Hydroxyphenylacetaldehyde 9.4E-03 9.2E-03 9.3E-03 5.7E-03 8.2E-03 6.9E-03 o-Hydroxybenzoic acid 6.2E-04 2.3E-04 5.5E-04 5.4E-04 1.0E-03 4.0E-04 p-Hydroxybenzoic acid" N.D. 4.6E-04 3.3E-04 N.D. 3.7E-04 N.D. 6-Hydroxynicotinic acid N.D. 7.9E-04 N.D. N.D. 1.7E-03 N.D. Ethanolamine phosphate 8.5E-02 9.1E-02 1.0E-01 7.6E-02 1.4E-01 1.6E-01 5-Hydroxymethyluracil 2.9E-03 2.6E-03 2.6E-03 N.D. 1.3E-03 1.5E-03 Octanoic acid-2 5.5E-03 6.3E-03 5.1E-03 4.7E-03 9.5E-03 4.8E-03 Octanoic acid-1" 2.7E-03 N.D. N.D. 2.8E-03 3.2E-03 N.D. N-Propionylalanine-1" 3.6E-04 6.7E-04 5.1E-04 4.2E-04 1.2E-03 3.7E-04 Isobutyrylglycine" 1.2E-03 1.8E-03 2.1E-03 1.9E-03 3.8E-03 1.5E-03 2-Oxoglutaric acid 9.6E-02 1.5E-01 1.1E-01 8.8E-02 9.4E-02 8.3E-02 2-Methylglutaric acid" N.D. N.D. N.D. N.D. 5.0E-03 N.D. 3-Ureidoisobutyric acid N.D. N.D. N.D. N.D. N.D. N.D. 2-Hydroxyglutaric acid 7.0E-02 6.7E-02 6.4E-02 6.2E-02 5.7E-02 5.6E-02 Citramalic acid 1.7E-03 3.0E-03 3.8E-03 1.7E-03 N.D. N.D. Mevalonic acid 8.7E-04 1.1E-03 1.1E-03 1.0E-03 5.5E-03 5.9E-04 Pantoic acid 3.5E-04 1.1E-03 1.0E-03 1.1E-03 8.5E-04 2.2E-04 Tartaric acid N.D. 1.5E-03 1.5E-03 1.9E-03 1.8E-03 1.5E-03 2-Deoxyribonic acid-2 1.1E-03 4.4E-03 2.0E-03 1.3E-03 N.D. 2.1E-03 2-Deoxyribonic acid-1 N.D. 2.5E-04 3.9E-04 N.D. 1.6E-04 N.D. 3-Phenylpropionic acid 3.9E-03 5.4E-03 5.2E-03 3.5E-03 6.0E-03 3.5E-03 2-(Hydroxymethyl)benzoic acid" 1.4E-03 1.2E-03 1.2E-03 1.7E-03 2.2E-03 1.4E-03 Cysteinesulfinic acid 2.6E-02 2.6E-02 2.6E-02 2.3E-02 2.7E-02 2.6E-02 Phosphoglycolic acid 4.8E-04 N.D. 4.4E-04 5.2E-04 N.D. 5.4E-04 Orotic acid 8.9E-04 1.1E-03 9.0E-04 4.0E-04 4.1E-04 3.4E-04 Dihydroorotic acid 7.5E-04 8.5E-04 7.2E-04 N.D. 4.2E-04 3.5E-04 Succinylacetone N.D. 2.5E-04 N.D. N.D. 5.5E-04 N.D. Pelargonic acid 2.1E-02 2.1E-02 1.8E-02 2.0E-02 3.6E-02 1.7E-02 2-Methylbutyrylglycine-1" 1.1E-03 1.2E-03 1.2E-03 1.1E-03 1.2E-03 1.1E-03 2-Methylbutyrylglycine-2 N.D. 2.9E-04 1.2E-04 N.D. 2.3E-04 1.2E-04 3-Methyladipic acid" 6.8E-04 7.9E-04 N.D. 3.7E-04 1.3E-03 N.D. 3-Hydroxyoctanoic acid-2" 4.9E-04 5.4E-04 5.1E-04 4.1E-04 3.4E-04 4.4E-04 3-Hydroxyoctanoic acid-1" 5.6E-04 4.9E-04 6.7E-04 N.D. 9.1E-04 N.D. Indole-3-carboxylic acid 5.7E-04 1.4E-04 2.3E-04 3.1E-04 2.3E-04 N.D. N-Acetylthreonine 1.3E-02 1.2E-02 1.2E-02 1.3E-02 1.3E-02 1.3E-02 3-Hydroxy-3-methylglutaric acid 2.7E-02 2.7E-02 2.4E-02 2.6E-02 2.4E-02 2.3E-02 2-Hydroxyadipic acid 1.8E-03 1.8E-03 N.D. N.D. N.D. N.D. N-Acetylcysteine 4.5E-03 5.9E-03 4.4E-03 3.7E-03 3.3E-03 2.8E-03 Phenylpyruvic acid 6.8E-04 N.D. N.D. 6.9E-04 3.6E-04 5.1E-04 N-Formylanthranilic acid 4.6E-04 2.2E-04 4.5E-04 2.1E-04 2.0E-04 N.D. Phthalic acid 2.0E-03 1.6E-03 N.D. 1.4E-03 4.6E-03 1.2E-03 Terephthalic acid 2.2E-03 2.0E-03 N.D. 2.2E-03 2.1E-03 2.0E-03 Arabinonic acid 8.3E-04 1.3E-03 1.3E-03 9.5E-04 1.1E-03 7.3E-04 p-Methoxyphenylacetic acid" 3.9E-04 1.7E-04 2.1E-04 N.D. 1.3E-04 N.D. N-Acetyltaurine 2.2E-02 2.0E-02 1.9E-02 2.6E-02 2.3E-02 2.5E-02 Phosphoenolpyruvic acid 2.0E-02 1.9E-02 1.7E-02 1.7E-02 1.8E-02 1.4E-02 Uric acid 8.6E-03 9.9E-03 8.6E-03 7.2E-03 7.6E-03 6.9E-03 Cysteic acid 9.5E-04 7.9E-04 9.5E-04 1.2E-03 1.2E-03 1.2E-03 Glyceraldehyde 3-phosphate 7.5E-04 2.2E-03 1.0E-03 2.7E-04 7.0E-04 2.0E-04 Dihydroxyacetone phosphate 3.5E-02 1.4E-01 1.2E-01 3.3E-02 7.1E-02 3.5E-02 Glycerol 2-phosphate 6.3E-03 2.1E-04 4.5E-04 4.1E-03 1.5E-03 4.8E-03 Glycerol 3-phosphate 1.9E-01 1.6E-01 1.6E-01 1.8E-01 1.7E-01 1.8E-01 Decanoic acid 1.4E-02 1.4E-02 1.4E-02 1.2E-02 2.9E-02 1.2E-02 N-Hexanoylglycine" 9.5E-04 8.7E-04 9.8E-04 6.6E-04 1.1E-03 8.4E-04 Phenol sulphate 1.3E-03 1.1E-03 9.3E-04 1.5E-03 1.7E-03 1.3E-03 p-Phenolsulfonic acid 6.6E-04 8.2E-04 8.2E-04 6.7E-04 9.7E-04 5.5E-04 cis-Aconitic acid 1.9E-01 1.8E-01 1.8E-01 1.8E-01 1.6E-01 1.7E-01 N-Acetylasparagine 2.7E-03 3.2E-03 2.8E-03 2.5E-03 2.6E-03 3.1E-03 Suberic acid 1.9E-03 1.7E-03 2.8E-03 1.0E-03 3.5E-03 1.2E-03 N-Acetylaspartic acid 3.6E-02 3.7E-02 3.3E-02 4.4E-02 4.3E-02 3.8E-02 Glucurone 1.9E-01 1.5E-01 1.7E-01 1.3E-01 2.2E-01 1.7E-01 "1,2,3-Propanetricarboxylic acid" N.D. 2.0E-04 N.D. N.D. N.D. N.D. N-Carbamoylaspartic acid 1.1E-02 1.1E-02 1.1E-02 4.6E-03 4.4E-03 4.7E-03 N-Formylmethionine 3.7E-03 3.5E-03 3.1E-03 3.0E-03 3.4E-03 2.9E-03 Hippuric acid N.D. 8.9E-05 5.6E-04 N.D. N.D. N.D. Caffeic acid" N.D. 1.3E-04 N.D. N.D. 3.3E-04 4.4E-04 Hydroxyphenyllactic acid" 1.0E-02 1.1E-02 1.1E-02 8.9E-03 7.3E-03 7.7E-03 Homocysteic acid 6.4E-04 5.4E-04 6.1E-04 7.5E-04 6.8E-04 4.7E-04 3-Methoxy-4-hydroxyphenylethyleneglycol 5.9E-03 5.1E-03 6.9E-03 3.3E-03 5.3E-03 4.6E-03 O-Phosphoserine 9.5E-03 8.9E-03 1.0E-02 1.3E-02 1.1E-02 1.2E-02 2-Phosphoglyceric acid 7.0E-03 7.4E-03 7.3E-03 5.4E-03 6.1E-03 6.9E-03 3-Phosphoglyceric acid 4.1E-02 4.0E-02 4.0E-02 3.4E-02 3.6E-02 3.6E-02 Undecanoic acid 2.6E-03 2.1E-03 2.3E-03 2.2E-03 3.8E-03 2.2E-03 p-Cresol sulfate 6.0E-03 8.2E-03 7.5E-03 5.3E-03 6.1E-03 5.7E-03 N-Acetylglutamine 3.3E-03 2.8E-03 3.2E-03 3.2E-03 3.3E-03 3.2E-03 Azelaic acid 3.9E-03 5.2E-03 7.7E-03 2.2E-03 6.3E-03 2.6E-03 3-Hydroxydecanoic acid" 5.7E-04 5.3E-04 6.4E-04 4.4E-04 8.9E-04 4.9E-04 Indole-3-glyoxylic acid 2.3E-04 N.D. 2.4E-04 N.D. N.D. N.D. N-Acetylglutamic acid 1.6E-02 1.7E-02 1.6E-02 1.7E-02 1.7E-02 1.5E-02 "2,4-Dichlorobenzoic acid" N.D. N.D. 2.4E-04 N.D. 3.8E-04 N.D. N-Acetylmethionine 3.4E-02 2.9E-02 2.9E-02 2.4E-02 2.3E-02 2.4E-02 Citric acid 2.7E+00 2.6E+00 2.4E+00 2.4E+00 2.4E+00 2.3E+00 Isocitric acid 1.8E-01 1.7E-01 1.7E-01 1.7E-01 1.6E-01 1.6E-01 Quinic acid 4.7E-04 1.4E-03 1.9E-03 3.1E-04 9.5E-04 1.2E-03 Phenaceturic acid" 2.3E-03 2.5E-03 1.9E-03 2.0E-03 2.1E-03 1.5E-03 Glucuronic acid" 3.7E-03 4.2E-03 4.2E-03 2.5E-03 3.4E-03 2.4E-03 Gluconic acid 1.2E-01 1.1E-01 1.0E-01 9.6E-02 9.6E-02 9.0E-02 Lauric acid 7.1E-02 5.9E-02 6.0E-02 6.3E-02 7.0E-02 6.1E-02 Capryloylglycine N.D. 1.6E-03 1.8E-03 1.7E-04 6.0E-04 4.7E-04 p-Sulfobenzoic acid N.D. N.D. 1.8E-04 N.D. 4.2E-04 N.D. Sebacic acid 2.6E-04 8.5E-04 1.3E-03 3.3E-04 1.3E-03 N.D. 5-Methoxyindoleacetic acid" 6.7E-04 5.4E-04 4.2E-04 N.D. N.D. N.D. Phenylpropionylglycine" N.D. N.D. N.D. 2.2E-04 1.2E-04 2.2E-04 p-Hydroxyphenylacetylglycine N.D. 3.7E-04 3.1E-04 N.D. 3.4E-04 N.D. Glucaric acid 2.7E-03 2.9E-03 2.4E-03 2.2E-03 2.6E-03 2.1E-03 Mucic acid 5.5E-03 6.6E-03 5.7E-03 4.9E-03 5.0E-03 3.9E-03 Phosphocreatine 1.4E+00 1.3E+00 1.3E+00 1.3E+00 1.3E+00 1.3E+00 3-Indoxylsulfuric acid 5.3E-04 7.5E-04 4.2E-04 3.4E-04 2.7E-04 3.9E-04 Deoxyxylulose 5-phosphate N.D. N.D. N.D. 1.4E-04 N.D. 2.0E-04 2-Deoxyribose 1-phosphate N.D. 4.9E-04 5.8E-04 N.D. 2.3E-04 1.7E-04 Tridecanoic acid 3.2E-03 2.4E-03 2.5E-03 3.1E-03 2.6E-03 2.8E-03 Undecanedioic acid 7.3E-04 6.8E-04 1.1E-03 N.D. 1.1E-03 6.8E-04 O-Succinylhomoserine 1.4E-02 1.3E-02 1.3E-02 1.4E-02 1.2E-02 1.3E-02 Pantothenic acid 4.2E-01 3.8E-01 3.8E-01 3.7E-01 3.7E-01 3.7E-01 N-Acetyltyrosine N.D. 1.5E-03 1.9E-03 3.4E-04 1.5E-03 N.D. Myristoleic acid 3.8E-03 3.0E-03 3.2E-03 2.9E-03 2.8E-03 2.8E-03 Myristic acid 3.7E-02 2.5E-02 3.1E-02 3.4E-02 2.3E-02 2.7E-02 Ribose 5-phosphate 7.8E-04 2.1E-02 1.2E-02 7.7E-04 1.4E-03 6.8E-04 Ribulose 5-phosphate 1.1E-02 3.8E-02 3.7E-02 9.5E-03 1.7E-02 9.9E-03 Dodecanedioic acid 5.2E-04 N.D. 3.1E-04 N.D. 3.2E-04 1.6E-04 N-Lactoylphenylalanine 1.6E-02 1.5E-02 1.4E-02 1.1E-02 9.2E-03 9.9E-03 7-Amino-4-hydroxy-2-naphthalenesulfonic acid 2.5E-04 2.5E-04 N.D. 2.0E-04 N.D. N.D. Dimethylallylpyrophosphate 2.2E-04 N.D. 2.4E-04 N.D. N.D. N.D. -Glu-Taurine 5.6E-03 5.1E-03 5.1E-03 5.2E-03 5.3E-03 5.8E-03 myo-Inositol 1-phosphate" 4.0E-02 3.3E-02 2.7E-02 4.1E-02 2.7E-02 2.2E-02 Fructose 6-phosphate 1.6E-02 2.1E-02 2.1E-02 1.9E-02 2.2E-02 2.1E-02 myo-Inositol 2-phosphate 2.1E-02 2.0E-02 1.8E-02 2.0E-02 1.9E-02 1.9E-02 Glucose 1-phosphate 5.7E-02 5.6E-02 5.7E-02 5.4E-02 5.2E-02 5.0E-02 Glucose 6-phosphate 8.2E-02 1.0E-01 1.1E-01 1.0E-01 1.0E-01 1.0E-01 Sulfotyrosine 8.3E-03 7.2E-03 7.1E-03 6.9E-03 7.2E-03 7.2E-03 Sorbitol 6-phosphate 2.1E-02 5.9E-03 8.0E-03 1.9E-02 9.9E-03 1.8E-02 N2-Phenylacetylglutamine N.D. 3.0E-04 5.3E-04 N.D. N.D. N.D. "2,3-Diphosphoglyceric acid" 2.5E-01 2.5E-01 2.5E-01 2.0E-01 2.0E-01 2.1E-01 6-Phosphogluconic acid 3.6E-02 3.6E-02 3.6E-02 3.2E-02 3.2E-02 3.3E-02 Xanthosine 2.9E-04 3.7E-04 3.0E-04 1.9E-04 2.4E-04 1.9E-04 Orotidine 1.0E-03 8.9E-04 8.2E-04 3.9E-04 5.1E-04 4.7E-04 Sedoheptulose 7-phosphate 4.3E-02 4.1E-02 4.5E-02 2.8E-02 3.0E-02 3.1E-02 N-Acetylmuramic acid 2.2E-04 N.D. N.D. N.D. N.D. N.D. Retinoic acid 2.5E-03 7.2E-04 8.7E-04 7.8E-04 8.0E-04 7.1E-04 N-Acetylgalactosamine 4-sulfate 2.1E-04 4.9E-04 4.0E-04 2.4E-04 2.6E-04 2.0E-04 N-Acetylglucosamine 6-phosphate 8.3E-03 8.5E-03 9.3E-03 8.5E-03 9.0E-03 8.3E-03 N-Acetylglucosamine 1-phosphate 3.6E-02 3.6E-02 3.7E-02 3.3E-02 3.2E-02 3.1E-02 N-Acetylaspartylglutamic acid 1.9E-03 2.2E-03 1.5E-03 2.6E-03 2.5E-03 2.6E-03 dCMP N.D. N.D. N.D. N.D. N.D. N.D. 5-Diphosphomevalonic acid N.D. N.D. N.D. 1.8E-04 N.D. N.D. dUMP 2.3E-03 2.2E-03 2.2E-03 2.1E-03 2.2E-03 2.0E-03 N-Acetylneuraminic acid 6.1E-02 5.9E-02 6.0E-02 5.1E-02 5.0E-02 4.9E-02 "Ribulose 1,5-diphosphate" 8.7E-03 7.4E-03 7.4E-03 6.7E-03 5.7E-03 6.7E-03 Geranyl diphosphate 2.1E-04 N.D. N.D. N.D. N.D. N.D. dTMP 4.0E-04 3.5E-04 5.0E-04 N.D. 2.9E-04 3.6E-04 CMP 1.4E-02 1.3E-02 1.4E-02 1.7E-02 1.4E-02 1.7E-02 3'-CMP 2.9E-03 2.9E-03 3.0E-03 3.1E-03 2.9E-03 2.9E-03 3'-UMP 7.6E-04 4.8E-04 4.0E-04 7.3E-04 3.9E-04 4.9E-04 UMP 2.7E-01 3.9E-02 1.0E-01 3.9E-01 1.8E-01 3.8E-01 N-Glycolylneuraminic acid 1.6E-02 1.6E-02 1.6E-02 1.5E-02 1.5E-02 1.5E-02 cAMP 3.3E-03 2.8E-03 2.9E-03 2.5E-03 2.8E-03 2.7E-03 Phytic acid_divalent 6.3E-02 4.8E-02 5.5E-02 5.2E-02 4.9E-02 5.5E-02 5-Aminoimidazole-4-carboxamide ribotide 1.8E-03 1.9E-03 2.0E-03 1.1E-03 1.0E-03 1.1E-03 Ascorbate 2-glucoside 6.1E-04 N.D. 3.1E-04 5.0E-04 N.D. 4.9E-04 "Fructose 1,6-diphosphate" 8.0E-01 8.3E-01 8.6E-01 7.1E-01 7.1E-01 7.3E-01 3'-AMP 1.3E-03 1.1E-03 1.1E-03 1.1E-03 1.2E-03 9.0E-04 AMP 9.2E-02 7.5E-02 7.7E-02 9.3E-02 7.8E-02 8.8E-02 IMP 4.8E-03 4.1E-03 4.3E-03 3.5E-03 3.4E-03 2.9E-03 Maltobionic acid 3.4E-04 N.D. 4.5E-04 N.D. 4.1E-04 1.9E-04 GMP 2.8E-02 2.2E-02 2.3E-02 2.4E-02 2.1E-02 2.1E-02 XMP 3.3E-04 3.5E-04 4.2E-04 N.D. N.D. N.D. NADPH_divalent 9.7E-02 1.5E-01 1.1E-01 7.8E-02 1.0E-01 7.8E-02 Farnesyl pyrophosphate 7.5E-04 5.8E-04 8.6E-04 7.7E-04 6.0E-04 6.8E-04 CoA_divalent 5.1E-02 3.2E-02 2.2E-02 3.8E-02 3.9E-02 2.4E-02 dCDP 7.0E-04 2.3E-04 2.1E-04 7.2E-04 4.0E-04 7.7E-04 PRPP 1.5E-02 8.8E-03 1.0E-02 1.3E-02 7.2E-03 1.3E-02 FAD_divalent 1.5E-02 1.5E-02 1.6E-02 1.5E-02 1.4E-02 1.4E-02 dTDP 1.8E-03 4.7E-04 7.9E-04 1.3E-03 7.4E-04 1.3E-03 CDP 8.2E-02 2.6E-02 2.6E-02 7.8E-02 4.7E-02 7.8E-02 UDP 2.1E-01 7.9E-02 7.4E-02 2.0E-01 1.4E-01 2.1E-01 dADP 9.7E-04 5.1E-04 3.6E-04 2.3E-04 3.2E-04 5.6E-04 "P1, P4-Di(adenosine-5') tetraphosphate_divalent" 4.8E-03 3.4E-03 4.6E-03 3.9E-03 4.1E-03 4.5E-03 Thiamine diphosphate 3.0E-03 3.0E-03 3.1E-03 2.9E-03 3.1E-03 2.8E-03 Adenosine 5'-phosphosulfate 1.5E-02 2.3E-02 2.0E-02 1.5E-02 1.6E-02 1.4E-02 ADP 1.0E+00 5.2E-01 5.6E-01 8.4E-01 6.7E-01 9.9E-01 "3',5'-ADP" 1.2E-02 9.5E-03 9.0E-03 1.1E-02 8.9E-03 1.0E-02 Methylmalonyl CoA_divalent" N.D. 2.5E-04 N.D. N.D. N.D. N.D. GDP 1.8E-01 9.5E-02 1.1E-01 1.7E-01 1.2E-01 1.7E-01 HMG CoA_divalent 2.7E-03 4.1E-03 2.1E-03 9.5E-04 2.7E-03 1.5E-03 FMN 8.2E-04 8.9E-04 7.1E-04 6.6E-04 5.1E-04 5.5E-04 Adenylosuccinic acid 2.4E-04 N.D. N.D. N.D. N.D. N.D. dCTP 9.7E-03 9.9E-03 9.8E-03 5.9E-03 7.1E-03 7.0E-03 dTTP 2.2E-02 2.3E-02 2.3E-02 1.4E-02 1.6E-02 1.5E-02 CTP 7.6E-01 7.6E-01 7.5E-01 7.3E-01 7.6E-01 7.4E-01 UTP 2.2E+00 2.2E+00 2.3E+00 2.1E+00 2.2E+00 2.3E+00 CDP-choline 5.5E-03 5.2E-03 5.3E-03 5.0E-03 5.1E-03 5.0E-03 dATP 8.3E-03 8.6E-03 9.5E-03 4.6E-03 5.2E-03 5.3E-03 dGTP 4.6E-03 3.7E-03 3.2E-03 2.2E-03 2.2E-03 2.2E-03 ATP 7.5E+00 7.6E+00 8.1E+00 6.9E+00 7.0E+00 7.4E+00 GTP 1.3E+00 1.2E+00 1.2E+00 1.2E+00 1.1E+00 1.2E+00 ADP-ribose 4.5E-03 1.2E-02 1.2E-02 4.3E-03 3.6E-03 4.4E-03 dTDP-glucose 1.5E-01 1.5E-01 1.5E-01 1.7E-01 1.6E-01 1.9E-01 UDP-glucose" 1.1E+00 1.2E+00 1.1E+00 9.5E-01 1.1E+00 9.5E-01 UDP-glucuronic acid 4.6E-01 5.0E-01 4.9E-01 4.2E-01 4.6E-01 3.9E-01 ADP-glucose" 5.9E-02 5.3E-02 5.0E-02 5.2E-02 5.4E-02 5.6E-02 GDP-glucose" 2.5E-02 2.2E-02 2.1E-02 2.2E-02 2.2E-02 2.3E-02 UDP-N-acetylgalactosamine" 2.4E+00 2.2E+00 2.3E+00 2.5E+00 2.4E+00 2.7E+00 CMP-N-acetylneuraminate 1.0E-01 9.2E-02 9.2E-02 8.9E-02 7.7E-02 9.4E-02 NAD+ 7.4E-01 6.9E-01 7.1E-01 7.5E-01 6.9E-01 7.9E-01 Deamido-NAD+ N.D. 3.1E-04 4.8E-04 2.7E-04 3.9E-04 N.D. NADH 1.6E-01 1.7E-01 1.2E-01 1.3E-01 1.2E-01 1.2E-01 NADP+ 5.0E-02 2.2E-02 3.6E-02 4.5E-02 3.3E-02 4.8E-02 MS_METABOLITE_DATA_END #METABOLITES METABOLITES_START metabolite_name Glyoxylic acid Propionic acid Glycolic acid Pyruvic acid Isobutyric acid" Oxamic acid Lactic acid Phenol 2-Hydroxypyridine Valeric acid" N-Formylglycine 2-Hydroxybutyric acid 3-Hydroxybutyric acid Glyceric acid Fumaric acid Maleic acid 4-Oxovaleric acid 2-Oxoisovaleric acid 4-Methylpentanoic acid" N-Acetylglycine Succinic acid 2-Hydroxyisovaleric acid-1" 2-Hydroxyisovaleric acid-2" 5-Hydroxypentanoic acid" 2-Ethylhydracrylic acid-2 Benzoic acid Isethionic acid 5-Oxoproline Citraconic acid 4-Oxohexanoic acid" 2-Oxohexanoic acid" Heptanoic acid N-Acetyl- -alanine" Methylsuccinic acid" 2-Hydroxy-3-methylvaleric acid" 3-Hydroxyhexanoic acid" Iminodiacetic acid Malic acid Threonic acid m-Toluic acid" 4-Hydroxyphenylacetaldehyde o-Hydroxybenzoic acid p-Hydroxybenzoic acid" 6-Hydroxynicotinic acid Ethanolamine phosphate 5-Hydroxymethyluracil Octanoic acid-2 Octanoic acid-1" N-Propionylalanine-1" Isobutyrylglycine" 2-Oxoglutaric acid 2-Methylglutaric acid" 3-Ureidoisobutyric acid 2-Hydroxyglutaric acid Citramalic acid Mevalonic acid Pantoic acid Tartaric acid 2-Deoxyribonic acid-2 2-Deoxyribonic acid-1 3-Phenylpropionic acid 2-(Hydroxymethyl)benzoic acid" Cysteinesulfinic acid Phosphoglycolic acid Orotic acid Dihydroorotic acid Succinylacetone Pelargonic acid 2-Methylbutyrylglycine-1" 2-Methylbutyrylglycine-2 3-Methyladipic acid" 3-Hydroxyoctanoic acid-2" 3-Hydroxyoctanoic acid-1" Indole-3-carboxylic acid N-Acetylthreonine 3-Hydroxy-3-methylglutaric acid 2-Hydroxyadipic acid N-Acetylcysteine Phenylpyruvic acid N-Formylanthranilic acid Phthalic acid Terephthalic acid Arabinonic acid p-Methoxyphenylacetic acid" N-Acetyltaurine Phosphoenolpyruvic acid Uric acid Cysteic acid Glyceraldehyde 3-phosphate Dihydroxyacetone phosphate Glycerol 2-phosphate Glycerol 3-phosphate Decanoic acid N-Hexanoylglycine" Phenol sulphate p-Phenolsulfonic acid cis-Aconitic acid N-Acetylasparagine Suberic acid N-Acetylaspartic acid Glucurone "1,2,3-Propanetricarboxylic acid" N-Carbamoylaspartic acid N-Formylmethionine Hippuric acid Caffeic acid" Hydroxyphenyllactic acid" Homocysteic acid 3-Methoxy-4-hydroxyphenylethyleneglycol O-Phosphoserine 2-Phosphoglyceric acid 3-Phosphoglyceric acid Undecanoic acid p-Cresol sulfate N-Acetylglutamine Azelaic acid 3-Hydroxydecanoic acid" Indole-3-glyoxylic acid N-Acetylglutamic acid "2,4-Dichlorobenzoic acid" N-Acetylmethionine Citric acid Isocitric acid Quinic acid Phenaceturic acid" Glucuronic acid" Gluconic acid Lauric acid Capryloylglycine p-Sulfobenzoic acid Sebacic acid 5-Methoxyindoleacetic acid" Phenylpropionylglycine" p-Hydroxyphenylacetylglycine Glucaric acid Mucic acid Phosphocreatine 3-Indoxylsulfuric acid Deoxyxylulose 5-phosphate 2-Deoxyribose 1-phosphate Tridecanoic acid Undecanedioic acid O-Succinylhomoserine Pantothenic acid N-Acetyltyrosine Myristoleic acid Myristic acid Ribose 5-phosphate Ribulose 5-phosphate Dodecanedioic acid N-Lactoylphenylalanine 7-Amino-4-hydroxy-2-naphthalenesulfonic acid Dimethylallylpyrophosphate -Glu-Taurine myo-Inositol 1-phosphate" Fructose 6-phosphate myo-Inositol 2-phosphate Glucose 1-phosphate Glucose 6-phosphate Sulfotyrosine Sorbitol 6-phosphate N2-Phenylacetylglutamine "2,3-Diphosphoglyceric acid" 6-Phosphogluconic acid Xanthosine Orotidine Sedoheptulose 7-phosphate N-Acetylmuramic acid Retinoic acid N-Acetylgalactosamine 4-sulfate N-Acetylglucosamine 6-phosphate N-Acetylglucosamine 1-phosphate N-Acetylaspartylglutamic acid dCMP 5-Diphosphomevalonic acid dUMP N-Acetylneuraminic acid "Ribulose 1,5-diphosphate" Geranyl diphosphate dTMP CMP 3'-CMP 3'-UMP UMP N-Glycolylneuraminic acid cAMP Phytic acid_divalent 5-Aminoimidazole-4-carboxamide ribotide Ascorbate 2-glucoside "Fructose 1,6-diphosphate" 3'-AMP AMP IMP Maltobionic acid GMP XMP NADPH_divalent Farnesyl pyrophosphate CoA_divalent dCDP PRPP FAD_divalent dTDP CDP UDP dADP "P1, P4-Di(adenosine-5') tetraphosphate_divalent" Thiamine diphosphate Adenosine 5'-phosphosulfate ADP "3',5'-ADP" Methylmalonyl CoA_divalent" GDP HMG CoA_divalent FMN Adenylosuccinic acid dCTP dTTP CTP UTP CDP-choline dATP dGTP ATP GTP ADP-ribose dTDP-glucose UDP-glucose" UDP-glucuronic acid ADP-glucose" GDP-glucose" UDP-N-acetylgalactosamine" CMP-N-acetylneuraminate NAD+ Deamido-NAD+ NADH NADP+ METABOLITES_END #END