#METABOLOMICS WORKBENCH jrdiefe1_20250729_105203 DATATRACK_ID:6229 STUDY_ID:ST004091 ANALYSIS_ID:AN006793 PROJECT_ID:PR002570 VERSION 1 CREATED_ON August 7, 2025, 12:48 pm #PROJECT PR:PROJECT_TITLE The Chromobacterium Volatilome is Strongly Influenced by Growth on Liquid versus PR:PROJECT_TITLE Solid Media PR:PROJECT_TYPE Untargeted metabolomics PR:PROJECT_SUMMARY The study of microbial volatile organic compounds (mVOCs) is a growing area of PR:PROJECT_SUMMARY research, with applications ranging from agriculture to human health. The PR:PROJECT_SUMMARY majority of the mVOC data are from in vitro liquid cultures, while few analyses PR:PROJECT_SUMMARY of bacterial and fungal volatilomes on solid media cultures exist. Studies PR:PROJECT_SUMMARY comparing liquid versus solid cultures of bacteria and fungi show significant PR:PROJECT_SUMMARY changes to the soluble metabolites that are produced, suggesting that large PR:PROJECT_SUMMARY differences would be observed for mVOCs based on the culture conditions. In this PR:PROJECT_SUMMARY study, we conducted an untargeted analysis of the volatile profiles of two PR:PROJECT_SUMMARY species of Chromobacterium, C. violaceum (strain ATCC12472) and C. vaccinii PR:PROJECT_SUMMARY (strain MWU328), and those of their isogenic cviR− quorum-sensing mutants PR:PROJECT_SUMMARY cultured on solid and liquid King’s Medium B media. PR:INSTITUTE Arizona State University PR:DEPARTMENT School of Life Sciences PR:LABORATORY Bean Laboratory PR:LAST_NAME Bean PR:FIRST_NAME Heather PR:ADDRESS PO Box 874501, Tempe AZ, 85287, USA PR:EMAIL Heather.D.Bean@asu.edu PR:PHONE 480-727-3395 #STUDY ST:STUDY_TITLE The Chromobacterium Volatilome is Strongly Influenced by Growth on Liquid versus ST:STUDY_TITLE Solid Media ST:STUDY_TYPE Untargeted metabolomics ST:STUDY_SUMMARY The study of microbial volatile organic compounds (mVOCs) is a growing area of ST:STUDY_SUMMARY research, with applications ranging from agriculture to human health. The ST:STUDY_SUMMARY majority of the mVOC data are from in vitro liquid cultures, while few analyses ST:STUDY_SUMMARY of bacterial and fungal volatilomes on solid media cultures exist. Studies ST:STUDY_SUMMARY comparing liquid versus solid cultures of bacteria and fungi show significant ST:STUDY_SUMMARY changes to the soluble metabolites that are produced, suggesting that large ST:STUDY_SUMMARY differences would be observed for mVOCs based on the culture conditions. To test ST:STUDY_SUMMARY this idea, we characterized the volatilomes of two species of Chromobacterium, ST:STUDY_SUMMARY C. violaceum (strain ATCC12472) and C. vaccinii (strain MWU328), and those of ST:STUDY_SUMMARY their isogenic cviR− quorum-sensing mutants cultured on solid versus liquid ST:STUDY_SUMMARY King’s Medium B media. VOCs were sampled using thin-film solid-phase ST:STUDY_SUMMARY microextraction (TF-SPME) and analyzed by two-dimensional gas ST:STUDY_SUMMARY chromatography–time-of-flight mass spectrometry (GC×GC-TOFMS). Of the three ST:STUDY_SUMMARY variables examined – Chromobacterium species, media type, and quorum sensing ST:STUDY_SUMMARY ability – growth on liquid versus solid media caused the most significant ST:STUDY_SUMMARY differences in the volatilomes. Bacterial species and strain were also ST:STUDY_SUMMARY influential, but to a lesser degree. Our findings indicate the importance of ST:STUDY_SUMMARY growth conditions in microbial volatilomics, and therefore, more consideration ST:STUDY_SUMMARY should be given to how microorganisms are cultured for volatilome analyses and ST:STUDY_SUMMARY how those conditions are reported. ST:INSTITUTE Arizona State University ST:LAST_NAME Bean ST:FIRST_NAME Heather ST:ADDRESS PO Box 874501, Tempe, AZ, 85287, USA ST:EMAIL Heather.D.Bean@asu.edu ST:PHONE 480-727-3395 #SUBJECT SU:SUBJECT_TYPE Bacteria SU:SUBJECT_SPECIES Chromobacterium violaceum; Chromobacterium vaccinii SU:TAXONOMY_ID 536;1108595 SU:CELL_BIOSOURCE_OR_SUPPLIER ATCC; Midwestern University #SUBJECT_SAMPLE_FACTORS: SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Raw file names and additional sample data SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_liquid_2B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_liquid_2B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_solid_6A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_solid_6A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_liquid_3A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_liquid_3A_1.smp SUBJECT_SAMPLE_FACTORS Media KMB_liquid_1B_1 Sample source:Blank | Strain:NA | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=KMB_liquid_1B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_solid_4B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_solid_4B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_liquid_1B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_liquid_1B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_solid_4B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_solid_4B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_liquid_2C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_liquid_2C_1.smp SUBJECT_SAMPLE_FACTORS Media KMB_liquid_2A_1 Sample source:Blank | Strain:NA | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=KMB_liquid_2A_1.smp SUBJECT_SAMPLE_FACTORS Alkane Standard KI Mix_2 Sample source:NA | Strain:NA | Culture medium:NA Culture temperature=NA; RAW_FILE_NAME(Raw file name)=KI Mix_2.smp SUBJECT_SAMPLE_FACTORS Empty run Blank_5 Sample source:NA | Strain:NA | Culture medium:NA Culture temperature=NA; RAW_FILE_NAME(Raw file name)=Blank_5.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_solid_2B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_solid_2B_1.smp SUBJECT_SAMPLE_FACTORS Media KMB_liquid_1C_1 Sample source:Bacteria | Strain:NA | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=KMB_liquid_1C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_liquid_4B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_liquid_4B_1.smp SUBJECT_SAMPLE_FACTORS Media KMB_solid_2C_1 Sample source:Blank | Strain:NA | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=KMB_solid_2C_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_liquid_2A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_liquid_2A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_liquid_5C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_liquid_5C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_liquid_4C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_liquid_4C_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_liquid_4A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_liquid_4A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_liquid_2C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_liquid_2C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_liquid_4A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_liquid_4A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_liquid_5A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_liquid_5A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_liquid_6B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_liquid_6B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_liquid_4C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_liquid_4C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_liquid_1A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_liquid_1A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_solid_5B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_solid_5B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_liquid_3A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_liquid_3A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_solid_5B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_solid_5B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_solid_1C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_solid_1C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_liquid_2A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_liquid_2A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_liquid_2B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_liquid_2B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_liquid_5A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_liquid_5A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_liquid_6B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_liquid_6B_1.smp SUBJECT_SAMPLE_FACTORS Media KMB_liquid_3A_1 Sample source:Blank | Strain:NA | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=KMB_liquid_3A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_liquid_1A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_liquid_1A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_liquid_3B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_liquid_3B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_liquid_2B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_liquid_2B_1.smp SUBJECT_SAMPLE_FACTORS Media KMB_liquid_2C_1 Sample source:Blank | Strain:NA | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=KMB_liquid_2C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_solid_1C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_solid_1C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_solid_2C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_solid_2C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_solid_6B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_solid_6B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_solid_6B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_solid_6B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_liquid_6B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_liquid_6B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_solid_2C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_solid_2C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_solid_6C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_solid_6C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_solid_5C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_solid_5C_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_solid_1B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_solid_1B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_solid_6B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_solid_6B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_liquid_1B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_liquid_1B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_liquid_1B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_liquid_1B_1.smp SUBJECT_SAMPLE_FACTORS Alkane Standard KI Mix_3 Sample source:NA | Strain:NA | Culture medium:NA Culture temperature=NA; RAW_FILE_NAME(Raw file name)=KI Mix_3.smp SUBJECT_SAMPLE_FACTORS Empty run Blank_12 Sample source:NA | Strain:NA | Culture medium:NA Culture temperature=NA; RAW_FILE_NAME(Raw file name)=Blank_12.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_solid_3C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_solid_3C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_liquid_2A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_liquid_2A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_liquid_4B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_liquid_4B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_solid_4B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_solid_4B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_solid_3B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_solid_3B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_solid_3B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_solid_3B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_liquid_5C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_liquid_5C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_solid_1B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_solid_1B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_solid_1A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_solid_1A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_solid_2A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_solid_2A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_solid_4C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_solid_4C_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_solid_2B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_solid_2B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_liquid_4C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_liquid_4C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_solid_6B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_solid_6B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_liquid_2C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_liquid_2C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_liquid_5A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_liquid_5A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_solid_4B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_solid_4B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_solid_2A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_solid_2A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_solid_1B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_solid_1B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_liquid_5B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_liquid_5B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_solid_5A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_solid_5A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_liquid_3A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_liquid_3A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_solid_2A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_solid_2A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_liquid_6C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_liquid_6C_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_solid_4A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_solid_4A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_solid_2C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_solid_2C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_liquid_4B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_liquid_4B_1.smp SUBJECT_SAMPLE_FACTORS Media KMB_solid_3B_1 Sample source:Blank | Strain:NA | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=KMB_solid_3B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_liquid_1A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_liquid_1A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_solid_5A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_solid_5A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_liquid_2A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_liquid_2A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_solid_4C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_solid_4C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_solid_4A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_solid_4A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_solid_5A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_solid_5A_1.smp SUBJECT_SAMPLE_FACTORS Media KMB_solid_2B_1 Sample source:Blank | Strain:NA | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=KMB_solid_2B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_solid_4A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_solid_4A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_liquid_5B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_liquid_5B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_solid_1A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_solid_1A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_solid_2C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_solid_2C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_solid_1A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_solid_1A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_liquid_1C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_liquid_1C_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_liquid_5A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_liquid_5A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_solid_2B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_solid_2B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_liquid_6A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_liquid_6A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_solid_1C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_solid_1C_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_solid_2A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_solid_2A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_solid_3C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_solid_3C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_liquid_6A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_liquid_6A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_liquid_2C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_liquid_2C_1.smp SUBJECT_SAMPLE_FACTORS Media KMB_solid_3C_1 Sample source:Blank | Strain:NA | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=KMB_solid_3C_1.smp SUBJECT_SAMPLE_FACTORS Media KMB_liquid_1A_1 Sample source:Blank | Strain:NA | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=KMB_liquid_1A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_liquid_4C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_liquid_4C_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_solid_5B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_solid_5B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_solid_5A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_solid_5A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_solid_3B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_solid_3B_1.smp SUBJECT_SAMPLE_FACTORS Media KMB_solid_1A_1 Sample source:Blank | Strain:NA | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=KMB_solid_1A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_liquid_6A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_liquid_6A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_solid_5C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_solid_5C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_solid_3A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_solid_3A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_liquid_4A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_liquid_4A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_solid_3A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_solid_3A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_liquid_1B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_liquid_1B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_solid_6C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_solid_6C_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_solid_2B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_solid_2B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_solid_6C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_solid_6C_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_solid_1A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_solid_1A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_solid_4C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_solid_4C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_liquid_3B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_liquid_3B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_liquid_1A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_liquid_1A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_liquid_2B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_liquid_2B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_liquid_4A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_liquid_4A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_solid_5C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_solid_5C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_solid_4A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_solid_4A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_solid_6C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_solid_6C_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_liquid_5B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_liquid_5B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_solid_6A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_solid_6A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_solid_1B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_solid_1B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_solid_6A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_solid_6A_1.smp SUBJECT_SAMPLE_FACTORS Media KMB_solid_1C_1 Sample source:Blank | Strain:NA | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=KMB_solid_1C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_liquid_5B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_liquid_5B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_solid_1C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_solid_1C_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_solid_3C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_solid_3C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_liquid_6B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_liquid_6B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_liquid_1C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_liquid_1C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_solid_3C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_solid_3C_1.smp SUBJECT_SAMPLE_FACTORS Media KMB_liquid_3C_1 Sample source:Blank | Strain:NA | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=KMB_liquid_3C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_liquid_6C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_liquid_6C_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_solid_3A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_solid_3A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_liquid_3B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_liquid_3B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_solid_4C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_solid_4C_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_liquid_3A_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_liquid_3A_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_liquid_4B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_liquid_4B_1.smp SUBJECT_SAMPLE_FACTORS Media KMB_liquid_3B_1 Sample source:Blank | Strain:NA | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=KMB_liquid_3B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_liquid_6C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_liquid_6C_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_liquid_3B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_liquid_3B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_liquid_3C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_liquid_3C_1.smp SUBJECT_SAMPLE_FACTORS Alkane Standard KI Mix_4 Sample source:NA | Strain:NA | Culture medium:NA Culture temperature=NA; RAW_FILE_NAME(Raw file name)=KI Mix_4.smp SUBJECT_SAMPLE_FACTORS Empty run Blank_13 Sample source:NA | Strain:NA | Culture medium:NA Culture temperature=NA; RAW_FILE_NAME(Raw file name)=Blank_13.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_liquid_3C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_liquid_3C_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_liquid_5C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_liquid_5C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_solid_6A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_solid_6A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_liquid_1C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_liquid_1C_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_liquid_6C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_liquid_6C_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_liquid_5C_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_liquid_5C_1.smp SUBJECT_SAMPLE_FACTORS Media KMB_solid_1B_1 Sample source:Blank | Strain:NA | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=KMB_solid_1B_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472w_solid_3A_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472w_solid_3A_1.smp SUBJECT_SAMPLE_FACTORS C. violaceum CV12472_solid_5B_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV12472_solid_5B_1.smp SUBJECT_SAMPLE_FACTORS Media KMB_liquid_2B_1 Sample source:Blank | Strain:NA | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=KMB_liquid_2B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_solid_5C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_solid_5C_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328w_solid_3B_1 Sample source:Bacteria | Strain:cviR- | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328w_solid_3B_1.smp SUBJECT_SAMPLE_FACTORS C. vaccinii CV328_liquid_3C_1 Sample source:Bacteria | Strain:QS+ | Culture medium:KMB_broth Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=CV328_liquid_3C_1.smp SUBJECT_SAMPLE_FACTORS Media KMB_solid_3A_1 Sample source:Blank | Strain:NA | Culture medium:KMB_agar Culture temperature=25°C; RAW_FILE_NAME(Raw file name)=KMB_solid_3A_1.smp #COLLECTION CO:COLLECTION_SUMMARY Quorum sensing sufficient (QS+) Chromobacterium violaceum (ATCC 12472), CO:COLLECTION_SUMMARY Chromobacterium vaccinii (MWU 328), and their respective isogenic quorum sensing CO:COLLECTION_SUMMARY mutants (cviR-), 12472w and 328w, were cultured in King’s Medium B (KMB). Six CO:COLLECTION_SUMMARY biological replicates of each strain were prepared for each media type (i.e., CO:COLLECTION_SUMMARY broth or agar). Uninoculated medium controls were prepared in triplicates for CO:COLLECTION_SUMMARY KMB broth and KMB agar, respectively. CO:SAMPLE_TYPE Bacterial cells #TREATMENT TR:TREATMENT_SUMMARY Four different strains of Chromobacterium (ATCC 12472, 12472w, MWU 328, 328w) TR:TREATMENT_SUMMARY were inoculated in King’s Medium B (KMB) broth and incubated overnight at TR:TREATMENT_SUMMARY 25ºC. Sub-cultures of each strain were transferred into replicates of KMB broth TR:TREATMENT_SUMMARY (liquid) and KMB agar (solid). Culture replicates were incubated at 25ºC for 7 TR:TREATMENT_SUMMARY h and 15.5 h for broth and agar, respectively. #SAMPLEPREP SP:SAMPLEPREP_SUMMARY The volatile metabolites were captured using headspace thin-film solid-phase SP:SAMPLEPREP_SUMMARY microextraction (HS-TF-SPME). For volatile collection, thin-films composed of SP:SAMPLEPREP_SUMMARY divinylbenzene and polydimethylsiloxane (DVB/PDMS) on a carbon mesh were placed SP:SAMPLEPREP_SUMMARY in technical triplicates in each biological culture or media-only control. For SP:SAMPLEPREP_SUMMARY broth cultures, thin-films were suspended in the flask headspace. For agar SP:SAMPLEPREP_SUMMARY cultures, thin-films were placed on the inverted lid of the petri dish. Cultures SP:SAMPLEPREP_SUMMARY were incubated at 25ºC for an additional 1 h for volatile collection. After VOC SP:SAMPLEPREP_SUMMARY collection, thin-films were removed from cultures and place in thermal SP:SAMPLEPREP_SUMMARY desorption tubes and stored at 4ºC prior to analysis. Volatile metabolite SP:SAMPLEPREP_SUMMARY analysis was performed using a Gerstel® MPS Robotic Pro MultiPurpose SP:SAMPLEPREP_SUMMARY autosampler directed by Maestro® software (Gerstel®, Inc., Linthicum, MD) and SP:SAMPLEPREP_SUMMARY two-dimensional gas chromatography−time-of-flight mass spectrometry SP:SAMPLEPREP_SUMMARY (GC×GC–TOFMS) using a LECO® Pegasus® 4D and Agilent® 7890B GC (LECO® SP:SAMPLEPREP_SUMMARY Corp., St. Joseph, MI). SP:EXTRACTION_METHOD Headspace thin-film microextraction (HS-TFME) #CHROMATOGRAPHY CH:CHROMATOGRAPHY_SUMMARY Column 1: Rxi-624Sil MS,(60m × 0.25mm × 1.4um); Column 2: Stabilwax,(1m × CH:CHROMATOGRAPHY_SUMMARY 0.25mm × 0.5um) CH:CHROMATOGRAPHY_TYPE GC CH:INSTRUMENT_NAME Agilent 7890B CH:COLUMN_NAME Rxi-624Sil MS (60m × 0.25mm, 1.4um) and Stabilwax (1m × 0.25mm, 0.5um) CH:SOLVENT_A NA CH:SOLVENT_B NA CH:FLOW_GRADIENT NA CH:FLOW_RATE 2 mL∙min-1 (constant) CH:COLUMN_TEMPERATURE NA CH:METHODS_FILENAME ST_GCxGC_methods.pdf #ANALYSIS AN:ANALYSIS_TYPE MS AN:ANALYSIS_PROTOCOL_FILE ST_MS_methods.pdf #MS MS:INSTRUMENT_NAME Leco Pegasus 4D GCxGC TOF MS:INSTRUMENT_TYPE TOF MS:MS_TYPE EI MS:ION_MODE POSITIVE MS:MS_COMMENTS See attached file. RT1 and RT2 refer to the peak retention times for column 1 MS:MS_COMMENTS and 2, respectively. Column 1: Rxi-624Sil MS,(60m × 0.25mm × 1.4um); 2: MS:MS_COMMENTS Stabilwax,(1m × 0.25mm × 0.5um) MS:MS_RESULTS_FILE ST004091_AN006793_Results.txt UNITS:Peak areas Has m/z:No Has RT:Yes RT units:Seconds #END