#METABOLOMICS WORKBENCH ffouladi_20250228_085650 DATATRACK_ID:5687 STUDY_ID:ST004210 ANALYSIS_ID:AN007002 PROJECT_ID:PR002653 VERSION 1 CREATED_ON September 22, 2025, 7:17 pm #PROJECT PR:PROJECT_TITLE A taxon-specific measurement of disruption in a multi-modal study of microbiomes PR:PROJECT_TITLE and metabolomes reveals system-wide dysbiosis preceding HIV-1 infection PR:PROJECT_SUMMARY The microbiome is important in immune responses and inflammation in HIV-1 PR:PROJECT_SUMMARY infection. Hence, a deeper understanding of the microbiome prior to HIV-1 PR:PROJECT_SUMMARY infection is potentially important for HIV-1 prevention strategies. Using stool, PR:PROJECT_SUMMARY oral washes, and plasma biospecimens obtained from HIV-1 negative men who have PR:PROJECT_SUMMARY sex with men (MSM), we found several differences in microbial ecologies, gene PR:PROJECT_SUMMARY functions, and metabolites between MSM who became HIV-1 infected approximately 6 PR:PROJECT_SUMMARY months later and those who remained HIV-1 uninfected. The HIV-1 infected MSM had PR:PROJECT_SUMMARY an enrichment of enzymes involved in purine metabolism, lower amino acid PR:PROJECT_SUMMARY metabolism, and higher oxidative stress before the infection. Using a novel PR:PROJECT_SUMMARY taxon-specific measure of DISruption in COrrelations (DISCO) with various data PR:PROJECT_SUMMARY modalities, we identified several gut and oral species with disrupted PR:PROJECT_SUMMARY correlations prior to HIV-1 infection. Application of DISCO to external datasets PR:PROJECT_SUMMARY revealed that Prevotella spp. are consistently disrupted in their correlations PR:PROJECT_SUMMARY across multiple cohorts prior to or following HIV-1 infection. PR:INSTITUTE National Institute of Environmental Health Sciences PR:LAST_NAME Fouladi PR:FIRST_NAME Farnaz PR:ADDRESS 111 T.W. Alexander Drive, Durham, NC 27709 PR:EMAIL farnaz.fouladi@nih.gov PR:PHONE 984-287-4663 #STUDY ST:STUDY_TITLE Stool Metabolomics Profiling in Men Who Have Sex with Men Before HIV-1 Infection ST:STUDY_SUMMARY This study includes Men who have Sex with Men (MSM) enrolled in the Multicenter ST:STUDY_SUMMARY AIDS Cohort study (MACS) between 1984-1985. All participants were HIV-1-negative ST:STUDY_SUMMARY during their first MACS clinic visit, when samples were collected. Metabolic ST:STUDY_SUMMARY profiles are compared between those who were infected with HIV-1 by their second ST:STUDY_SUMMARY study clinic visit approximately 6 months later (termed Pre-HIV) and those who ST:STUDY_SUMMARY remained HIV-negative (termed Non-HIV) at their second MACS clinic visit. Data ST:STUDY_SUMMARY Availability : Access to individual-level data from the MACS/WIHS Combined ST:STUDY_SUMMARY Cohort Study Data (MWCCS) may be obtained upon review and approval of a MWCCS ST:STUDY_SUMMARY concept sheet. Links and instructions for online concept sheet submission are on ST:STUDY_SUMMARY the study website (http://mwccs.org/). Once the concept sheet is approved, ST:STUDY_SUMMARY please contact Dr. Yue Chen (cheny@pitt.edu) to obtain the metadata. ST:INSTITUTE National Institute of Environmental Health Sciences ST:LAST_NAME Fouladi ST:FIRST_NAME Farnaz ST:ADDRESS 111 T.W. Alexander Drive, Durham, NC 27709 ST:EMAIL farnaz.fouladi@nih.gov ST:PHONE 984-287-4663 #SUBJECT SU:SUBJECT_TYPE Human SU:SUBJECT_SPECIES Homo sapiens SU:TAXONOMY_ID 9606 #SUBJECT_SAMPLE_FACTORS: SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Raw file names and additional sample data SUBJECT_SAMPLE_FACTORS DUMMY82 308 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S308.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN308.raw SUBJECT_SAMPLE_FACTORS DUMMY83 291 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S291.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN291.raw SUBJECT_SAMPLE_FACTORS DUMMY84 286 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S286.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN286.raw SUBJECT_SAMPLE_FACTORS DUMMY85 293 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S293.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN293.raw SUBJECT_SAMPLE_FACTORS DUMMY86 307 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S307.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN307.raw SUBJECT_SAMPLE_FACTORS DUMMY87 301 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S301.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN301.raw SUBJECT_SAMPLE_FACTORS DUMMY113 8 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S8.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN8.raw SUBJECT_SAMPLE_FACTORS DUMMY88 305 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S305.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN305.raw SUBJECT_SAMPLE_FACTORS DUMMY89 321 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S321.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN321.raw SUBJECT_SAMPLE_FACTORS DUMMY114 7 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S7.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN7.raw SUBJECT_SAMPLE_FACTORS DUMMY90 317 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S317.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN317.raw SUBJECT_SAMPLE_FACTORS DUMMY91 312 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S312.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN312.raw SUBJECT_SAMPLE_FACTORS DUMMY92 290 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S290.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN290.raw SUBJECT_SAMPLE_FACTORS DUMMY93 295 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S295.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN295.raw SUBJECT_SAMPLE_FACTORS DUMMY94 316 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S316.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN316.raw SUBJECT_SAMPLE_FACTORS DUMMY95 315 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S315.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN315.raw SUBJECT_SAMPLE_FACTORS DUMMY96 302 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S302.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN302.raw SUBJECT_SAMPLE_FACTORS DUMMY97 300 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S300.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN300.raw SUBJECT_SAMPLE_FACTORS DUMMY99 297 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S297.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN297.raw SUBJECT_SAMPLE_FACTORS DUMMY100 304 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S304.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN304.raw SUBJECT_SAMPLE_FACTORS DUMMY101 310 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S310.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN310.raw SUBJECT_SAMPLE_FACTORS DUMMY102 299 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S299.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN299.raw SUBJECT_SAMPLE_FACTORS DUMMY115 6 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S6.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN6.raw SUBJECT_SAMPLE_FACTORS DUMMY103 298 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S298.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN298.raw SUBJECT_SAMPLE_FACTORS DUMMY104 306 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S306.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN306.raw SUBJECT_SAMPLE_FACTORS DUMMY105 309 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S309.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN309.raw SUBJECT_SAMPLE_FACTORS DUMMY106 294 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S294.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN294.raw SUBJECT_SAMPLE_FACTORS DUMMY107 311 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S311.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN311.raw SUBJECT_SAMPLE_FACTORS DUMMY108 296 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S296.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN296.raw SUBJECT_SAMPLE_FACTORS DUMMY117 2 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S2.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN2.raw SUBJECT_SAMPLE_FACTORS DUMMY110 292 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S292.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN292.raw SUBJECT_SAMPLE_FACTORS DUMMY111 287 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S287.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN287.raw SUBJECT_SAMPLE_FACTORS DUMMY118 3 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S3.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN3.raw SUBJECT_SAMPLE_FACTORS DUMMY119 4 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S4.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN4.raw SUBJECT_SAMPLE_FACTORS DUMMY121 9 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S9.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN9.raw SUBJECT_SAMPLE_FACTORS DUMMY122 10 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S10.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN10.raw SUBJECT_SAMPLE_FACTORS DUMMY123 11 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S11.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN11.raw SUBJECT_SAMPLE_FACTORS DUMMY126 15 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S15.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN15.raw SUBJECT_SAMPLE_FACTORS DUMMY131 19 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S19.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN19.raw SUBJECT_SAMPLE_FACTORS DUMMY134 23 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S23.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN23.raw SUBJECT_SAMPLE_FACTORS DUMMY135 22 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S22.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN22.raw SUBJECT_SAMPLE_FACTORS DUMMY137 25 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S25.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN25.raw SUBJECT_SAMPLE_FACTORS DUMMY138 26 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S26.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN26.raw SUBJECT_SAMPLE_FACTORS DUMMY139 27 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S27.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN27.raw SUBJECT_SAMPLE_FACTORS DUMMY142 30 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S30.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN30.raw SUBJECT_SAMPLE_FACTORS DUMMY143 29 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S29.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN29.raw SUBJECT_SAMPLE_FACTORS DUMMY149 37 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S37.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN37.raw SUBJECT_SAMPLE_FACTORS DUMMY39 204 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S204.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN204.raw SUBJECT_SAMPLE_FACTORS DUMMY151 42 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S42.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN42.raw SUBJECT_SAMPLE_FACTORS DUMMY35 201 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S201.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN201.raw SUBJECT_SAMPLE_FACTORS DUMMY152 44 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S44.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN44.raw SUBJECT_SAMPLE_FACTORS DUMMY36 200 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S200.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN200.raw SUBJECT_SAMPLE_FACTORS DUMMY155 46 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S46.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN46.raw SUBJECT_SAMPLE_FACTORS DUMMY156 45 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S45.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN45.raw SUBJECT_SAMPLE_FACTORS DUMMY55 254 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S254.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN254.raw SUBJECT_SAMPLE_FACTORS DUMMY56 258 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S258.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN258.raw SUBJECT_SAMPLE_FACTORS DUMMY44 220 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S220.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN220.raw SUBJECT_SAMPLE_FACTORS DUMMY57 259 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S259.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN259.raw SUBJECT_SAMPLE_FACTORS DUMMY159 52 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S52.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN52.raw SUBJECT_SAMPLE_FACTORS DUMMY160 56 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S56.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN56.raw SUBJECT_SAMPLE_FACTORS DUMMY162 54 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S54.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN54.raw SUBJECT_SAMPLE_FACTORS DUMMY58 261 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S261.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN261.raw SUBJECT_SAMPLE_FACTORS DUMMY59 265 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S265.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN265.raw SUBJECT_SAMPLE_FACTORS DUMMY31 194 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S194.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN194.raw SUBJECT_SAMPLE_FACTORS DUMMY165 58 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S58.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN58.raw SUBJECT_SAMPLE_FACTORS DUMMY166 59 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S59.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN59.raw SUBJECT_SAMPLE_FACTORS DUMMY34 197 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S197.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN197.raw SUBJECT_SAMPLE_FACTORS DUMMY1 162 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S162.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN162.raw SUBJECT_SAMPLE_FACTORS DUMMY171 66 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S66.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN66.raw SUBJECT_SAMPLE_FACTORS DUMMY2 163 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S163.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN163.raw SUBJECT_SAMPLE_FACTORS DUMMY3 164 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S164.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN164.raw SUBJECT_SAMPLE_FACTORS DUMMY4 165 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S165.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN165.raw SUBJECT_SAMPLE_FACTORS DUMMY6 168 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S168.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN168.raw SUBJECT_SAMPLE_FACTORS DUMMY5 169 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S169.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN169.raw SUBJECT_SAMPLE_FACTORS DUMMY172 67 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S67.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN67.raw SUBJECT_SAMPLE_FACTORS DUMMY174 72 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S72.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN72.raw SUBJECT_SAMPLE_FACTORS DUMMY175 71 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S71.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN71.raw SUBJECT_SAMPLE_FACTORS DUMMY178 73 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S73.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN73.raw SUBJECT_SAMPLE_FACTORS DUMMY180 75 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S75.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN75.raw SUBJECT_SAMPLE_FACTORS DUMMY182 80 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S80.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN80.raw SUBJECT_SAMPLE_FACTORS DUMMY183 79 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S79.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN79.raw SUBJECT_SAMPLE_FACTORS DUMMY185 77 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S77.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN77.raw SUBJECT_SAMPLE_FACTORS DUMMY37 199 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S199.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN199.raw SUBJECT_SAMPLE_FACTORS DUMMY187 82 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S82.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN82.raw SUBJECT_SAMPLE_FACTORS DUMMY21 183 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S183.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN183.raw SUBJECT_SAMPLE_FACTORS DUMMY22 182 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S182.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN182.raw SUBJECT_SAMPLE_FACTORS DUMMY40 205 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S205.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN205.raw SUBJECT_SAMPLE_FACTORS DUMMY41 209 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S209.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN209.raw SUBJECT_SAMPLE_FACTORS DUMMY188 83 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S83.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN83.raw SUBJECT_SAMPLE_FACTORS DUMMY190 88 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S88.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN88.raw SUBJECT_SAMPLE_FACTORS DUMMY23 186 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S186.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN186.raw SUBJECT_SAMPLE_FACTORS DUMMY192 86 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S86.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN86.raw SUBJECT_SAMPLE_FACTORS DUMMY193 85 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S85.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN85.raw SUBJECT_SAMPLE_FACTORS DUMMY25 188 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S188.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN188.raw SUBJECT_SAMPLE_FACTORS DUMMY60 264 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S264.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN264.raw SUBJECT_SAMPLE_FACTORS DUMMY195 90 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S90.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN90.raw SUBJECT_SAMPLE_FACTORS DUMMY30 190 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S190.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN190.raw SUBJECT_SAMPLE_FACTORS DUMMY198 96 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S96.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN96.raw SUBJECT_SAMPLE_FACTORS DUMMY24 187 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S187.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN187.raw SUBJECT_SAMPLE_FACTORS DUMMY200 94 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S94.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN94.raw SUBJECT_SAMPLE_FACTORS DUMMY46 263 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S263.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN263.raw SUBJECT_SAMPLE_FACTORS DUMMY203 98 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S98.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN98.raw SUBJECT_SAMPLE_FACTORS DUMMY204 99 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S99.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN99.raw SUBJECT_SAMPLE_FACTORS DUMMY206 104 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S104.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN104.raw SUBJECT_SAMPLE_FACTORS DUMMY28 192 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S192.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN192.raw SUBJECT_SAMPLE_FACTORS DUMMY207 103 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S103.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN103.raw SUBJECT_SAMPLE_FACTORS DUMMY208 102 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S102.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN102.raw SUBJECT_SAMPLE_FACTORS DUMMY212 107 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S107.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN107.raw SUBJECT_SAMPLE_FACTORS DUMMY214 112 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S112.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN112.raw SUBJECT_SAMPLE_FACTORS DUMMY217 109 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S109.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN109.raw SUBJECT_SAMPLE_FACTORS DUMMY16 174 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S174.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN174.raw SUBJECT_SAMPLE_FACTORS DUMMY53 252 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S252.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN252.raw SUBJECT_SAMPLE_FACTORS DUMMY218 113 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S113.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN113.raw SUBJECT_SAMPLE_FACTORS DUMMY15 175 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S175.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN175.raw SUBJECT_SAMPLE_FACTORS DUMMY14 176 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S176.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN176.raw SUBJECT_SAMPLE_FACTORS DUMMY219 114 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S114.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN114.raw SUBJECT_SAMPLE_FACTORS DUMMY7 167 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S167.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN167.raw SUBJECT_SAMPLE_FACTORS DUMMY220 115 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S115.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN115.raw SUBJECT_SAMPLE_FACTORS DUMMY10 171 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S171.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN171.raw SUBJECT_SAMPLE_FACTORS DUMMY222 120 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S120.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN120.raw SUBJECT_SAMPLE_FACTORS DUMMY9 170 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S170.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN170.raw SUBJECT_SAMPLE_FACTORS DUMMY223 119 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S119.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN119.raw SUBJECT_SAMPLE_FACTORS DUMMY225 117 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S117.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN117.raw SUBJECT_SAMPLE_FACTORS DUMMY226 122 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S122.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN122.raw SUBJECT_SAMPLE_FACTORS DUMMY227 123 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S123.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN123.raw SUBJECT_SAMPLE_FACTORS DUMMY12 173 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S173.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN173.raw SUBJECT_SAMPLE_FACTORS DUMMY13 177 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S177.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN177.raw SUBJECT_SAMPLE_FACTORS DUMMY228 125 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S125.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN125.raw SUBJECT_SAMPLE_FACTORS DUMMY17 178 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S178.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN178.raw SUBJECT_SAMPLE_FACTORS DUMMY233 129 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S129.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN129.raw SUBJECT_SAMPLE_FACTORS DUMMY48 247 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S247.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN247.raw SUBJECT_SAMPLE_FACTORS DUMMY43 246 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S246.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN246.raw SUBJECT_SAMPLE_FACTORS DUMMY234 130 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S130.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN130.raw SUBJECT_SAMPLE_FACTORS DUMMY47 250 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S250.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN250.raw SUBJECT_SAMPLE_FACTORS DUMMY235 131 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S131.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN131.raw SUBJECT_SAMPLE_FACTORS DUMMY237 136 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S136.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN136.raw SUBJECT_SAMPLE_FACTORS DUMMY50 253 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S253.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN253.raw SUBJECT_SAMPLE_FACTORS DUMMY52 255 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S255.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN255.raw SUBJECT_SAMPLE_FACTORS DUMMY239 134 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S134.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN134.raw SUBJECT_SAMPLE_FACTORS DUMMY240 133 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S133.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN133.raw SUBJECT_SAMPLE_FACTORS DUMMY243 139 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S139.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN139.raw SUBJECT_SAMPLE_FACTORS DUMMY244 140 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S140.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN140.raw SUBJECT_SAMPLE_FACTORS DUMMY54 257 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S257.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN257.raw SUBJECT_SAMPLE_FACTORS DUMMY245 144 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S144.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN144.raw SUBJECT_SAMPLE_FACTORS DUMMY246 143 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S143.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN143.raw SUBJECT_SAMPLE_FACTORS DUMMY249 145 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S145.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN145.raw SUBJECT_SAMPLE_FACTORS DUMMY253 152 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S152.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN152.raw SUBJECT_SAMPLE_FACTORS DUMMY257 153 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S153.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN153.raw SUBJECT_SAMPLE_FACTORS DUMMY258 154 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S154.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN154.raw SUBJECT_SAMPLE_FACTORS DUMMY260 156 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S156.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN156.raw SUBJECT_SAMPLE_FACTORS DUMMY263 158 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S158.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN158.raw SUBJECT_SAMPLE_FACTORS DUMMY38 198 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S198.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN198.raw SUBJECT_SAMPLE_FACTORS DUMMY116 5 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S5.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN5.raw SUBJECT_SAMPLE_FACTORS DUMMY120 1 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S1.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN1.raw SUBJECT_SAMPLE_FACTORS DUMMY124 12 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S12.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN12.raw SUBJECT_SAMPLE_FACTORS DUMMY127 14 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S14.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN14.raw SUBJECT_SAMPLE_FACTORS DUMMY130 18 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S18.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN18.raw SUBJECT_SAMPLE_FACTORS DUMMY132 20 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S20.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN20.raw SUBJECT_SAMPLE_FACTORS DUMMY133 24 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S24.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN24.raw SUBJECT_SAMPLE_FACTORS DUMMY18 179 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S179.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN179.raw SUBJECT_SAMPLE_FACTORS DUMMY136 21 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S21.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN21.raw SUBJECT_SAMPLE_FACTORS DUMMY140 28 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S28.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN28.raw SUBJECT_SAMPLE_FACTORS DUMMY141 32 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S32.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN32.raw SUBJECT_SAMPLE_FACTORS DUMMY19 180 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S180.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN180.raw SUBJECT_SAMPLE_FACTORS DUMMY67 372 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S372.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN372.raw SUBJECT_SAMPLE_FACTORS DUMMY20 181 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S181.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN181.raw SUBJECT_SAMPLE_FACTORS DUMMY145 34 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S34.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN34.raw SUBJECT_SAMPLE_FACTORS DUMMY148 38 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S38.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN38.raw SUBJECT_SAMPLE_FACTORS DUMMY68 284 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S284.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN284.raw SUBJECT_SAMPLE_FACTORS DUMMY77 320 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S320.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN320.raw SUBJECT_SAMPLE_FACTORS DUMMY69 285 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S285.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN285.raw SUBJECT_SAMPLE_FACTORS DUMMY32 195 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S195.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN195.raw SUBJECT_SAMPLE_FACTORS DUMMY70 289 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S289.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN289.raw SUBJECT_SAMPLE_FACTORS DUMMY153 48 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S48.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN48.raw SUBJECT_SAMPLE_FACTORS DUMMY154 47 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S47.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN47.raw SUBJECT_SAMPLE_FACTORS DUMMY61 288 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S288.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN288.raw SUBJECT_SAMPLE_FACTORS DUMMY157 49 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S49.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN49.raw SUBJECT_SAMPLE_FACTORS DUMMY45 260 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S260.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN260.raw SUBJECT_SAMPLE_FACTORS DUMMY163 53 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S53.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN53.raw SUBJECT_SAMPLE_FACTORS DUMMY72 356 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S356.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN356.raw SUBJECT_SAMPLE_FACTORS DUMMY164 57 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S57.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN57.raw SUBJECT_SAMPLE_FACTORS DUMMY170 65 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S65.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN65.raw SUBJECT_SAMPLE_FACTORS DUMMY62 361 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S361.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN361.raw SUBJECT_SAMPLE_FACTORS DUMMY78 360 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S360.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN360.raw SUBJECT_SAMPLE_FACTORS DUMMY176 70 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S70.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN70.raw SUBJECT_SAMPLE_FACTORS DUMMY177 69 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S69.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN69.raw SUBJECT_SAMPLE_FACTORS DUMMY179 74 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S74.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN74.raw SUBJECT_SAMPLE_FACTORS DUMMY181 76 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S76.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN76.raw SUBJECT_SAMPLE_FACTORS DUMMY184 78 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S78.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN78.raw SUBJECT_SAMPLE_FACTORS DUMMY79 355 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S355.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN355.raw SUBJECT_SAMPLE_FACTORS DUMMY186 81 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S81.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN81.raw SUBJECT_SAMPLE_FACTORS DUMMY33 196 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S196.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN196.raw SUBJECT_SAMPLE_FACTORS DUMMY80 359 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S359.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN359.raw SUBJECT_SAMPLE_FACTORS DUMMY71 319 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S319.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN319.raw SUBJECT_SAMPLE_FACTORS DUMMY189 84 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S84.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN84.raw SUBJECT_SAMPLE_FACTORS DUMMY191 87 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S87.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN87.raw SUBJECT_SAMPLE_FACTORS DUMMY63 282 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S282.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN282.raw SUBJECT_SAMPLE_FACTORS DUMMY26 189 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S189.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN189.raw SUBJECT_SAMPLE_FACTORS DUMMY196 91 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S91.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN91.raw SUBJECT_SAMPLE_FACTORS DUMMY197 92 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S92.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN92.raw SUBJECT_SAMPLE_FACTORS DUMMY27 193 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S193.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN193.raw SUBJECT_SAMPLE_FACTORS DUMMY199 95 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S95.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN95.raw SUBJECT_SAMPLE_FACTORS DUMMY201 93 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S93.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN93.raw SUBJECT_SAMPLE_FACTORS DUMMY202 97 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S97.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN97.raw SUBJECT_SAMPLE_FACTORS DUMMY205 100 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S100.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN100.raw SUBJECT_SAMPLE_FACTORS DUMMY29 191 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S191.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN191.raw SUBJECT_SAMPLE_FACTORS DUMMY209 101 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S101.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN101.raw SUBJECT_SAMPLE_FACTORS DUMMY210 105 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S105.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN105.raw SUBJECT_SAMPLE_FACTORS DUMMY211 106 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S106.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN106.raw SUBJECT_SAMPLE_FACTORS DUMMY216 110 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S110.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN110.raw SUBJECT_SAMPLE_FACTORS DUMMY42 248 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S248.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN248.raw SUBJECT_SAMPLE_FACTORS DUMMY73 351 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S351.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN351.raw SUBJECT_SAMPLE_FACTORS DUMMY11 172 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S172.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN172.raw SUBJECT_SAMPLE_FACTORS DUMMY64 368 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S368.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN368.raw SUBJECT_SAMPLE_FACTORS DUMMY65 369 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S369.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN369.raw SUBJECT_SAMPLE_FACTORS DUMMY66 370 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S370.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN370.raw SUBJECT_SAMPLE_FACTORS DUMMY231 126 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S126.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN126.raw SUBJECT_SAMPLE_FACTORS DUMMY232 124 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S124.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN124.raw SUBJECT_SAMPLE_FACTORS DUMMY74 371 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S371.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN371.raw SUBJECT_SAMPLE_FACTORS DUMMY75 352 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S352.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN352.raw SUBJECT_SAMPLE_FACTORS DUMMY49 251 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S251.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN251.raw SUBJECT_SAMPLE_FACTORS DUMMY236 132 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S132.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN132.raw SUBJECT_SAMPLE_FACTORS DUMMY51 256 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S256.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN256.raw SUBJECT_SAMPLE_FACTORS DUMMY81 350 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S350.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN350.raw SUBJECT_SAMPLE_FACTORS DUMMY242 138 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S138.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN138.raw SUBJECT_SAMPLE_FACTORS DUMMY76 354 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S354.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN354.raw SUBJECT_SAMPLE_FACTORS DUMMY247 142 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S142.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN142.raw SUBJECT_SAMPLE_FACTORS DUMMY248 141 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S141.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN141.raw SUBJECT_SAMPLE_FACTORS DUMMY250 146 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S146.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN146.raw SUBJECT_SAMPLE_FACTORS DUMMY251 147 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S147.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN147.raw SUBJECT_SAMPLE_FACTORS DUMMY252 148 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S148.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN148.raw SUBJECT_SAMPLE_FACTORS DUMMY255 150 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S150.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN150.raw SUBJECT_SAMPLE_FACTORS DUMMY256 149 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S149.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN149.raw SUBJECT_SAMPLE_FACTORS DUMMY259 155 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S155.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN155.raw SUBJECT_SAMPLE_FACTORS DUMMY261 160 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S160.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN160.raw SUBJECT_SAMPLE_FACTORS DUMMY262 159 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S159.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN159.raw SUBJECT_SAMPLE_FACTORS DUMMY264 157 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S157.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN157.raw SUBJECT_SAMPLE_FACTORS DUMMY265 161 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S161.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN161.raw #COLLECTION CO:COLLECTION_SUMMARY Stool samples were collected from participants during their first Multicenter CO:COLLECTION_SUMMARY AIDS Cohort Study (MACS) clinic visit and were preserved at −80°C without CO:COLLECTION_SUMMARY additives or preservatives. Stools were sampled in 20 ml screw-capped glass CO:COLLECTION_SUMMARY vials at home and delivered to the clinic within one day by the participants. CO:COLLECTION_SUMMARY (Chen et al 2021, Microbiome) CO:SAMPLE_TYPE Stool #TREATMENT TR:TREATMENT_SUMMARY This study includes Men who have Sex with Men (MSM) enrolled in the Multicenter TR:TREATMENT_SUMMARY AIDS Cohort study (MACS). All participants were HIV-1-negative during their TR:TREATMENT_SUMMARY first MACS clinic visit when samples were collected. This study compares gut, TR:TREATMENT_SUMMARY plasma, and oral metabolic profiles between those who became infected with HIV-1 TR:TREATMENT_SUMMARY by their second study clinic visit approximately 6 months later (termed Pre-HIV) TR:TREATMENT_SUMMARY and those who remained HIV-negative (termed Non-HIV) at their second MACS clinic TR:TREATMENT_SUMMARY visit. #SAMPLEPREP SP:SAMPLEPREP_SUMMARY Sample were thawed on ice and weigh about 100 mg sample into tube, added with SP:SAMPLEPREP_SUMMARY 800 μL 80% methanol. All samples were vortexed 30 s, ground 90 s at 65 Hz, SP:SAMPLEPREP_SUMMARY followed by sonication for 30 min, 4°C. Then each sample was kept at -20°C for SP:SAMPLEPREP_SUMMARY 1 h, vortexed for 30 s and kept at 4°C for 30 min. After that, samples were SP:SAMPLEPREP_SUMMARY centrifuged at 12,000 rpm and 4°C for 15 min. All the supernatant was SP:SAMPLEPREP_SUMMARY transferred to a new tube, keep at -20°C for 1 h, centrifuged at 12,000 rpm and SP:SAMPLEPREP_SUMMARY 4°C for 15 min. Finally, 200 μL of supernatant into vial and 5 μL of 0.14 SP:SAMPLEPREP_SUMMARY mg/mL DL-o-Chlorophenylalanine as internal standard filtered through a 0.22 μm SP:SAMPLEPREP_SUMMARY filter for LC-MS analysis. #CHROMATOGRAPHY CH:CHROMATOGRAPHY_TYPE Reversed phase CH:INSTRUMENT_NAME Waters Acquity CH:COLUMN_NAME Waters ACQUITY UPLC HSS T3 (100 x 2.1 mm, 1.8 μm) CH:SOLVENT_A 100% Water; 0.05% Formic acid CH:SOLVENT_B 100% Acetonitrile CH:FLOW_GRADIENT 0-1.0 min, 5% B; 1.0-12.5 min, 5%-95% B; 12.5-13.5 min, 95% B; 13.5-13.6 min, CH:FLOW_GRADIENT 95%-5% B; 13.6-16 min, 5% B CH:FLOW_RATE 0.3 mL/min CH:COLUMN_TEMPERATURE 40°C #ANALYSIS AN:ANALYSIS_TYPE MS #MS MS:INSTRUMENT_NAME Thermo Q Exactive Orbitrap MS:INSTRUMENT_TYPE Orbitrap MS:MS_TYPE ESI MS:ION_MODE POSITIVE MS:MS_COMMENTS The electrospray ionization positive mode was operated using following MS:MS_COMMENTS conditions: heater temperature of 300°C, sheath gas flow rate of 45 arb, aux MS:MS_COMMENTS gas flow rate of 15 arb, sweep gas flow rate of 1 arb, spray voltage of 3.0 KV, MS:MS_COMMENTS capillary temperature of 350°C and S-Lens RF level set constant at 30%.The full MS:MS_COMMENTS scan was performed 70-1050 m/z at the resolution of 70,000 fwhm, automatic gain MS:MS_COMMENTS control (AGC) target of 3×106, maximum injection time of 100 ms and spectrum MS:MS_COMMENTS data type of centroid. Significant features were identified using data-dependent MS:MS_COMMENTS MS2. Settings for dd-MS2 data acquisition was as follows, resolution of 17,500 MS:MS_COMMENTS fwhm, AGC target of 1×105, maximum injection time of 50 ms, isolation window of MS:MS_COMMENTS 1.7 m/z, loop count of 10, and normalized collision energy (NCE) was set at 15, MS:MS_COMMENTS 30 and 45 eV, spectrum data type of centroid. The Compound Discoverer 3.1 MS:MS_COMMENTS (CD3.1, Thermo Fisher) software was used to process raw data generated by the MS:MS_COMMENTS UPLC-MS via peak alignment, peak picking, and identification of each metabolite. MS:MS_COMMENTS After analysis, these data were matched with the mzCloud, mzVault databases to MS:MS_COMMENTS obtain accurate identification results. The data was further processed by MS:MS_COMMENTS Progenesis QI to provide strong support for identifying metabolites accurately. MS:MS_RESULTS_FILE ST004210_AN007002_Results.txt UNITS:Peak area Has m/z:Yes Has RT:Yes RT units:Minutes #END #METABOLOMICS WORKBENCH ffouladi_20250228_085650 DATATRACK_ID:5687 STUDY_ID:ST004210 ANALYSIS_ID:AN007002 PROJECT_ID:PR002653 VERSION 1 CREATED_ON September 22, 2025, 7:17 pm #PROJECT PR:PROJECT_TITLE A taxon-specific measurement of disruption in a multi-modal study of microbiomes PR:PROJECT_TITLE and metabolomes reveals system-wide dysbiosis preceding HIV-1 infection PR:PROJECT_SUMMARY The microbiome is important in immune responses and inflammation in HIV-1 PR:PROJECT_SUMMARY infection. Hence, a deeper understanding of the microbiome prior to HIV-1 PR:PROJECT_SUMMARY infection is potentially important for HIV-1 prevention strategies. Using stool, PR:PROJECT_SUMMARY oral washes, and plasma biospecimens obtained from HIV-1 negative men who have PR:PROJECT_SUMMARY sex with men (MSM), we found several differences in microbial ecologies, gene PR:PROJECT_SUMMARY functions, and metabolites between MSM who became HIV-1 infected approximately 6 PR:PROJECT_SUMMARY months later and those who remained HIV-1 uninfected. The HIV-1 infected MSM had PR:PROJECT_SUMMARY an enrichment of enzymes involved in purine metabolism, lower amino acid PR:PROJECT_SUMMARY metabolism, and higher oxidative stress before the infection. Using a novel PR:PROJECT_SUMMARY taxon-specific measure of DISruption in COrrelations (DISCO) with various data PR:PROJECT_SUMMARY modalities, we identified several gut and oral species with disrupted PR:PROJECT_SUMMARY correlations prior to HIV-1 infection. Application of DISCO to external datasets PR:PROJECT_SUMMARY revealed that Prevotella spp. are consistently disrupted in their correlations PR:PROJECT_SUMMARY across multiple cohorts prior to or following HIV-1 infection. PR:INSTITUTE National Institute of Environmental Health Sciences PR:LAST_NAME Fouladi PR:FIRST_NAME Farnaz PR:ADDRESS 111 T.W. Alexander Drive, Durham, NC 27709 PR:EMAIL farnaz.fouladi@nih.gov PR:PHONE 984-287-4663 #STUDY ST:STUDY_TITLE Stool Metabolomics Profiling in Men Who Have Sex with Men Before HIV-1 Infection ST:STUDY_SUMMARY This study includes Men who have Sex with Men (MSM) enrolled in the Multicenter ST:STUDY_SUMMARY AIDS Cohort study (MACS) between 1984-1985. All participants were HIV-1-negative ST:STUDY_SUMMARY during their first MACS clinic visit, when samples were collected. Metabolic ST:STUDY_SUMMARY profiles are compared between those who were infected with HIV-1 by their second ST:STUDY_SUMMARY study clinic visit approximately 6 months later (termed Pre-HIV) and those who ST:STUDY_SUMMARY remained HIV-negative (termed Non-HIV) at their second MACS clinic visit. Data ST:STUDY_SUMMARY Availability : Access to individual-level data from the MACS/WIHS Combined ST:STUDY_SUMMARY Cohort Study Data (MWCCS) may be obtained upon review and approval of a MWCCS ST:STUDY_SUMMARY concept sheet. Links and instructions for online concept sheet submission are on ST:STUDY_SUMMARY the study website (http://mwccs.org/). Once the concept sheet is approved, ST:STUDY_SUMMARY please contact Dr. Yue Chen (cheny@pitt.edu) to obtain the metadata. ST:INSTITUTE National Institute of Environmental Health Sciences ST:LAST_NAME Fouladi ST:FIRST_NAME Farnaz ST:ADDRESS 111 T.W. Alexander Drive, Durham, NC 27709 ST:EMAIL farnaz.fouladi@nih.gov ST:PHONE 984-287-4663 #SUBJECT SU:SUBJECT_TYPE Human SU:SUBJECT_SPECIES Homo sapiens SU:TAXONOMY_ID 9606 #SUBJECT_SAMPLE_FACTORS: SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Raw file names and additional sample data SUBJECT_SAMPLE_FACTORS DUMMY82 308 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S308.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN308.raw SUBJECT_SAMPLE_FACTORS DUMMY83 291 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S291.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN291.raw SUBJECT_SAMPLE_FACTORS DUMMY84 286 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S286.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN286.raw SUBJECT_SAMPLE_FACTORS DUMMY85 293 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S293.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN293.raw SUBJECT_SAMPLE_FACTORS DUMMY86 307 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S307.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN307.raw SUBJECT_SAMPLE_FACTORS DUMMY87 301 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S301.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN301.raw SUBJECT_SAMPLE_FACTORS DUMMY113 8 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S8.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN8.raw SUBJECT_SAMPLE_FACTORS DUMMY88 305 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S305.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN305.raw SUBJECT_SAMPLE_FACTORS DUMMY89 321 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S321.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN321.raw SUBJECT_SAMPLE_FACTORS DUMMY114 7 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S7.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN7.raw SUBJECT_SAMPLE_FACTORS DUMMY90 317 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S317.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN317.raw SUBJECT_SAMPLE_FACTORS DUMMY91 312 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S312.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN312.raw SUBJECT_SAMPLE_FACTORS DUMMY92 290 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S290.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN290.raw SUBJECT_SAMPLE_FACTORS DUMMY93 295 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S295.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN295.raw SUBJECT_SAMPLE_FACTORS DUMMY94 316 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S316.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN316.raw SUBJECT_SAMPLE_FACTORS DUMMY95 315 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S315.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN315.raw SUBJECT_SAMPLE_FACTORS DUMMY96 302 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S302.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN302.raw SUBJECT_SAMPLE_FACTORS DUMMY97 300 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S300.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN300.raw SUBJECT_SAMPLE_FACTORS DUMMY99 297 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S297.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN297.raw SUBJECT_SAMPLE_FACTORS DUMMY100 304 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S304.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN304.raw SUBJECT_SAMPLE_FACTORS DUMMY101 310 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S310.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN310.raw SUBJECT_SAMPLE_FACTORS DUMMY102 299 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S299.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN299.raw SUBJECT_SAMPLE_FACTORS DUMMY115 6 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S6.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN6.raw SUBJECT_SAMPLE_FACTORS DUMMY103 298 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S298.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN298.raw SUBJECT_SAMPLE_FACTORS DUMMY104 306 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S306.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN306.raw SUBJECT_SAMPLE_FACTORS DUMMY105 309 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S309.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN309.raw SUBJECT_SAMPLE_FACTORS DUMMY106 294 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S294.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN294.raw SUBJECT_SAMPLE_FACTORS DUMMY107 311 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S311.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN311.raw SUBJECT_SAMPLE_FACTORS DUMMY108 296 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S296.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN296.raw SUBJECT_SAMPLE_FACTORS DUMMY117 2 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S2.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN2.raw SUBJECT_SAMPLE_FACTORS DUMMY110 292 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S292.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN292.raw SUBJECT_SAMPLE_FACTORS DUMMY111 287 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S287.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN287.raw SUBJECT_SAMPLE_FACTORS DUMMY118 3 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S3.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN3.raw SUBJECT_SAMPLE_FACTORS DUMMY119 4 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S4.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN4.raw SUBJECT_SAMPLE_FACTORS DUMMY121 9 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S9.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN9.raw SUBJECT_SAMPLE_FACTORS DUMMY122 10 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S10.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN10.raw SUBJECT_SAMPLE_FACTORS DUMMY123 11 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S11.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN11.raw SUBJECT_SAMPLE_FACTORS DUMMY126 15 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S15.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN15.raw SUBJECT_SAMPLE_FACTORS DUMMY131 19 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S19.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN19.raw SUBJECT_SAMPLE_FACTORS DUMMY134 23 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S23.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN23.raw SUBJECT_SAMPLE_FACTORS DUMMY135 22 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S22.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN22.raw SUBJECT_SAMPLE_FACTORS DUMMY137 25 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S25.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN25.raw SUBJECT_SAMPLE_FACTORS DUMMY138 26 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S26.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN26.raw SUBJECT_SAMPLE_FACTORS DUMMY139 27 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S27.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN27.raw SUBJECT_SAMPLE_FACTORS DUMMY142 30 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S30.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN30.raw SUBJECT_SAMPLE_FACTORS DUMMY143 29 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S29.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN29.raw SUBJECT_SAMPLE_FACTORS DUMMY149 37 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S37.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN37.raw SUBJECT_SAMPLE_FACTORS DUMMY39 204 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S204.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN204.raw SUBJECT_SAMPLE_FACTORS DUMMY151 42 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S42.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN42.raw SUBJECT_SAMPLE_FACTORS DUMMY35 201 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S201.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN201.raw SUBJECT_SAMPLE_FACTORS DUMMY152 44 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S44.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN44.raw SUBJECT_SAMPLE_FACTORS DUMMY36 200 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S200.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN200.raw SUBJECT_SAMPLE_FACTORS DUMMY155 46 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S46.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN46.raw SUBJECT_SAMPLE_FACTORS DUMMY156 45 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S45.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN45.raw SUBJECT_SAMPLE_FACTORS DUMMY55 254 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S254.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN254.raw SUBJECT_SAMPLE_FACTORS DUMMY56 258 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S258.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN258.raw SUBJECT_SAMPLE_FACTORS DUMMY44 220 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S220.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN220.raw SUBJECT_SAMPLE_FACTORS DUMMY57 259 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S259.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN259.raw SUBJECT_SAMPLE_FACTORS DUMMY159 52 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S52.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN52.raw SUBJECT_SAMPLE_FACTORS DUMMY160 56 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S56.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN56.raw SUBJECT_SAMPLE_FACTORS DUMMY162 54 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S54.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN54.raw SUBJECT_SAMPLE_FACTORS DUMMY58 261 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S261.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN261.raw SUBJECT_SAMPLE_FACTORS DUMMY59 265 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S265.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN265.raw SUBJECT_SAMPLE_FACTORS DUMMY31 194 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S194.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN194.raw SUBJECT_SAMPLE_FACTORS DUMMY165 58 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S58.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN58.raw SUBJECT_SAMPLE_FACTORS DUMMY166 59 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S59.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN59.raw SUBJECT_SAMPLE_FACTORS DUMMY34 197 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S197.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN197.raw SUBJECT_SAMPLE_FACTORS DUMMY1 162 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S162.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN162.raw SUBJECT_SAMPLE_FACTORS DUMMY171 66 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S66.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN66.raw SUBJECT_SAMPLE_FACTORS DUMMY2 163 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S163.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN163.raw SUBJECT_SAMPLE_FACTORS DUMMY3 164 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S164.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN164.raw SUBJECT_SAMPLE_FACTORS DUMMY4 165 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S165.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN165.raw SUBJECT_SAMPLE_FACTORS DUMMY6 168 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S168.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN168.raw SUBJECT_SAMPLE_FACTORS DUMMY5 169 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S169.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN169.raw SUBJECT_SAMPLE_FACTORS DUMMY172 67 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S67.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN67.raw SUBJECT_SAMPLE_FACTORS DUMMY174 72 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S72.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN72.raw SUBJECT_SAMPLE_FACTORS DUMMY175 71 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S71.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN71.raw SUBJECT_SAMPLE_FACTORS DUMMY178 73 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S73.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN73.raw SUBJECT_SAMPLE_FACTORS DUMMY180 75 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S75.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN75.raw SUBJECT_SAMPLE_FACTORS DUMMY182 80 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S80.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN80.raw SUBJECT_SAMPLE_FACTORS DUMMY183 79 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S79.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN79.raw SUBJECT_SAMPLE_FACTORS DUMMY185 77 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S77.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN77.raw SUBJECT_SAMPLE_FACTORS DUMMY37 199 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S199.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN199.raw SUBJECT_SAMPLE_FACTORS DUMMY187 82 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S82.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN82.raw SUBJECT_SAMPLE_FACTORS DUMMY21 183 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S183.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN183.raw SUBJECT_SAMPLE_FACTORS DUMMY22 182 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S182.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN182.raw SUBJECT_SAMPLE_FACTORS DUMMY40 205 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S205.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN205.raw SUBJECT_SAMPLE_FACTORS DUMMY41 209 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S209.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN209.raw SUBJECT_SAMPLE_FACTORS DUMMY188 83 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S83.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN83.raw SUBJECT_SAMPLE_FACTORS DUMMY190 88 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S88.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN88.raw SUBJECT_SAMPLE_FACTORS DUMMY23 186 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S186.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN186.raw SUBJECT_SAMPLE_FACTORS DUMMY192 86 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S86.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN86.raw SUBJECT_SAMPLE_FACTORS DUMMY193 85 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S85.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN85.raw SUBJECT_SAMPLE_FACTORS DUMMY25 188 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S188.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN188.raw SUBJECT_SAMPLE_FACTORS DUMMY60 264 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S264.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN264.raw SUBJECT_SAMPLE_FACTORS DUMMY195 90 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S90.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN90.raw SUBJECT_SAMPLE_FACTORS DUMMY30 190 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S190.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN190.raw SUBJECT_SAMPLE_FACTORS DUMMY198 96 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S96.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN96.raw SUBJECT_SAMPLE_FACTORS DUMMY24 187 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S187.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN187.raw SUBJECT_SAMPLE_FACTORS DUMMY200 94 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S94.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN94.raw SUBJECT_SAMPLE_FACTORS DUMMY46 263 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S263.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN263.raw SUBJECT_SAMPLE_FACTORS DUMMY203 98 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S98.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN98.raw SUBJECT_SAMPLE_FACTORS DUMMY204 99 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S99.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN99.raw SUBJECT_SAMPLE_FACTORS DUMMY206 104 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S104.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN104.raw SUBJECT_SAMPLE_FACTORS DUMMY28 192 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S192.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN192.raw SUBJECT_SAMPLE_FACTORS DUMMY207 103 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S103.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN103.raw SUBJECT_SAMPLE_FACTORS DUMMY208 102 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S102.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN102.raw SUBJECT_SAMPLE_FACTORS DUMMY212 107 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S107.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN107.raw SUBJECT_SAMPLE_FACTORS DUMMY214 112 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S112.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN112.raw SUBJECT_SAMPLE_FACTORS DUMMY217 109 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S109.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN109.raw SUBJECT_SAMPLE_FACTORS DUMMY16 174 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S174.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN174.raw SUBJECT_SAMPLE_FACTORS DUMMY53 252 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S252.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN252.raw SUBJECT_SAMPLE_FACTORS DUMMY218 113 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S113.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN113.raw SUBJECT_SAMPLE_FACTORS DUMMY15 175 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S175.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN175.raw SUBJECT_SAMPLE_FACTORS DUMMY14 176 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S176.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN176.raw SUBJECT_SAMPLE_FACTORS DUMMY219 114 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S114.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN114.raw SUBJECT_SAMPLE_FACTORS DUMMY7 167 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S167.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN167.raw SUBJECT_SAMPLE_FACTORS DUMMY220 115 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S115.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN115.raw SUBJECT_SAMPLE_FACTORS DUMMY10 171 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S171.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN171.raw SUBJECT_SAMPLE_FACTORS DUMMY222 120 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S120.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN120.raw SUBJECT_SAMPLE_FACTORS DUMMY9 170 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S170.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN170.raw SUBJECT_SAMPLE_FACTORS DUMMY223 119 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S119.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN119.raw SUBJECT_SAMPLE_FACTORS DUMMY225 117 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S117.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN117.raw SUBJECT_SAMPLE_FACTORS DUMMY226 122 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S122.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN122.raw SUBJECT_SAMPLE_FACTORS DUMMY227 123 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S123.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN123.raw SUBJECT_SAMPLE_FACTORS DUMMY12 173 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S173.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN173.raw SUBJECT_SAMPLE_FACTORS DUMMY13 177 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S177.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN177.raw SUBJECT_SAMPLE_FACTORS DUMMY228 125 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S125.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN125.raw SUBJECT_SAMPLE_FACTORS DUMMY17 178 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S178.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN178.raw SUBJECT_SAMPLE_FACTORS DUMMY233 129 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S129.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN129.raw SUBJECT_SAMPLE_FACTORS DUMMY48 247 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S247.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN247.raw SUBJECT_SAMPLE_FACTORS DUMMY43 246 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S246.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN246.raw SUBJECT_SAMPLE_FACTORS DUMMY234 130 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S130.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN130.raw SUBJECT_SAMPLE_FACTORS DUMMY47 250 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S250.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN250.raw SUBJECT_SAMPLE_FACTORS DUMMY235 131 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S131.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN131.raw SUBJECT_SAMPLE_FACTORS DUMMY237 136 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S136.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN136.raw SUBJECT_SAMPLE_FACTORS DUMMY50 253 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S253.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN253.raw SUBJECT_SAMPLE_FACTORS DUMMY52 255 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S255.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN255.raw SUBJECT_SAMPLE_FACTORS DUMMY239 134 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S134.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN134.raw SUBJECT_SAMPLE_FACTORS DUMMY240 133 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S133.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN133.raw SUBJECT_SAMPLE_FACTORS DUMMY243 139 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S139.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN139.raw SUBJECT_SAMPLE_FACTORS DUMMY244 140 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S140.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN140.raw SUBJECT_SAMPLE_FACTORS DUMMY54 257 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S257.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN257.raw SUBJECT_SAMPLE_FACTORS DUMMY245 144 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S144.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN144.raw SUBJECT_SAMPLE_FACTORS DUMMY246 143 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S143.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN143.raw SUBJECT_SAMPLE_FACTORS DUMMY249 145 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S145.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN145.raw SUBJECT_SAMPLE_FACTORS DUMMY253 152 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S152.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN152.raw SUBJECT_SAMPLE_FACTORS DUMMY257 153 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S153.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN153.raw SUBJECT_SAMPLE_FACTORS DUMMY258 154 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S154.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN154.raw SUBJECT_SAMPLE_FACTORS DUMMY260 156 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S156.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN156.raw SUBJECT_SAMPLE_FACTORS DUMMY263 158 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S158.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN158.raw SUBJECT_SAMPLE_FACTORS DUMMY38 198 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S198.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN198.raw SUBJECT_SAMPLE_FACTORS DUMMY116 5 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S5.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN5.raw SUBJECT_SAMPLE_FACTORS DUMMY120 1 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S1.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN1.raw SUBJECT_SAMPLE_FACTORS DUMMY124 12 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S12.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN12.raw SUBJECT_SAMPLE_FACTORS DUMMY127 14 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S14.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN14.raw SUBJECT_SAMPLE_FACTORS DUMMY130 18 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S18.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN18.raw SUBJECT_SAMPLE_FACTORS DUMMY132 20 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S20.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN20.raw SUBJECT_SAMPLE_FACTORS DUMMY133 24 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S24.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN24.raw SUBJECT_SAMPLE_FACTORS DUMMY18 179 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S179.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN179.raw SUBJECT_SAMPLE_FACTORS DUMMY136 21 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S21.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN21.raw SUBJECT_SAMPLE_FACTORS DUMMY140 28 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S28.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN28.raw SUBJECT_SAMPLE_FACTORS DUMMY141 32 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S32.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN32.raw SUBJECT_SAMPLE_FACTORS DUMMY19 180 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S180.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN180.raw SUBJECT_SAMPLE_FACTORS DUMMY67 372 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S372.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN372.raw SUBJECT_SAMPLE_FACTORS DUMMY20 181 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S181.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN181.raw SUBJECT_SAMPLE_FACTORS DUMMY145 34 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S34.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN34.raw SUBJECT_SAMPLE_FACTORS DUMMY148 38 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S38.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN38.raw SUBJECT_SAMPLE_FACTORS DUMMY68 284 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S284.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN284.raw SUBJECT_SAMPLE_FACTORS DUMMY77 320 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S320.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN320.raw SUBJECT_SAMPLE_FACTORS DUMMY69 285 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S285.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN285.raw SUBJECT_SAMPLE_FACTORS DUMMY32 195 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S195.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN195.raw SUBJECT_SAMPLE_FACTORS DUMMY70 289 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S289.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN289.raw SUBJECT_SAMPLE_FACTORS DUMMY153 48 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S48.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN48.raw SUBJECT_SAMPLE_FACTORS DUMMY154 47 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S47.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN47.raw SUBJECT_SAMPLE_FACTORS DUMMY61 288 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S288.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN288.raw SUBJECT_SAMPLE_FACTORS DUMMY157 49 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S49.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN49.raw SUBJECT_SAMPLE_FACTORS DUMMY45 260 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S260.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN260.raw SUBJECT_SAMPLE_FACTORS DUMMY163 53 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S53.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN53.raw SUBJECT_SAMPLE_FACTORS DUMMY72 356 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S356.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN356.raw SUBJECT_SAMPLE_FACTORS DUMMY164 57 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S57.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN57.raw SUBJECT_SAMPLE_FACTORS DUMMY170 65 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S65.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN65.raw SUBJECT_SAMPLE_FACTORS DUMMY62 361 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S361.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN361.raw SUBJECT_SAMPLE_FACTORS DUMMY78 360 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S360.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN360.raw SUBJECT_SAMPLE_FACTORS DUMMY176 70 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S70.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN70.raw SUBJECT_SAMPLE_FACTORS DUMMY177 69 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S69.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN69.raw SUBJECT_SAMPLE_FACTORS DUMMY179 74 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S74.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN74.raw SUBJECT_SAMPLE_FACTORS DUMMY181 76 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S76.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN76.raw SUBJECT_SAMPLE_FACTORS DUMMY184 78 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S78.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN78.raw SUBJECT_SAMPLE_FACTORS DUMMY79 355 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S355.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN355.raw SUBJECT_SAMPLE_FACTORS DUMMY186 81 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S81.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN81.raw SUBJECT_SAMPLE_FACTORS DUMMY33 196 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S196.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN196.raw SUBJECT_SAMPLE_FACTORS DUMMY80 359 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S359.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN359.raw SUBJECT_SAMPLE_FACTORS DUMMY71 319 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S319.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN319.raw SUBJECT_SAMPLE_FACTORS DUMMY189 84 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S84.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN84.raw SUBJECT_SAMPLE_FACTORS DUMMY191 87 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S87.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN87.raw SUBJECT_SAMPLE_FACTORS DUMMY63 282 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S282.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN282.raw SUBJECT_SAMPLE_FACTORS DUMMY26 189 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S189.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN189.raw SUBJECT_SAMPLE_FACTORS DUMMY196 91 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S91.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN91.raw SUBJECT_SAMPLE_FACTORS DUMMY197 92 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S92.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN92.raw SUBJECT_SAMPLE_FACTORS DUMMY27 193 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S193.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN193.raw SUBJECT_SAMPLE_FACTORS DUMMY199 95 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S95.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN95.raw SUBJECT_SAMPLE_FACTORS DUMMY201 93 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S93.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN93.raw SUBJECT_SAMPLE_FACTORS DUMMY202 97 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S97.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN97.raw SUBJECT_SAMPLE_FACTORS DUMMY205 100 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S100.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN100.raw SUBJECT_SAMPLE_FACTORS DUMMY29 191 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S191.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN191.raw SUBJECT_SAMPLE_FACTORS DUMMY209 101 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S101.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN101.raw SUBJECT_SAMPLE_FACTORS DUMMY210 105 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S105.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN105.raw SUBJECT_SAMPLE_FACTORS DUMMY211 106 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S106.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN106.raw SUBJECT_SAMPLE_FACTORS DUMMY216 110 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S110.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN110.raw SUBJECT_SAMPLE_FACTORS DUMMY42 248 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S248.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN248.raw SUBJECT_SAMPLE_FACTORS DUMMY73 351 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S351.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN351.raw SUBJECT_SAMPLE_FACTORS DUMMY11 172 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S172.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN172.raw SUBJECT_SAMPLE_FACTORS DUMMY64 368 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S368.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN368.raw SUBJECT_SAMPLE_FACTORS DUMMY65 369 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S369.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN369.raw SUBJECT_SAMPLE_FACTORS DUMMY66 370 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S370.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN370.raw SUBJECT_SAMPLE_FACTORS DUMMY231 126 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S126.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN126.raw SUBJECT_SAMPLE_FACTORS DUMMY232 124 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S124.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN124.raw SUBJECT_SAMPLE_FACTORS DUMMY74 371 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S371.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN371.raw SUBJECT_SAMPLE_FACTORS DUMMY75 352 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S352.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN352.raw SUBJECT_SAMPLE_FACTORS DUMMY49 251 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S251.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN251.raw SUBJECT_SAMPLE_FACTORS DUMMY236 132 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S132.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN132.raw SUBJECT_SAMPLE_FACTORS DUMMY51 256 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S256.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN256.raw SUBJECT_SAMPLE_FACTORS DUMMY81 350 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S350.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN350.raw SUBJECT_SAMPLE_FACTORS DUMMY242 138 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S138.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN138.raw SUBJECT_SAMPLE_FACTORS DUMMY76 354 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S354.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN354.raw SUBJECT_SAMPLE_FACTORS DUMMY247 142 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S142.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN142.raw SUBJECT_SAMPLE_FACTORS DUMMY248 141 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S141.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN141.raw SUBJECT_SAMPLE_FACTORS DUMMY250 146 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S146.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN146.raw SUBJECT_SAMPLE_FACTORS DUMMY251 147 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S147.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN147.raw SUBJECT_SAMPLE_FACTORS DUMMY252 148 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S148.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN148.raw SUBJECT_SAMPLE_FACTORS DUMMY255 150 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S150.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN150.raw SUBJECT_SAMPLE_FACTORS DUMMY256 149 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S149.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN149.raw SUBJECT_SAMPLE_FACTORS DUMMY259 155 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S155.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN155.raw SUBJECT_SAMPLE_FACTORS DUMMY261 160 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S160.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN160.raw SUBJECT_SAMPLE_FACTORS DUMMY262 159 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S159.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN159.raw SUBJECT_SAMPLE_FACTORS DUMMY264 157 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S157.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN157.raw SUBJECT_SAMPLE_FACTORS DUMMY265 161 Sample source:Stool | Group:A RAW_FILE_NAME(Raw_file_name_positive)=S161.raw; RAW_FILE_NAME(Raw_file_name_negative)=SN161.raw #COLLECTION CO:COLLECTION_SUMMARY Stool samples were collected from participants during their first Multicenter CO:COLLECTION_SUMMARY AIDS Cohort Study (MACS) clinic visit and were preserved at −80°C without CO:COLLECTION_SUMMARY additives or preservatives. Stools were sampled in 20 ml screw-capped glass CO:COLLECTION_SUMMARY vials at home and delivered to the clinic within one day by the participants. CO:COLLECTION_SUMMARY (Chen et al 2021, Microbiome) CO:SAMPLE_TYPE Stool #TREATMENT TR:TREATMENT_SUMMARY This study includes Men who have Sex with Men (MSM) enrolled in the Multicenter TR:TREATMENT_SUMMARY AIDS Cohort study (MACS). All participants were HIV-1-negative during their TR:TREATMENT_SUMMARY first MACS clinic visit when samples were collected. This study compares gut, TR:TREATMENT_SUMMARY plasma, and oral metabolic profiles between those who became infected with HIV-1 TR:TREATMENT_SUMMARY by their second study clinic visit approximately 6 months later (termed Pre-HIV) TR:TREATMENT_SUMMARY and those who remained HIV-negative (termed Non-HIV) at their second MACS clinic TR:TREATMENT_SUMMARY visit. #SAMPLEPREP SP:SAMPLEPREP_SUMMARY Sample were thawed on ice and weigh about 100 mg sample into tube, added with SP:SAMPLEPREP_SUMMARY 800 μL 80% methanol. All samples were vortexed 30 s, ground 90 s at 65 Hz, SP:SAMPLEPREP_SUMMARY followed by sonication for 30 min, 4°C. Then each sample was kept at -20°C for SP:SAMPLEPREP_SUMMARY 1 h, vortexed for 30 s and kept at 4°C for 30 min. After that, samples were SP:SAMPLEPREP_SUMMARY centrifuged at 12,000 rpm and 4°C for 15 min. All the supernatant was SP:SAMPLEPREP_SUMMARY transferred to a new tube, keep at -20°C for 1 h, centrifuged at 12,000 rpm and SP:SAMPLEPREP_SUMMARY 4°C for 15 min. Finally, 200 μL of supernatant into vial and 5 μL of 0.14 SP:SAMPLEPREP_SUMMARY mg/mL DL-o-Chlorophenylalanine as internal standard filtered through a 0.22 μm SP:SAMPLEPREP_SUMMARY filter for LC-MS analysis. #CHROMATOGRAPHY CH:CHROMATOGRAPHY_TYPE Reversed phase CH:INSTRUMENT_NAME Waters Acquity CH:COLUMN_NAME Waters ACQUITY UPLC HSS T3 (100 x 2.1 mm, 1.8 μm) CH:SOLVENT_A 100% Water; 0.05% Formic acid CH:SOLVENT_B 100% Acetonitrile CH:FLOW_GRADIENT 0-1.0 min, 5% B; 1.0-12.5 min, 5%-95% B; 12.5-13.5 min, 95% B; 13.5-13.6 min, CH:FLOW_GRADIENT 95%-5% B; 13.6-16 min, 5% B CH:FLOW_RATE 0.3 mL/min CH:COLUMN_TEMPERATURE 40°C #ANALYSIS AN:ANALYSIS_TYPE MS #MS MS:INSTRUMENT_NAME Thermo Q Exactive Orbitrap MS:INSTRUMENT_TYPE Orbitrap MS:MS_TYPE ESI MS:ION_MODE POSITIVE MS:MS_COMMENTS The electrospray ionization positive mode was operated using following MS:MS_COMMENTS conditions: heater temperature of 300°C, sheath gas flow rate of 45 arb, aux MS:MS_COMMENTS gas flow rate of 15 arb, sweep gas flow rate of 1 arb, spray voltage of 3.0 KV, MS:MS_COMMENTS capillary temperature of 350°C and S-Lens RF level set constant at 30%.The full MS:MS_COMMENTS scan was performed 70-1050 m/z at the resolution of 70,000 fwhm, automatic gain MS:MS_COMMENTS control (AGC) target of 3×106, maximum injection time of 100 ms and spectrum MS:MS_COMMENTS data type of centroid. Significant features were identified using data-dependent MS:MS_COMMENTS MS2. Settings for dd-MS2 data acquisition was as follows, resolution of 17,500 MS:MS_COMMENTS fwhm, AGC target of 1×105, maximum injection time of 50 ms, isolation window of MS:MS_COMMENTS 1.7 m/z, loop count of 10, and normalized collision energy (NCE) was set at 15, MS:MS_COMMENTS 30 and 45 eV, spectrum data type of centroid. The Compound Discoverer 3.1 MS:MS_COMMENTS (CD3.1, Thermo Fisher) software was used to process raw data generated by the MS:MS_COMMENTS UPLC-MS via peak alignment, peak picking, and identification of each metabolite. MS:MS_COMMENTS After analysis, these data were matched with the mzCloud, mzVault databases to MS:MS_COMMENTS obtain accurate identification results. The data was further processed by MS:MS_COMMENTS Progenesis QI to provide strong support for identifying metabolites accurately. MS:MS_RESULTS_FILE ST004210_AN007002_Results.txt UNITS:Peak area Has m/z:Yes Has RT:Yes RT units:Minutes #END