#METABOLOMICS WORKBENCH TEXT OUTPUT STUDY_ID:	ANALYSIS_ID:	
VERSION             	1
CREATED_ON          	2017-06-17
#PROJECT
PR:PROJECT_TITLE    	The Role of the Microbiome in Alcoholic Liver Disease
PR:PROJECT_TYPE     	MS analysis
PR:PROJECT_SUMMARY  	The effect of acetate on intestinal microorganisms
PR:INSTITUTE        	University of California
PR:DEPARTMENT       	Bioengineering
PR:LABORATORY       	Zengler, Karsten
PR:LAST_NAME        	Zengler
PR:FIRST_NAME       	Karsten
PR:ADDRESS          	San Diego, CA
PR:EMAIL            	kzengler@eng.ucsd.edu
PR:PHONE            	858-260-9458
PR:FUNDING_SOURCE   	
PR:PROJECT_COMMENTS 	
PR:PUBLICATIONS     	
#STUDY
ST:STUDY_TITLE      	The effect of acetate on intestinal microorganisms
ST:STUDY_TYPE       	MS analysis
ST:STUDY_SUMMARY    	8 week old B6 Male: HFD+ Glucose, 9 day feeding; Blood collection from tail every 3 days; mice were fed glycerol (control) or GTA with increasing concentrations; Day 1-3 0.1g/kg; Day 3-6 1g/kg; Day 6-9 6g/kg
ST:INSTITUTE        	University of Michigan
ST:DEPARTMENT       	Biomedical Research Core Facilities
ST:LABORATORY       	Metabolomics core
ST:LAST_NAME        	Kachman
ST:FIRST_NAME       	Maureen
ST:ADDRESS          	6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714
ST:EMAIL            	mkachman@med.umich.edu
ST:PHONE            	(734) 232-8175
ST:SUBMIT_DATE      	09/16/2015 02:03:59 PM
ST:NUM_GROUPS       	5
ST:TOTAL_SUBJECTS   	5
ST:STUDY_COMMENTS   	
#SUBJECT_SAMPLE_FACTORS:          	SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Additional sample data
SUBJECT_SAMPLE_FACTORS            	SU0019823	S00019591	Diet:GTA feeding | Dose:0.1 g/kg	
SUBJECT_SAMPLE_FACTORS            	SU0019824	S00019592	Diet:GTA feeding | Dose:0.1 g/kg	
SUBJECT_SAMPLE_FACTORS            	SU0019825	S00019593	Diet:GTA feeding | Dose:0.1 g/kg	
SUBJECT_SAMPLE_FACTORS            	SU0019826	S00019594	Diet:Glycerol feeding | Dose:0.1 g/kg	
SUBJECT_SAMPLE_FACTORS            	SU0019827	S00019595	Diet:Glycerol feeding | Dose:0.1 g/kg	
SUBJECT_SAMPLE_FACTORS            	SU0019823	S00019596	Diet:GTA feeding | Dose:1 g/kg	
SUBJECT_SAMPLE_FACTORS            	SU0019824	S00019597	Diet:GTA feeding | Dose:1 g/kg	
SUBJECT_SAMPLE_FACTORS            	SU0019826	S00019598	Diet:Glycerol feeding | Dose:1 g/kg	
SUBJECT_SAMPLE_FACTORS            	SU0019827	S00019599	Diet:Glycerol feeding | Dose:1 g/kg	
SUBJECT_SAMPLE_FACTORS            	SU0019823	S00019600	Diet:GTA feeding | Dose:6 g/kg	
SUBJECT_SAMPLE_FACTORS            	SU0019824	S00019601	Diet:GTA feeding | Dose:6 g/kg	
SUBJECT_SAMPLE_FACTORS            	SU0019825	S00019602	Diet:GTA feeding | Dose:6 g/kg	
SUBJECT_SAMPLE_FACTORS            	SU0019826	S00019603	Diet:Glycerol feeding | Dose:6 g/kg	
SUBJECT_SAMPLE_FACTORS            	SU0019827	S00019604	Diet:Glycerol feeding | Dose:6 g/kg	
#SUBJECT
SU:SUBJECT_TYPE                   	MOUSE
SU:SUBJECT_SPECIES                	Mus musculus
SU:TAXONOMY_ID                    	10090
#COLLECTION
CO:COLLECTION_SUMMARY             	-
#TREATMENT
TR:TREATMENT_SUMMARY              	-
#SAMPLEPREP
SP:SAMPLEPREP_SUMMARY             	-
SP:SAMPLEPREP_PROTOCOL_FILENAME   	A007 - Short Chain Fatty Acids.pdf
#CHROMATOGRAPHY
CH:CHROMATOGRAPHY_TYPE            	
CH:INSTRUMENT_NAME                	GC_7890N MS_5975 (Agilent)
CH:COLUMN_NAME                    	 ()
CH:METHODS_FILENAME               	WAXPLUS_100-200C_3_SPLITLESS_SIM.M
#ANALYSIS
AN:ANALYSIS_TYPE                  	MS
AN:INSTRUMENT_NAME                	GC_7890N MS_5975 (Agilent)
AN:ANALYSIS_PROTOCOL_FILE         	A007 - Short Chain Fatty Acids.pdf
AN:ACQUISITION_PARAMETERS_FILE    	WAXPLUS_100-200C_3_SPLITLESS_SIM.M
AN:PROCESSING_PARAMETERS_FILE     	-
#MS
MS:INSTRUMENT_TYPE                	Q
MS:MS_TYPE                        	EI
MS:ION_MODE                       	POSITIVE
#MS_METABOLITE_DATA
MS_METABOLITE_DATA:UNITS	uM
MS_METABOLITE_DATA_START
Sample	S00019591	S00019592	S00019593	S00019594	S00019595	S00019596	S00019597	S00019598	S00019599	S00019600	S00019601	S00019602	S00019603	S00019604
Factors	Diet:GTA feeding | Dose:0.1 g/kg	Diet:GTA feeding | Dose:0.1 g/kg	Diet:GTA feeding | Dose:0.1 g/kg	Diet:Glycerol feeding | Dose:0.1 g/kg	Diet:Glycerol feeding | Dose:0.1 g/kg	Diet:GTA feeding | Dose:1 g/kg	Diet:GTA feeding | Dose:1 g/kg	Diet:Glycerol feeding | Dose:1 g/kg	Diet:Glycerol feeding | Dose:1 g/kg	Diet:GTA feeding | Dose:6 g/kg	Diet:GTA feeding | Dose:6 g/kg	Diet:GTA feeding | Dose:6 g/kg	Diet:Glycerol feeding | Dose:6 g/kg	Diet:Glycerol feeding | Dose:6 g/kg
PROPIONIC ACID	24.81893863	8.882650006	10.47848455	16.04074196	14.16516278	10.55334426	11.66915486	3.456446872	6.214108481	10.2852588	13.74932725	17.2947379	21.83593369	5.853698314
ISOVALERIC ACID	1.881999495	.522323663	.754458575	.775784263	1.043907708	1.173535206	.784942131	.712418983	.821966021	.504474636	.472823137	.409916158	.593808801	.344748153
ACETIC ACID	1763.187168	365.8119608	465.5062032	290.2580833	453.0147872	397.9395878	470.3317929	165.4069578	193.0739517	113.9581219	133.6742185	172.8862603	173.9005748	220.924319
BUTYRIC ACID	11.9190315	2.191449034	5.912408489	14.01194373	9.362627466	11.56803807	6.873936887	0	1.158969888	.115006942	1.689545651	2.77689211	1.439247435	.497869662
OCTANOIC ACID	4.111795061	.589768524	.332557254	1.722552599	.769693625	.977356984	.694545711	.457941299	.369022945	.478645499	.404122891	.312673464	.507050378	.646897472
VALERIC ACID	3.314285872	.730922331	.427909924	2.04708648	.321731635	1.085482308	1.413326564	.510097201	.168573821	.336845115	.310681754	.13317533	.283009154	.378116012
MS_METABOLITE_DATA_END
#METABOLITES
METABOLITES_START
metabolite_name	moverz_quant	ri	ri_type	pubchem_id	inchi_key	kegg_id	other_id	other_id_type
PROPIONIC ACID				1032				
ISOVALERIC ACID				10430				
ACETIC ACID				176				
BUTYRIC ACID				264				
OCTANOIC ACID				379				
VALERIC ACID				7991				
METABOLITES_END
