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MB Sample ID: SA091007
| Local Sample ID: | 101905 |
| Subject ID: | SU001318 |
| Subject Type: | Mammal |
| Subject Species: | Mus musculus |
| Taxonomy ID: | 10090 |
| Gender: | Male and female |
Select appropriate tab below to view additional metadata details:
Subject:
| Subject ID: | SU001318 |
| Subject Type: | Mammal |
| Subject Species: | Mus musculus |
| Taxonomy ID: | 10090 |
| Gender: | Male and female |
Factors:
| Local Sample ID | MB Sample ID | Factor Level ID | Level Value | Factor Name |
|---|---|---|---|---|
| 101905 | SA091007 | FL013117 | Control | Treatment |
Collection:
| Collection ID: | CO001312 |
| Collection Summary: | Cecal contents of DSS-treated and control mice were harvested. |
| Sample Type: | Feces |
Treatment:
| Treatment ID: | TR001333 |
| Treatment Summary: | SPF C57BL/6 mice were originally purchased from Jackson Laboratories. Mice were treated with 1.5% DSS for 5 days. |
Sample Preparation:
| Sampleprep ID: | SP001326 |
| Sampleprep Summary: | Fecal samples were lyophilized using a VD-800R lyophilizer (TAITEC) for 24 hours. Freeze-dried feces were disrupted with 3.0-mm Zirconia Beads (Biomedical Science) by vigorous shaking (1,500 rpm for 10 min) using Shake Master (Biomedical Science). Fecal metabolites were extracted using the methanol:chloroform:water extraction protocol. |
Combined analysis:
| Analysis ID | AN002075 | AN002076 |
|---|---|---|
| Analysis type | MS | MS |
| Chromatography type | CE | CE |
| Chromatography system | Agilent CE | Agilent CE |
| Column | Fused-silica,50um(cation) | COSMO(+),50um(anion) |
| MS Type | ESI | ESI |
| MS instrument type | Other | Other |
| MS instrument name | Agilent CE-TOFMS | Agilent CE-TOFMS |
| Ion Mode | POSITIVE | NEGATIVE |
| Units | nmol/g | nmol/g |
Chromatography:
| Chromatography ID: | CH001512 |
| Instrument Name: | Agilent CE |
| Column Name: | Fused-silica,50um(cation) |
| Internal Standard: | 20 μM of methionine sulfone |
| Chromatography Type: | CE |
| Chromatography ID: | CH001513 |
| Instrument Name: | Agilent CE |
| Column Name: | COSMO(+),50um(anion) |
| Internal Standard: | 20 μM of D-camphor-10-sulfonic acid (CSA) |
| Chromatography Type: | CE |
MS:
| MS ID: | MS001926 |
| Analysis ID: | AN002075 |
| Instrument Name: | Agilent CE-TOFMS |
| Instrument Type: | Other |
| MS Type: | ESI |
| MS Comments: | In-house software (MasterHands) was used for peak area integration and annotation. |
| Ion Mode: | POSITIVE |
| MS ID: | MS001927 |
| Analysis ID: | AN002076 |
| Instrument Name: | Agilent CE-TOFMS |
| Instrument Type: | Other |
| MS Type: | ESI |
| MS Comments: | In-house software (MasterHands) was used for peak area integration and annotation. |
| Ion Mode: | NEGATIVE |
